BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0175.p (199 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC0791 [R] COG0655 Multimeric flavodoxin WrbA Ccr Caulobacter vi... 335 3e-92 SMa0340 [R] COG0655 Multimeric flavodoxin WrbA Sme Sinorhizobium... 295 3e-80 SMc00943 [R] COG0655 Multimeric flavodoxin WrbA Sme Sinorhizobiu... 285 3e-77 AGc3175 [R] COG0655 Multimeric flavodoxin WrbA Atu Agrobacterium... 275 4e-74 SMa1935 [R] COG0655 Multimeric flavodoxin WrbA Sme Sinorhizobium... 260 1e-69 >CC0791 [R] COG0655 Multimeric flavodoxin WrbA Ccr Caulobacter vibrioides Length = 199 Score = 335 bits (860), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 160/199 (80%), Positives = 178/199 (89%) Query: 1 MAKVLVLYYSAYGHIEAMANAVAEGAREAGVTVDIKRVPELVPAEVAKASHYKLDQAAPV 60 MAKVLVLYYS+YGH+E MA A+AEGAREAG +VDIKRVPE VP E+AK +H+KLDQ APV Sbjct: 1 MAKVLVLYYSSYGHLEVMAKAIAEGAREAGASVDIKRVPETVPLEIAKGAHFKLDQDAPV 60 Query: 61 AKIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSSATQHGG 120 AK++DLA+YDAIIVG TRFGRMASQMA F D AGGLWA+GAL+GKV GAFTS+ATQHGG Sbjct: 61 AKVEDLADYDAIIVGAPTRFGRMASQMAAFFDAAGGLWARGALHGKVAGAFTSTATQHGG 120 Query: 121 QETTLFSIITNLLHFGMTVVGLNYGFAGQMRLDEVTGGAPYGATTITGGDGSRQPSENEL 180 QETTLFSIITN+LHFG T+VGL+YG AGQM LDE+TGG+PYGATTI GGDGSRQPSENEL Sbjct: 121 QETTLFSIITNMLHFGTTIVGLDYGHAGQMTLDEITGGSPYGATTIAGGDGSRQPSENEL 180 Query: 181 AGARYQGRAIAETAKKLRG 199 GARYQGR IAETA KL G Sbjct: 181 TGARYQGRKIAETAIKLHG 199 >SMa0340 [R] COG0655 Multimeric flavodoxin WrbA Sme Sinorhizobium meliloti Length = 202 Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 141/188 (75%), Positives = 160/188 (85%) Query: 1 MAKVLVLYYSAYGHIEAMANAVAEGAREAGVTVDIKRVPELVPAEVAKASHYKLDQAAPV 60 M +VLVLYYS+YGHIE MA AVAEGAR G V IKRVPE VP EVA +H+KL+QAAPV Sbjct: 1 MTRVLVLYYSSYGHIETMAGAVAEGARSTGAEVTIKRVPETVPIEVADKAHFKLNQAAPV 60 Query: 61 AKIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSSATQHGG 120 A + +LA+YDAIIVGTGTRFGRM+SQMA FLDQAGGLWA+GALNGKVGGAF S+ TQHGG Sbjct: 61 ATVAELADYDAIIVGTGTRFGRMSSQMAVFLDQAGGLWARGALNGKVGGAFVSTGTQHGG 120 Query: 121 QETTLFSIITNLLHFGMTVVGLNYGFAGQMRLDEVTGGAPYGATTITGGDGSRQPSENEL 180 QETTLFSIITNL+HFGM +VGL Y GQM +DE+ GGAPYGATT+ GGDGSRQPS+ +L Sbjct: 121 QETTLFSIITNLMHFGMVIVGLPYSHQGQMSVDEIVGGAPYGATTVAGGDGSRQPSQIDL 180 Query: 181 AGARYQGR 188 AGA +QG Sbjct: 181 AGAFHQGE 188 >SMc00943 [R] COG0655 Multimeric flavodoxin WrbA Sme Sinorhizobium meliloti Length = 199 Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 137/197 (69%), Positives = 161/197 (81%) Query: 1 