BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0061.0002.p         (315 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSO2127 [GEPR] COG0477 Permeases of the major facilitator superf...    68   2e-11
AF0367 [GEPR] COG0477 Permeases of the major facilitator superfa...    62   2e-09

>SSO2127 [GEPR] COG0477 Permeases of the major facilitator superfamily Sso
           Sulfolobus solfataricus
          Length = 430

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 8/146 (5%)

Query: 145 GFQMAALTFAISLDRIFDGFGRPFFGWVSDNIGREHTMFIAFGTGALMLLTLSTWGHNPV 204
           GF +AA+  A+ L    +G GR   G VSD +GR +TM ++FG   + +L+++     P 
Sbjct: 262 GFSIAAVI-AVFLFPFANGLGRFVMGTVSDYLGRPYTMTLSFGISGISMLSIA---FIPK 317

Query: 205 VFVLATAVYF---GVFGEIYSLFPATCGDTFGSKFATTNNGMLYTAKGTAALLV-PAASI 260
           +  L  A+ F     +G ++SLFP   GD +G K +  N G+ YTAK  A +     ASI
Sbjct: 318 IASLYLALIFLTAFTWGPLFSLFPPLVGDYYGPKHSGANYGLTYTAKALAGIFAGYGASI 377

Query: 261 VAASYGWQAVFVIAVALNATAALMAL 286
           +  SYG +   +I  ++   +A++AL
Sbjct: 378 LFTSYGIKETLIITGSMAIMSAILAL 403


>AF0367 [GEPR] COG0477 Permeases of the major facilitator superfamily Afu
           Archaeoglobus fulgidus
          Length = 397

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 2/146 (1%)

Query: 145 GFQMAALTFAISLDRIFDGFGRPFFGWVSDNIGREHTMFIAFGTGALMLLTLSTWGHNPV 204
           G +  A  FA+S+  + +  GRP  G +SD IGR  TMF+ F    + L+         +
Sbjct: 249 GLEPLAAAFAVSILSVANAVGRPGAGALSDKIGRAMTMFVLFLIQGITLIAFPHVALTLI 308

Query: 205 VFVLATAVYFGVFGEIYSLFPATCGDTFGSKFATTNNGMLYTAKGTAALLVP--AASIVA 262
              +  A+    +G  +SLFP+  GD FG+K    N G+++T+ G   L+ P  A  +  
Sbjct: 309 TIYICAAIIGFNYGANFSLFPSATGDFFGTKNLGVNYGLVFTSYGVGGLVGPIMAGYVFD 368

Query: 263 ASYGWQAVFVIAVALNATAALMALFV 288
            +  ++  F++A  L   AA M+  +
Sbjct: 369 VTGSYEIAFLVAGVLALIAAFMSFLL 394