BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0117.p         (132 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll5429 [J] COG0251 Putative translation initiation inhibitor, y...   110   7e-25
RSp0039 [J] COG0251 Putative translation initiation inhibitor, y...   107   9e-24

>mll5429 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Mlo Mesorhizobium loti
          Length = 137

 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 3/131 (2%)

Query: 3   VLQPAEWSKPRGFSHGVAFDAPGRWIVLAGQTGGDEKGDYQPE-MAAQVGTALKRIVKLL 61
           +LQP  W+KP G+++GVA  A GR I + GQ G + +  ++ +    QV   L+ IV +L
Sbjct: 4   ILQPEGWAKPVGYANGVA--ARGRLIFVGGQVGWNGQCQFETDDFVGQVRQTLQNIVAVL 61

Query: 62  NEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIDGLVDQRAKV 121
            EAGA P HI  +TWY T ++EY A   GIG A++E +GR+FP    + +  LV+ RAKV
Sbjct: 62  AEAGAEPRHITSMTWYFTDKAEYLANLRGIGEAYREVIGRHFPAMAAMQVMALVEDRAKV 121

Query: 122 EIEVTAFVPAA 132
           EI+ TA +P A
Sbjct: 122 EIQATAVIPDA 132


>RSp0039 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Rso Ralstonia solanacearum
          Length = 130

 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 84/131 (64%), Gaps = 3/131 (2%)

Query: 1   MRVLQPAEWSKPRGFSHGVAFDAPGRWIVLAGQTGGDEKGDYQPE-MAAQVGTALKRIVK 59
           M+VL P  W +P+G+++GV+  A GR I +AG  G D +G +  + +A QV  AL+ IV+
Sbjct: 1   MQVLLPPGWPRPKGYANGVS--ARGRMIFVAGMIGWDAQGVFHTDDLAGQVRQALQNIVE 58

Query: 60  LLNEAGAGPEHIVRLTWYLTSRSEYEAAGAGIGAAWKETLGRNFPPSTLLYIDGLVDQRA 119
           +L E GA P HIVR+TWY+T +  Y AA   IG  ++E +G      T + +  LV+ RA
Sbjct: 59  VLAEGGAEPGHIVRMTWYVTDKQAYIAAYTEIGQVFRELIGSFSIAMTAVEVSALVEDRA 118

Query: 120 KVEIEVTAFVP 130
           KVEIEVTA VP
Sbjct: 119 KVEIEVTAVVP 129