BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0064.0008.p         (259 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

slr1870 [S] COG1432 Uncharacterized conserved protein Syn Synech...   194   2e-49
TP0894 Non COG                                                        139   7e-33
Cj0189c [S] COG1432 Uncharacterized conserved protein Cje Campyl...   119   9e-27

>slr1870 [S] COG1432 Uncharacterized conserved protein Syn Synechocystis
          Length = 249

 Score =  194 bits (493), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 136/233 (58%), Gaps = 7/233 (3%)

Query: 9   RLAVLIDADNASAKIADGLFEEIAKIGEASVRRIYGDFSNPRSKGWADILSKHAIIPQQQ 68
            +A+LIDADNA A   + +  EIAK G A++R+ YG++ +P  K W + L ++AI P QQ
Sbjct: 7   NIALLIDADNAPASKIEAIVSEIAKYGVANIRKAYGNWKSPNLKAWEECLHEYAIRPVQQ 66

Query: 69  FAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIREHGIDVFGFGEQK 128
           F YT GKNA+D  ++IDAMDLL++ R D F +VSSD DFT L  RI  +G+ V+GFGE+K
Sbjct: 67  FDYTKGKNATDAAMIIDAMDLLYTQRLDAFAIVSSDCDFTPLVMRILTNGLKVYGFGEKK 126

Query: 129 TPESFRQACRRFVY------TENLRGGAPSNQDAAVRAQPLQPPEAATPIIKKVISQMAS 182
           TP  F  AC  F+Y       EN  G   S+       + L+       +++  IS    
Sbjct: 127 TPLPFVYACSTFLYLESIDQIENSEGATQSSTSVKKTGKELKQDAKLISLLRSAISSTID 186

Query: 183 EDGWVTLGEVGRQLANFASDFDQRTYGFRTLGELVRRTNAFEIESKGGTMRIR 235
           +DGW +L E+G  + N AS FD R YG+  L  L    + FEIE K   + +R
Sbjct: 187 DDGWSSLAEIGGHIKNQAS-FDSRNYGYAKLSSLFEAIDLFEIERKNRAIYVR 238


>TP0894 Non COG
          Length = 340

 Score =  139 bits (350), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 131/238 (55%), Gaps = 21/238 (8%)

Query: 9   RLAVLIDADNASAKIADGLFEEIAKIGEASVRRIYGDFSNPRSKGWADILSKHAIIPQQQ 68
           + A+LID DN S K  +G+  E++K G+  VRR+YGD++ P   GW  +L+K  I P QQ
Sbjct: 4   KFALLIDGDNISPKFLEGIVGEVSKEGDIHVRRVYGDWTTPNMNGWKGLLTKIPIRPVQQ 63

Query: 69  FAYTTGKNASDITLVIDAMDLLHSGR-FDGFCLVSSDSDFTRLAARIREHGIDVFGFGEQ 127
           F Y  G NA+D T++++A++L ++ R  +  C+ S+DSD+  LA ++RE+G+ V G G++
Sbjct: 64  FRY--GDNATDNTIIMEAIELANNNRAINAVCIASTDSDYYSLALKLREYGLYVLGIGKR 121

Query: 128 KTPESFRQACRRFVYTEN-------LRGGAPSNQDAAVRAQPLQPPEAATP-----IIKK 175
              E +  AC  F Y EN       L  G   + ++   A P    +A         + K
Sbjct: 122 NAREIWVSACNEFKYIENIETEHFGLSAGFAFHTESDAAAVPGAGVDAVEEDTGGFDLGK 181

Query: 176 VISQM-----ASEDGWVTLGEVGRQLANFASDFDQRTYGFRTLGELVRRT-NAFEIES 227
           +I+        +E+GWV+L  +G+ L     +FD R+Y   TL E+V      FE++S
Sbjct: 182 LIAHAYRNSRMTEEGWVSLSNLGKSLRITKPEFDPRSYNHSTLREMVEALPELFEVQS 239


>Cj0189c [S] COG1432 Uncharacterized conserved protein Cje Campylobacter
           jejuni
          Length = 232

 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 11/215 (5%)

Query: 5   LRSPRLAVLIDADNASAKIADGLFEEIAKIGEASVRRIYGDFSNPRSKGWADILSKHAII 64
           + +  +A+ IDA+N  AK A  +F+  +  GE  ++RIYGD++    +GW + ++++++I
Sbjct: 1   MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQKNIQGWREQIAEYSLI 60

Query: 65  PQQQFAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIREHGIDVFGF 124
             QQF +   KN+SD+ L+ + M + +    D F +VSSDSD+T L  ++RE+   V G 
Sbjct: 61  AMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYTSLIQKLRENKKQVIGM 120

Query: 125 GEQKTPESFRQACRRFVYTENLRGGAPSNQDAAVRAQPLQPPEAATPIIKKVISQMASED 184
           G +K+ +S+  A   F Y +         +D + +   L        I   +  Q+  E 
Sbjct: 121 GLEKSIKSYVNAFSEFFYLD---------KDESKKEDILSKDYLRALI--NITEQLIDEK 169

Query: 185 GWVTLGEVGRQLANFASDFDQRTYGFRTLGELVRR 219
           G     ++   +    SDF  + YGF+    L+++
Sbjct: 170 GRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQK 204