BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0183.p (1371 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1545 [T] COG5001 Predicted signal transduction protein contai... 307 1e-82 PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa 278 5e-74 all1175_4 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 273 3e-72 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 268 6e-71 SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti 266 3e-70 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 184/449 (40%), Positives = 269/449 (59%), Gaps = 20/449 (4%) Query: 906 KADERIEYLASHDSLTNLPNRETFNEMLHHAISAADRHRRQLAVLFIDLDRFKVINDSLG 965 +A+ RI LA +D+LT L NR F E L ++A + +L +L+IDLD FK++ND+ G Sbjct: 333 EAENRIRQLAHYDTLTGLANRTNFREQLDARLAAPEA---RLGLLYIDLDGFKLVNDTKG 389 Query: 966 HDAGDMLLVAIAGRLQGSL-RASDVVARLGGDEFVVILEETTERDDVER---IAGDLLIS 1021 H AGD LL +A RL+ R +ARLGGDEF V++ DD +R +A L+ + Sbjct: 390 HRAGDALLERVAQRLRAVCDRPGMAIARLGGDEFAVLVPH----DDADRAATLATALIEA 445 Query: 1022 LSQPLTISGHE-CHTTASVGIAMYPADGSDVQTLTKNADMAMYLAKEDGKNGFRFFSNEI 1080 L P + + AS+GIA+ PA G D + L AD+A+Y AK GK R F ++ Sbjct: 446 LGAPYALGADQNVRIGASIGIALAPAHGRDTENLLARADIALYAAKAAGKGLARLFCADM 505 Query: 1081 RAQSIERLTMESALRRALE-RNQFSLDYQPKVDMASGAISGVEALLRWTHPELGKVSPGQ 1139 + R +E+ LR ALE +++ + YQP VD+A+G ++ EAL+RW H E G V P + Sbjct: 506 ETRIQARALLEAQLRAALEHQDRLFVFYQPIVDVATGKVTAREALVRWHHAERGWVPPDE 565 Query: 1140 FIPLAEEIGLIVPIGRWVLKEACAQNMAWQRRGLRAVTMAVNLSPRQFGDPNLLDDIDAA 1199 F+P+AE+ GLI +GR+VL AC + W+ G R +AVN+SP Q G L + AA Sbjct: 566 FVPIAEQSGLIDQLGRFVLHRACREATRWED-GAR---VAVNVSPMQLGKATLAQTVHAA 621 Query: 1200 LEKSGMSPALLQLEVTESMVMRNVTRAVRVLDAIQNRGIRLAIDDFGTGYSSMSLMKQFP 1259 L SG++P L++EVTE+ +++N + L + + G+R+A+DDFGTGYSS++ ++ FP Sbjct: 622 LIDSGLAPDRLEIEVTETALIQNEAESFEDLRQLYDMGVRVALDDFGTGYSSLAHLRAFP 681 Query: 1260 IDTIKIDRSFVRDLPNDSEDVAIAQAIISMGKALGMTIVAEGVETSEQQEFLRAHACDEM 1319 D IKIDRSFVRDL + + +AI +G+ LG+T VAEGVET +R C E Sbjct: 682 FDKIKIDRSFVRDLLERPDSAVLVRAIADLGRQLGVTTVAEGVETQAHVRGIREAGCTEA 741 Query: 1320 QGFLFSRPLPP---RDLAELLKPSQAEAS 1345 QG+ + RP P R E P++ +A+ Sbjct: 742 QGYYYGRPAPSDEDRPRVEACGPARTDAA 770 >PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 267 Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 128/262 (48%), Positives = 185/262 (70%), Gaps = 1/262 (0%) Query: 1086 ERLTMESALRRALERNQFSLDYQPKVDMASGAISGVEALLRWTHPELGKVSPGQFIPLAE 1145 ER+ +E+ LRRALER++ L YQPK+ + SG + G EAL+RW HP G++SP +FIPLAE Sbjct: 1 ERMALETELRRALERDELQLYYQPKLSLESGLLVGAEALVRWYHPLFGEISPERFIPLAE 60 Query: 1146 EIGLIVPIGRWVLKEACAQNMAWQRRGLRAVTMAVNLSPRQFGDPNLLDDIDAALEKSGM 1205 + GLI+P+G WVL+ AC Q WQ+ ++VNL+ Q G P L++ ++ LE+SG+ Sbjct: 61 DCGLILPLGDWVLEHACQQMGEWQKLHAPFGPLSVNLAGAQLGQPQLIERLEQLLEQSGL 120 Query: 1206 SPALLQLEVTESMVMRNVTRAVRVLDAIQNRGIRLAIDDFGTGYSSMSLMKQFPIDTIKI 1265 P+ LQLE+TES +M A+ VL ++ G++LAIDDFGTGYSS+S +K+ P+D +KI Sbjct: 121 EPSRLQLEITESFIMNQTEEALAVLHGLKRLGVQLAIDDFGTGYSSLSYLKRLPLDILKI 180 Query: 1266 DRSFVRDLPNDSEDVAIAQAIISMGKALGMTIVAEGVETSEQQEFLRAHACDEMQGFLFS 1325 D+SF+R LP+D D AI +AII++G+++ +T++AEGVET QQ FL C+++QGF+ S Sbjct: 181 DKSFIRGLPDDPHDAAITRAIIALGRSMQLTVIAEGVETEGQQSFLTHEGCEQIQGFVLS 240 Query: 1326 RPLPPRDLA-ELLKPSQAEASP 1346 PLP A + LKP Q +P Sbjct: 241 PPLPAELFASKFLKPRQPIGAP 262 >all1175_4 