BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0232.p         (172 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0220 [G] COG4101 Predicted mannose-6-phosphate isomerase Rso ...   219   2e-57
XF2088 [G] COG4101 Predicted mannose-6-phosphate isomerase Xfa X...    60   3e-09

>RSc0220 [G] COG4101 Predicted mannose-6-phosphate isomerase Rso Ralstonia
           solanacearum
          Length = 156

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 102/148 (68%), Positives = 116/148 (78%)

Query: 21  WKHDGVRVIPGNQLDPNVPSTAGMDRKAAINFARVGAQKLWAGTVSIKPDAKTGAHHHGH 80
           W+  GV+VIPG+QLD N P T GM R AAI  AR GA KLWAG V+I  +AKTGAHHHG 
Sbjct: 9   WREHGVQVIPGSQLDLNTPQTPGMTRAAAITQARTGASKLWAGAVTIDANAKTGAHHHGE 68

Query: 81  LESIIYVVKGKARMRWGEKLQFTAEAGPGDFIFVPPYVPHQEINASPDEVLECVLVRSDG 140
           LES+IYVV G+ARMRWG  L+FTAEAGPGDFI+VPP+VPHQEINASP E L CV+VRS  
Sbjct: 69  LESVIYVVSGRARMRWGNHLEFTAEAGPGDFIYVPPFVPHQEINASPTETLSCVIVRSGQ 128

Query: 141 EAVAINLDIEPVEKPENVLWVDPVHRHP 168
           E V +NLDI P E P+ V WVDP+H HP
Sbjct: 129 EPVVVNLDITPAEPPQTVYWVDPIHPHP 156


>XF2088 [G] COG4101 Predicted mannose-6-phosphate isomerase Xfa Xylella
           fastidiosa 9a5c
          Length = 205

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 43  GMDRKAAINFARVGAQKLWAGTVSIKPDAKTGAHHHGHLESIIYVVKGKARMRWGEKLQF 102
           G+D    I+   VGA  +    V+I P AK   H H   E+ IY + G + + +G +L+ 
Sbjct: 92  GLDYAVGISAETVGATVINLQLVTIAPGAKAKTHMHAGHETAIYALTGVSHVWYGSRLEE 151

Query: 103 TAEAGPGDFIFVPPYVPHQEINASPDEVLECVLVRSD 139
            A   PGDF ++P  VPHQ  N S +E    ++ RSD
Sbjct: 152 HATVVPGDFFYIPAGVPHQPYNNS-NEPAVVLVARSD 187