BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0241.p (329 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc1364 [S] COG3214 Uncharacterized protein conserved in bacteri... 135 2e-31 SMc00961 [S] COG3214 Uncharacterized protein conserved in bacter... 125 1e-28 ZycaQ [S] COG3214 Uncharacterized protein conserved in bacteria ... 115 2e-25 ECs0999 [S] COG3214 Uncharacterized protein conserved in bacteri... 115 2e-25 STM0986 [S] COG3214 Uncharacterized protein conserved in bacteri... 113 5e-25 >AGc1364 [S] COG3214 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 398 Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 36/351 (10%) Query: 1 VIERCHHHILFTRIPDYRRADLKQAQSRDKSVFEYWTHALSYVPSKDIGIFLPAMKAHKR 60 +ER HH I+F+R YRR L +D+++FE+WTH S VP++ F P K R Sbjct: 50 TVERAHHQIIFSRNQTYRRDHLTTLLEKDRALFEHWTHDASIVPTE----FYPYWKHRFR 105 Query: 61 E--------GHKWFSSVTPADTRKVL-RLLRAGPLTIRDIDDDVLTEKEHLWQSRKPSKR 111 KW A + L R+ GP+ R++ ++ + W + PSK Sbjct: 106 RREPIIQERWRKWHGEGFDAAFGETLERIAATGPVLARELKEE--GHQSGGWWNWHPSKT 163 Query: 112 ALQLAFYGGVVTISERAGMLKTYELMTRHFGWDKPPASARTAYLLDRALRSQGIVSLDSI 171 AL+ ++ G + I+ R K Y+L R + A +D A R Q + L Sbjct: 164 ALEYLWHTGKLAIAGRVNFQKVYDLAERVIPGEHHETEVEHAEFVDWACR-QALKRLGFA 222 Query: 172 CH------LDAPSKKAVRSLIEARLRRKELVQVALEGAGKQEHWARPEVLEATGEGDPT- 224 H D + + R +++ R EL +V+L + + ARP A D T Sbjct: 223 THGEIAAFFDLVTPQEARDWVKSH--RDELCEVSLFSSDGET--ARPSFAFADFTADLTD 278 Query: 225 ------LVHILSPFDPLIIQRKRTELFFGYGHRFEAYVPKEKRLFGYFALPVLVGDDIVA 278 V +LSPFDPL+ R RTE FG+ +R E +VP+ KR +GY+ P+L GD ++ Sbjct: 279 VPEPSSRVRVLSPFDPLLRDRNRTERLFGFYYRIEVFVPEPKRQYGYYVFPLLEGDRVIG 338 Query: 279 ALDLKTDRQNKKLLMQKWSWVGTGKKQAARKELKRRIEEELDRFERFQLAE 329 +D+K DR+ L +++ W+ G + +A + K ++ EL R RF E Sbjct: 339 RIDMKADRKRSTLDVRR-LWLEPGVRASAGRLEK--LDAELVRLARFTGVE 386 >SMc00961 [S] COG3214 Uncharacterized protein conserved in bacteria Sme Sinorhizobium meliloti Length = 399 Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/349 (29%), Positives = 156/349 (44%), Gaps = 32/349 (9%) Query: 1 VIERCHHHILFTRIPDYRRADLKQAQSRDKSVFEYWTHALSYVPSKDIGIFLPAMKAHKR 60 +ER HH ILF+R YRR L + +D +FE+WTH S +PS F+ K Sbjct: 50 TVERAHHQILFSRNQTYRREHLAELLEKDGELFEHWTHDASIIPST---FFIYWKHRFKW 106 Query: 61 EGH-------KWFSSVTPADTRKVL-RLLRAGPLTIRDIDDDVLTEKEHLWQSRKPSKRA 112 E KW A + R+ G + R + +D + W + PSK A Sbjct: 107 ESETLRERWRKWRGEDFDAGCEETYARIANNGAVMARHLKED--GHESGGWWNWHPSKTA 164 Query: 113 LQLAFYGGVVTISERAGMLKTYELMTRHFGWDKPPASARTAYLLDRALRSQ----GIVSL 168 L++ + G + I+ R K Y+L R +D A RS G + Sbjct: 165 LEVLWRQGKLAIARRENFQKVYDLTERVIPARHYDGEVAHEEFIDWACRSALERLGFATH 224 Query: 169 DSICHL-DAPSKKAVRSLIEARLRRKELVQVALEGAGKQEHWARPEVLEA---TGEGD-- 222 I D S + + A R EL ++ +E A + RP A G GD Sbjct: 225 GEIAAFWDLVSPDEAKDWVAAH--RDELCEIVIEPANGGK--PRPSFAFAGFPDGLGDIP 280 Query: 223 --PTLVHILSPFDPLIIQRKRTELFFGYGHRFEAYVPKEKRLFGYFALPVLVGDDIVAAL 280 P V +LSPFDPL+ R R E F + +R E +VP+ KR +GY+ P+L GD ++ + Sbjct: 281 DPPARVRVLSPFDPLLRDRNRAERLFDFFYRIEVFVPEPKREYGYYVFPLLEGDRMIGRI 340 Query: 281 DLKTDRQNKKLLMQKWSWVGTGKKQAARKELKRRIEEELDRFERFQLAE 329 D+K DR+ L +++ W+ G K ++ + ++ ELDR RF E Sbjct: 341 DMKADRKRGSLDVRR-LWLERGVKPSSGR--MEKLMAELDRIARFAGVE 386 >ZycaQ [S] COG3214 Uncharacterized protein conserved in bacteria EcZ Escherichia coli O157:H7 EDL933 Length = 410 Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 153/332 (46%), Gaps = 20/332 (6%) Query: 1 VIERCHHHILFTRIPDYRRADLKQAQSRDKSVFEYWTHALSYVPSKDIGIFLPAMKAHKR 60 ++ R + +LF+R+ +Y L ++ +R + + EYW H ++P D + M A ++ Sbjct: 51 IVARSPYLVLFSRLGNYPAQWLDESLARGE-LMEYWAHEACFMPRSDFRLIRHRMLAPEK 109 Query: 61 EGHKWFSSVTPADTRKVLRLLR----AGPLTIRDIDDDVLTEKEHLWQSRKPSKRALQLA 116 G K+ + ++ +L++ GP +R D + + W KP KR L+ Sbjct: 110 MGWKYKDAWMQEHEAEIAQLIQHIHDKGP--VRSADFEYPRKGASGWWEWKPHKRHLEGL 167 Query: 117 FYGGVVTISERAGMLKTYELMTRHF-GWDKP----PASARTAYLLDRALRSQGIVSLDSI 171 F G V + ER + Y+L R WD + +LD + RSQGI + Sbjct: 168 FTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSQGIFREQWL 227 Query: 172 CHLDAPSKKAVRSLIEARLRRKELVQVALEGAGKQEHWARPEVL---EATGEGDPTLVH- 227 + A+ + EAR +++++ V +E G W ++L E G T H Sbjct: 228 ADYYRLKRPALAAWREARAEQRQIIAVHVEKLGNL--WLHADLLPLLERALAGKLTATHS 285 Query: 228 -ILSPFDPLIIQRKRTELFFGYGHRFEAYVPKEKRLFGYFALPVLVGDDIVAALDLKTDR 286 +LSPFDP++ RKR E F + +R E Y P KR +GYF LP+L +V +D K R Sbjct: 286 AVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHR 345 Query: 287 QNKKL-LMQKWSWVGTGKKQAARKELKRRIEE 317 Q L ++ W G +K L++ I + Sbjct: 346 QTGILEVISLWLQEGIKPTTTLQKGLRQAITD 377 >ECs0999 [S] COG3214 Uncharacterized protein conserved in bacteria Ecs Escherichia coli O157:H7 Length = 410 Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 