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 261 Score = 273 bits (697), Expect = 3e-72, Method: Composition-based stats. Identities = 124/260 (47%), Positives = 184/260 (70%) Query: 1086 ERLTMESALRRALERNQFSLDYQPKVDMASGAISGVEALLRWTHPELGKVSPGQFIPLAE 1145 E LT+E +LR ALE+ + + YQP+V++ +G I+G+EALLRW HPE+G V+P FIP+AE Sbjct: 1 ELLTLEKSLRYALEKQELKVYYQPRVNILTGQITGMEALLRWQHPEMGIVAPSIFIPIAE 60 Query: 1146 EIGLIVPIGRWVLKEACAQNMAWQRRGLRAVTMAVNLSPRQFGDPNLLDDIDAALEKSGM 1205 E GLI+PIG WVL+ AC QN AWQ GL V MAVNLSP+QF P LL+ + A L ++G+ Sbjct: 61 ETGLIIPIGEWVLRTACMQNRAWQEAGLPPVQMAVNLSPKQFRQPTLLELVSAILAETGL 120 Query: 1206 SPALLQLEVTESMVMRNVTRAVRVLDAIQNRGIRLAIDDFGTGYSSMSLMKQFPIDTIKI 1265 +P L+LE+TES + ++ VL+ +Q G+ +AIDDFGTG+SS+S ++ P+ +KI Sbjct: 121 APEFLELEITESTAIEDIDFTRSVLENLQQMGVDIAIDDFGTGHSSLSRLQLLPLHNLKI 180 Query: 1266 DRSFVRDLPNDSEDVAIAQAIISMGKALGMTIVAEGVETSEQQEFLRAHACDEMQGFLFS 1325 D SF++ L DS+ I +AI+++G++LG+ + AEGVE E+ +FL++ C ++QGFLF Sbjct: 181 DGSFIKALTTDSKVAHIVKAIVTLGRSLGLRLTAEGVEKQEELDFLKSINCQDVQGFLFH 240 Query: 1326 RPLPPRDLAELLKPSQAEAS 1345 +PL E+L+ + A+ Sbjct: 241 KPLSAEKATEILQGEKKHAT 260 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 268 bits (685), Expect = 6e-71, Method: Composition-based stats. Identities = 122/259 (47%), Positives = 183/259 (70%) Query: 1086 ERLTMESALRRALERNQFSLDYQPKVDMASGAISGVEALLRWTHPELGKVSPGQFIPLAE 1145 ERL +E+ L ALERN+ + YQP +D+ + I+ VEAL+RW HP G VSP +FIP+AE Sbjct: 1 ERLALENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAE 60 Query: 1146 EIGLIVPIGRWVLKEACAQNMAWQRRGLRAVTMAVNLSPRQFGDPNLLDDIDAALEKSGM 1205 GLIV IG WVL+ AC QN WQ GL + M+VNLS RQF + NL++ + +++SG+ Sbjct: 61 ANGLIVEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGL 120 Query: 1206 SPALLQLEVTESMVMRNVTRAVRVLDAIQNRGIRLAIDDFGTGYSSMSLMKQFPIDTIKI 1265 P+ L+LEVTES +M ++ R+V +L ++ G+ LA+DDFGTGYSS++ +K+FP++ +KI Sbjct: 121 HPSYLELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKI 180 Query: 1266 DRSFVRDLPNDSEDVAIAQAIISMGKALGMTIVAEGVETSEQQEFLRAHACDEMQGFLFS 1325 DRSFV+D+ ++ + A+ AII++ K+L + I AEG+ET +Q +L+ C E QG+ F Sbjct: 181 DRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFG 240 Query: 1326 RPLPPRDLAELLKPSQAEA 1344 P P +++ E+L+P +A A Sbjct: 241 IPAPAKEIMEILQPKEAIA 259 >SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 257 Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 127/252 (50%), Positives = 176/252 (69%) Query: 1086 ERLTMESALRRALERNQFSLDYQPKVDMASGAISGVEALLRWTHPELGKVSPGQFIPLAE 1145 E+L + LR AL R +F L +QP++ + +G I EALLRW HP G +SP FIPLAE Sbjct: 1 EKLQSQEELREALAREEFLLHFQPQMSLETGRIFAAEALLRWQHPVRGIISPAAFIPLAE 60 Query: 1146 EIGLIVPIGRWVLKEACAQNMAWQRRGLRAVTMAVNLSPRQFGDPNLLDDIDAALEKSGM 1205 E GLIVPIG WVL+ AC Q AWQ GL + ++VN+S RQF + N + A LE++ + Sbjct: 61 ETGLIVPIGDWVLRTACRQLKAWQDAGLPPLIVSVNVSARQFRERNWAARVAAVLEETCL 120 Query: 1206 SPALLQLEVTESMVMRNVTRAVRVLDAIQNRGIRLAIDDFGTGYSSMSLMKQFPIDTIKI 1265 L+LE+TES++M++V A+ + A++ G+ LAIDDFGTGYSS+S +K+FP+ +KI Sbjct: 121 EARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKI 180 Query: 1266 DRSFVRDLPNDSEDVAIAQAIISMGKALGMTIVAEGVETSEQQEFLRAHACDEMQGFLFS 1325 DRSFV D+P+D++D+AI AIIS+ + LG+ ++AEGVET Q EFL+ C E+QG+ FS Sbjct: 181 DRSFVTDIPHDADDMAITSAIISLAQKLGLRVIAEGVETEAQVEFLQKSGCGEIQGYFFS 240 Query: 1326 RPLPPRDLAELL 1337 +PLP D LL Sbjct: 241 QPLPGEDFEVLL 252