MAKVLVLYYSAYGHIEAMANAVAEGAREAGVTVDIKRVPELVPAEVAKASHYKLDQAAPV 60 MA+VLVLYYSAYGHIE MA+AVAEGAR AG V +KRVPELVP +VAKASH+KLDQ APV Sbjct: 1 MARVLVLYYSAYGHIETMAHAVAEGARSAGAEVAVKRVPELVPEDVAKASHFKLDQPAPV 60 Query: 61 AKIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSSATQHGG 120 A +++LA+YDAII G GTR+G +ASQ+ NF+DQ GGLWAKG L GKVG AFTSSATQHGG Sbjct: 61 ATVEELADYDAIIFGAGTRYGTVASQLRNFIDQTGGLWAKGKLVGKVGSAFTSSATQHGG 120 Query: 121 QETTLFSIITNLLHFGMTVVGLNYGFAGQMRLDEVTGGAPYGATTITGGDGSRQPSENEL 180 QE+T+ +I ++H GM VVGL Y F GQM ++EV GG+PYGA+TITGGDGSRQPS EL Sbjct: 121 QESTILGLIPTMMHHGMVVVGLPYAFQGQMGVEEVKGGSPYGASTITGGDGSRQPSAVEL 180 Query: 181 AGARYQGRAIAETAKKL 197 AR+QG +A A KL Sbjct: 181 EAARFQGAHVARIAAKL 197 >AGc3175 [R] COG0655 Multimeric flavodoxin WrbA Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 223 Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 134/197 (68%), Positives = 150/197 (76%) Query: 1 MAKVLVLYYSAYGHIEAMANAVAEGAREAGVTVDIKRVPELVPAEVAKASHYKLDQAAPV 60 M KVLVLYYS+YGHIE MA AVAEG G +KRVPELVP EVAK+SH+K+DQ APV Sbjct: 25 MTKVLVLYYSSYGHIETMAYAVAEGVESTGAEAVVKRVPELVPEEVAKSSHFKMDQPAPV 84 Query: 61 AKIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSSATQHGG 120 A +D+LA YDAIIVG GTRFG +ASQM NF DQ GGLW G L GKVG AFTSSATQHGG Sbjct: 85 ATVDELAEYDAIIVGAGTRFGTVASQMRNFWDQTGGLWFSGKLVGKVGSAFTSSATQHGG 144 Query: 121 QETTLFSIITNLLHFGMTVVGLNYGFAGQMRLDEVTGGAPYGATTITGGDGSRQPSENEL 180 QE+T+ I LH GM VVGL Y F GQM +DE+ GG+PYGA+TIT GDGSRQPS EL Sbjct: 145 QESTILGFIPTFLHHGMAVVGLPYAFQGQMGVDEIKGGSPYGASTITDGDGSRQPSAIEL 204 Query: 181 AGARYQGRAIAETAKKL 197 ARYQG +A+ A KL Sbjct: 205 DAARYQGAHVAKLAAKL 221 >SMa1935 [R] COG0655 Multimeric flavodoxin WrbA Sme Sinorhizobium meliloti Length = 212 Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 123/200 (61%), Positives = 154/200 (77%), Gaps = 2/200 (1%) Query: 1 MAKVLVLYYSAYGHIEAMANAVAEGAREAGVTVDIKRVPELVPAEVAKASHYKLDQAAPV 60 M K+LVLYYS+YGHIEAMA AVA GA++AG TV +KRVPELVP VA++S Y+L Q AP+ Sbjct: 1 MTKMLVLYYSSYGHIEAMAKAVANGAKQAGATVALKRVPELVPEAVARSSGYRLGQEAPI 60 Query: 61 AKIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSSATQHGG 120 A + +LA+YDAI++GT TRFG MASQM NFLDQ GGLWA+ L GKVG FTS+ +QHGG Sbjct: 61 ATVAELADYDAIVIGTPTRFGNMASQMKNFLDQTGGLWAENKLVGKVGSVFTSTGSQHGG 120 Query: 121 QETTLFSIITNLLHFGMTVVGLNYGFAGQMRLDEVTGGAPYGATTITGGDG--SRQPSEN 178 QE+T+ S +LH GM +VGL Y F GQMR+DE+TGG+PYGA+T+ + R PS N Sbjct: 121 QESTILSTHVVMLHLGMVIVGLPYSFKGQMRMDEITGGSPYGASTLAEDENHRDRSPSAN 180 Query: 179 ELAGARYQGRAIAETAKKLR 198 EL GAR+QGR +AE A ++ Sbjct: 181 ELDGARFQGRHVAEVAAAMQ 200