BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0261.p (299 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll0705 [G] COG1175 ABC-type sugar transport systems, permease c... 422 e-118 AGl1909 [G] COG1175 ABC-type sugar transport systems, permease c... 421 e-117 SMc02517 [G] COG1175 ABC-type sugar transport systems, permease ... 414 e-115 RSc3048 [G] COG1175 ABC-type sugar transport systems, permease c... 374 e-103 BH1245 [G] COG1175 ABC-type sugar transport systems, permease co... 128 2e-29 >mll0705 [G] COG1175 ABC-type sugar transport systems, permease components Mlo Mesorhizobium loti Length = 288 Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/293 (74%), Positives = 251/293 (85%), Gaps = 6/293 (2%) Query: 1 MDKT-VXKAWFLVLPVFLVVAFSAVLPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDPS 59 MDKT KAWFLVLPV ++VAF+AV+PLMTVVNYS+QDTFGNN F W G WF++LL S Sbjct: 1 MDKTWNNKAWFLVLPVLVLVAFTAVIPLMTVVNYSVQDTFGNNVFTWAGTEWFEDLLSSS 60 Query: 60 TDLGGRFLASLGRNLFFSAVILAIEVPLGIIVALSMPREGWGVAACLVILALPLLIPWNV 119 RF ++ RNL FS +ILAI+VPLGI +AL+MP++GWGV CLV+++LPLLIPWNV Sbjct: 61 -----RFWEAMVRNLIFSFIILAIQVPLGIFIALNMPKKGWGVPVCLVLMSLPLLIPWNV 115 Query: 120 VGTIWQIFGRPDIGLLGYVLNHLGLNYNYVSNEVDAWVTVIVMDVWHWTSLVALLCYAGL 179 VGTIWQ+FGR DIGLLGY +N LG+++NYV + DAWV +IVMDVWHWTSLV LLCYAGL Sbjct: 116 VGTIWQVFGRNDIGLLGYYVNALGIDFNYVQHAFDAWVIIIVMDVWHWTSLVVLLCYAGL 175 Query: 180 KSIPDAYYQAAQIDGASRWAVFKAIQLPKMNRVLLIAVLLRFMDSFMIYTEPFVVTGGGP 239 SIPDA+YQAA+IDGASRWAVF+ IQLPKM RVLLIAVLLRFMDSFMIYTEPFVVTGGGP Sbjct: 176 VSIPDAFYQAAKIDGASRWAVFRYIQLPKMQRVLLIAVLLRFMDSFMIYTEPFVVTGGGP 235 Query: 240 GNSTTFVSIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTVMVNAGSER 292 GNSTTF+SI+LVK ALGQFDLG AAA+SLVY LIIL++ WVFYTVM N +ER Sbjct: 236 GNSTTFLSIDLVKTALGQFDLGPAAAMSLVYFLIILLLSWVFYTVMTNYDAER 288 >AGl1909 [G] COG1175 ABC-type sugar transport systems, permease components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 288 Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/285 (75%), Positives = 248/285 (87%), Gaps = 5/285 (1%) Query: 7 KAWFLVLPVFLVVAFSAVLPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDPSTDLGGRF 66 KAWF+VLPV ++VAFSAV+PLMTVVNYS+QDTFGNNQFFW G WF+E+L S+D RF Sbjct: 8 KAWFMVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNQFFWAGTQWFQEIL--SSD---RF 62 Query: 67 LASLGRNLFFSAVILAIEVPLGIIVALSMPREGWGVAACLVILALPLLIPWNVVGTIWQI 126 +LGRNL FS +ILAIE+PLGI +AL MP+ G GV CLV +ALPLL+PWNVVGTIWQ+ Sbjct: 63 WNALGRNLVFSGIILAIEIPLGIFIALKMPKSGIGVPICLVTMALPLLVPWNVVGTIWQV 122 Query: 127 FGRPDIGLLGYVLNHLGLNYNYVSNEVDAWVTVIVMDVWHWTSLVALLCYAGLKSIPDAY 186 FGR DIGLLGY N LGL+YNYV++ VDAW+TV++MDVWHWTSLV LLCYA L SIPDAY Sbjct: 123 FGRSDIGLLGYYANQLGLDYNYVNDPVDAWITVVIMDVWHWTSLVVLLCYASLVSIPDAY 182 Query: 187 YQAAQIDGASRWAVFKAIQLPKMNRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTTFV 246 YQAA+IDGASR+AVF+ IQLPKM RVLLIA LLRFMDSFMIYTEPFVVTGGGPGNSTTF+ Sbjct: 183 YQAARIDGASRFAVFRFIQLPKMKRVLLIAFLLRFMDSFMIYTEPFVVTGGGPGNSTTFL 242 Query: 247 SIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTVMVNAGSE 291 SI+LVK+ALGQFDLG AAA+SL+Y LIIL++ WVFYTVM + +E Sbjct: 243 SIDLVKMALGQFDLGPAAAMSLIYFLIILLLSWVFYTVMTSHDAE 287 >SMc02517 [G] COG1175 ABC-type sugar transport systems, permease components Sme Sinorhizobium meliloti Length = 288 Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust. Identities = 213/292 (72%), Positives = 250/292 (85%), Gaps = 6/292 (2%) Query: 1 MDKT-VXKAWFLVLPVFLVVAFSAVLPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDPS 59 M+KT KAWF+VLPV ++VAFSAV+PLMTVVNYS+QDTFGNN+FFW G WF ++L+ Sbjct: 1 MEKTWNNKAWFMVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNEFFWAGTDWFLDVLESD 60 Query: 60 TDLGGRFLASLGRNLFFSAVILAIEVPLGIIVALSMPREGWGVAACLVILALPLLIPWNV 119 RF +L RNL FSA+ILAIE+PLGI++AL+MP+ G GV CLV++ALPLLIPWNV Sbjct: 61 -----RFWDALTRNLIFSAIILAIEIPLGIVIALNMPKRGIGVPICLVLMALPLLIPWNV 115 Query: 120 VGTIWQIFGRPDIGLLGYVLNHLGLNYNYVSNEVDAWVTVIVMDVWHWTSLVALLCYAGL 179 VGTIWQ+FGR DIGLLG L LG+NYNYV N +DAWVT+IVMDVWHWTSLV LLCYAGL Sbjct: 116 VGTIWQVFGRVDIGLLGRTLASLGINYNYVQNPLDAWVTLIVMDVWHWTSLVVLLCYAGL 175 Query: 180 KSIPDAYYQAAQIDGASRWAVFKAIQLPKMNRVLLIAVLLRFMDSFMIYTEPFVVTGGGP 239 SIPDAYYQAA+IDGASRW+VF+ IQLPKM RVLLIA LLRFMDSFMIYTEPFVVTGGGP Sbjct: 176 VSIPDAYYQAAKIDGASRWSVFRYIQLPKMKRVLLIAFLLRFMDSFMIYTEPFVVTGGGP 235 Query: 240 GNSTTFVSIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTVMVNAGSE 291 GNSTTF+SI+LVK A+GQFDLG AAALS++Y LIIL++ W+FYTVM + ++ Sbjct: 236 GNSTTFLSIDLVKTAIGQFDLGPAAALSIIYFLIILLLSWIFYTVMTTSDAQ 287 >RSc3048 [G] COG1175 ABC-type sugar transport systems, permease components Rso Ralstonia solanacearum Length = 296 Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/288 (65%), Positives = 225/288 (78%), Gaps = 5/288 (1%) Query: 7 KAWFLVLPVFLVVAFSAVLPLMTVVNYSMQDTFGNNQFFWNGVGWFKELLDPSTDLGGRF 66 KAWFL+LPVFL VAFSA+LPLMTVVNYS+QD Q + GV WF+++L G Sbjct: 8 KAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILR-----DGDL 62 Query: 67 LASLGRNLFFSAVILAIEVPLGIIVALSMPREGWGVAACLVILALPLLIPWNVVGTIWQI 126 +L R L FS +L +E+PLGI +AL+MP +GW +A LVILA+PLLIPWNVVGTIWQI Sbjct: 63 QDALTRQLIFSLCVLGVEIPLGIGLALAMPSKGWKASAALVILAMPLLIPWNVVGTIWQI 122 Query: 127 FGRPDIGLLGYVLNHLGLNYNYVSNEVDAWVTVIVMDVWHWTSLVALLCYAGLKSIPDAY 186 FGR DIGL GY LN LG++Y+Y S+ DAW+TV++MDVWHWT LVALL YAGL+SIPDA+ Sbjct: 123 FGRSDIGLAGYWLNRLGVDYSYTSHPFDAWITVLIMDVWHWTPLVALLAYAGLRSIPDAF 182 Query: 187 YQAAQIDGASRWAVFKAIQLPKMNRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTTFV 246 YQAA+IDGASR AVF+ IQLPKM VL+I VLLRFMDSFMIYTEPFV+TGGGPGN+TTF+ Sbjct: 183 YQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATTFL 242 Query: 247 SIELVKIALGQFDLGKAAALSLVYNLIILIVCWVFYTVMVNAGSERPA 294 S L + A+GQFDLG AAA S+VY LIIL+ C+V Y M GS A Sbjct: 243 SQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASTA 290 >BH1245 [G] COG1175 ABC-type sugar transport systems, permease components Bha Bacillus halodurans Length = 445 Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 122/221 (55%), Gaps = 3/221 (1%) Query: 64 GRFLASLGRNLFFSAVILAIEVPLGIIVALSMPREGWGVAACLVILALPLLIPWNVVGTI 123 R A++ LFF+ V +A E+ LG+ +AL + R G V + +P IP V + Sbjct: 209 SRMWAAMSNTLFFTVVSVAAELVLGLAIALLINRTFKGRGLVRVAVLIPWAIPTAVAAMM 268 Query: 124 WQIFGRPDIGLLGYVLNHLGLNYNY---VSNEVDAWVTVIVMDVWHWTSLVALLCYAGLK 180 W+ G++ + LGL + +S A ++I DVW T +ALL AGL+ Sbjct: 269 WRYLYDGQFGVIAHYFEQLGLISDSSVLLSTGAGAMFSIIFADVWKTTPYMALLLLAGLQ 328 Query: 181 SIPDAYYQAAQIDGASRWAVFKAIQLPKMNRVLLIAVLLRFMDSFMIYTEPFVVTGGGPG 240 +IP++ Y+AA++DGA+R F I LP + +L+A+L R +D+F ++ FV+TGGGP Sbjct: 329 TIPNSLYEAAKVDGANRIQTFFKITLPLLKSAILVALLFRTLDAFRVFDLIFVLTGGGPA 388 Query: 241 NSTTFVSIELVKIALGQFDLGKAAALSLVYNLIILIVCWVF 281 NST +SI + Q + G +ALS++ L + ++ + F Sbjct: 389 NSTESISIYAYRTLFSQQNFGAGSALSVIVFLSVALISFAF 429