BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0060.0001.p         (65 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr1703m [C] COG1529 Aerobic-type carbon monoxide dehydrogenase,...    94   6e-20

>mlr1703m [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large
           subunit CoxL/CutL homologs Mlo Mesorhizobium loti
          Length = 791

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 1   VALSSIDLGQGMKSVTRQICAETLRXVED-VYVDTADSDTGPHCMGSFASRGTHRVGNAV 59
           V LSS+DLGQGMK +  QICAET+    D V VDTAD+DTGPHCMG+FASRGTHR GNAV
Sbjct: 496 VTLSSVDLGQGMKQIMAQICAETIGVPTDRVVVDTADTDTGPHCMGTFASRGTHRAGNAV 555

Query: 60  MAAA 63
           + AA
Sbjct: 556 IQAA 559