153/332 (46%), Gaps = 20/332 (6%) Query: 1 VIERCHHHILFTRIPDYRRADLKQAQSRDKSVFEYWTHALSYVPSKDIGIFLPAMKAHKR 60 ++ R + +LF+R+ +Y L ++ +R + + EYW H ++P D + M A ++ Sbjct: 51 IVARSPYLVLFSRLGNYPAQWLDESLARGE-LMEYWAHEACFMPRSDFRLIRHRMLAPEK 109 Query: 61 EGHKWFSSVTPADTRKVLRLLR----AGPLTIRDIDDDVLTEKEHLWQSRKPSKRALQLA 116 G K+ + ++ +L++ GP +R D + + W KP KR L+ Sbjct: 110 MGWKYKDAWMQEHEAEIAQLIQHIHDKGP--VRSADFEYPRKGASGWWEWKPHKRHLEGL 167 Query: 117 FYGGVVTISERAGMLKTYELMTRHF-GWDKP----PASARTAYLLDRALRSQGIVSLDSI 171 F G V + ER + Y+L R WD + +LD + RSQGI + Sbjct: 168 FTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSQGIFREQWL 227 Query: 172 CHLDAPSKKAVRSLIEARLRRKELVQVALEGAGKQEHWARPEVL---EATGEGDPTLVH- 227 + A+ + EAR +++++ V +E G W ++L E G T H Sbjct: 228 ADYYRLKRPALAAWREARAEQRQIIAVHVEKLGNL--WLHADLLPLLERALAGKLTATHS 285 Query: 228 -ILSPFDPLIIQRKRTELFFGYGHRFEAYVPKEKRLFGYFALPVLVGDDIVAALDLKTDR 286 +LSPFDP++ RKR E F + +R E Y P KR +GYF LP+L +V +D K R Sbjct: 286 AVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHR 345 Query: 287 QNKKL-LMQKWSWVGTGKKQAARKELKRRIEE 317 Q L ++ W G +K L++ I + Sbjct: 346 QTGILEVISLWLQEGIKPTTTLQKGLRQAITD 377 >STM0986 [S] COG3214 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 410 Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 31/311 (9%) Query: 1 VIERCHHHILFTRIPDYRRADLKQAQSRDKSVFEYWTHALSYVPSKDIGIFLPAMKAHKR 60 V+ R + +LF+R+ Y +A L +A R + + EYW H ++P +D + M + ++ Sbjct: 51 VVARSPYLVLFSRLGSYPQAWLDEALRRGE-LMEYWAHEACFLPRRDFKLIRHRMLSPEK 109 Query: 61 EGHKWFSSVTPADTRKVLRLLRA----GPLTIRDIDDDVLTEKEHLWQSRKPSKRALQLA 116 G K+ ++ ++ +L+R GP +R D + + W KP KR L+ Sbjct: 110 MGWKYHAAWMHEHAEEIEQLVRHIQEHGP--VRSADFEHAQKGASGWWEWKPHKRHLEGL 167 Query: 117 FYGGVVTISERAGMLKTYELMTRHFG-WDKP----PASARTAYLLDRALRSQGIVS---L 168 F G V + ER + Y+L R WD S +LD + RS GI L Sbjct: 168 FTAGKVMVVERRNFQRVYDLTPRVMPHWDDERDGLSQSQAENLMLDNSARSLGIFREQWL 227 Query: 169 DSICHLDAPSKKAVRSLIEARLRRKELVQVALEGAGKQEHWARPEVLEATGEGDPTLVH- 227 L P K R E+R +++++ V +E G+ W ++L + +P L + Sbjct: 228 ADYYRLKRPDLKGWR---ESRAEQQQIIPVEVETLGRM--WLHADLL---SQLEPALNNA 279 Query: 228 -------ILSPFDPLIIQRKRTELFFGYGHRFEAYVPKEKRLFGYFALPVLVGDDIVAAL 280 +LSPFDP++ RKR FG+ +R E Y P KR +GYF LP+L +V + Sbjct: 280 LKATHSAVLSPFDPVVWDRKRATQLFGFNYRLECYTPAAKRQYGYFVLPLLYLGRLVGRM 339 Query: 281 DLKTDRQNKKL 291 D K R+ L Sbjct: 340 DAKMHRKTGVL 350