BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0059.0072.p (271 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc04411 [M] COG2951 Membrane-bound lytic murein transglycosylas... 224 1e-58 AGc4522 [M] COG2951 Membrane-bound lytic murein transglycosylase... 204 1e-52 BMEI0223 [M] COG2951 Membrane-bound lytic murein transglycosylas... 204 2e-52 mlr1581 [M] COG2951 Membrane-bound lytic murein transglycosylase... 200 3e-51 SMc01845 [M] COG2951 Membrane-bound lytic murein transglycosylas... 191 1e-48 >SMc04411 [M] COG2951 Membrane-bound lytic murein transglycosylase B Sme Sinorhizobium meliloti Length = 273 Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/270 (44%), Positives = 166/270 (61%), Gaps = 14/270 (5%) Query: 8 RTLAIGAWLLTST----ASALAAQCGT--GTFESWLDDFKKEAATKGISQNAIQAGLTGV 61 ++ A G L ST A+A AAQCG F +WL +FK+EAA GIS + + L V Sbjct: 5 KSAAAGLAALISTVVLPAAASAAQCGNDGSGFSAWLSEFKREAAGNGISPSVVDQALANV 64 Query: 62 TQDKAILARDHSQQVFSQTFEQF----SGRMVPPRLNRGSDMMKRYGSVLSRIEEAYGVP 117 + +A + D Q+ F + +QF G+M+ ++RG + + + IE+ YGVP Sbjct: 65 SYSRATIRADRGQKSFKLSLDQFMQKRGGQMI---ISRGKKLRAQNARLFQSIEQRYGVP 121 Query: 118 GEILVAIWGLETDFGVNTGKFPTIRSLATLAYDCRRSDMFKAELMDALRIVERGDLPPQE 177 L+AIWG+ET FG GK T+ +++TLAYDCRRSD F +L AL++VERGDL P Sbjct: 122 AGPLIAIWGMETGFGSFLGKEHTLSAVSTLAYDCRRSDYFTNQLYAALQLVERGDLSP-A 180 Query: 178 MRGAWAGEIGQTQFLPSSYIKFAVDFDGNGKRDLLHNVPDVLASTANYLKSYGWKKGKGW 237 RGA GEIGQTQFLP + +K+ VD DGNG D++ + D LASTAN+L+ +GW+ G G+ Sbjct: 181 ARGAAHGEIGQTQFLPVNVLKYGVDGDGNGHVDMVRSKADALASTANFLRGHGWQPGGGY 240 Query: 238 EPGSENFAVIQQWNKSEVYAKTIGYFATQL 267 +PG NFA IQ WN + VY + I ++ Sbjct: 241 QPGEVNFAAIQGWNAASVYQQAIAIIGAEI 270 >AGc4522 [M] COG2951 Membrane-bound lytic murein transglycosylase B Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 272 Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 153/242 (63%), Gaps = 4/242 (1%) Query: 24 LAAQCG--TGTFESWLDDFKKEAATKGISQNAIQAGLTGVTQDKAILARDHSQQVFSQTF 81 +AAQCG + F++W+ FK+EAA +G+S + + +GV+ ++A + D Q F +F Sbjct: 24 MAAQCGNTSAGFDAWVSAFKQEAAGRGVSASVLDRAFSGVSYNQATIRADRGQHSFKLSF 83 Query: 82 EQF-SGRMVPPRLNRGSDMMKRYGSVLSRIEEAYGVPGEILVAIWGLETDFGVNTGKFPT 140 EQF R ++RG M K ++ + IE YGVP L+AIWG+ET FG G T Sbjct: 84 EQFMQKRGGQTIISRGKTMKKNNAALFASIERTYGVPAGPLLAIWGMETGFGGFMGNQHT 143 Query: 141 IRSLATLAYDCRRSDMFKAELMDALRIVERGDLPPQEMRGAWAGEIGQTQFLPSSYIKFA 200 + ++ATL++DCRRSD F +L AL++V G L +GA GEIGQTQFLP + +++ Sbjct: 144 LSAVATLSFDCRRSDYFTEQLYAALKLVGSGSLNVNA-KGAAHGEIGQTQFLPLNVVRYG 202 Query: 201 VDFDGNGKRDLLHNVPDVLASTANYLKSYGWKKGKGWEPGSENFAVIQQWNKSEVYAKTI 260 VDFD +G+ DL+ + D LASTAN+L +GW++G G++ G +FA IQ WN + VY + I Sbjct: 203 VDFDRDGRIDLVGSRADALASTANFLVGHGWQRGAGYQQGQPSFAAIQGWNAASVYQQAI 262 Query: 261 GY 262 + Sbjct: 263 AF 264 >BMEI0223 [M] COG2951 Membrane-bound lytic murein transglycosylase B Bme Brucella melitensis Length = 255 Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 106/241 (43%), Positives = 150/241 (62%), Gaps = 5/241 (2%) Query: 23 ALAAQCGTGT--FESWLDDFKKEAATKGISQNAIQAGLTGVTQDKAILARDHSQQVFSQT 80 A AAQCG + +WL KEAA++GI + I A L +A + D +Q+ F + Sbjct: 7 AEAAQCGNNAAGYNAWLQQTMKEAASRGIGKAGINA-LANTKYAQATINADRNQKSFKLS 65 Query: 81 FEQF-SGRMVPPRLNRGSDMMKRYGSVLSRIEEAYGVPGEILVAIWGLETDFGVNTGKFP 139 FEQF R + RG M ++ ++ + IE+ YGVP L+AIWG+ET FG GK Sbjct: 66 FEQFMQKRGADTIIKRGRAMKQQNAALFANIEKRYGVPAGPLIAIWGMETGFGSYMGKQH 125 Query: 140 TIRSLATLAYDCRRSDMFKAELMDALRIVERGDLPPQEMRGAWAGEIGQTQFLPSSYIKF 199 T+ ++ATLAYDCRRSD F +L AL++++R DL P + GA GEIGQTQFLP + + + Sbjct: 126 TLSAVATLAYDCRRSDYFTDQLYAALKLIDREDLSPAAI-GAMHGEIGQTQFLPVNVLNY 184 Query: 200 AVDFDGNGKRDLLHNVPDVLASTANYLKSYGWKKGKGWEPGSENFAVIQQWNKSEVYAKT 259 VD DG+G D+ + D L STAN+L +GW++G G++PG N+A IQ WN ++VY + Sbjct: 185 GVDGDGSGHIDMARSKADALYSTANFLVGHGWQRGAGYQPGEPNYAAIQGWNAAQVYQRA 244 Query: 260 I 260 I Sbjct: 245 I 245 >mlr1581 [M] COG2951 Membrane-bound lytic murein transglycosylase B Mlo Mesorhizobium loti Length = 392 Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 105/233 (45%), Positives = 150/233 (64%), Gaps = 5/233 (2%) Query: 7 FRTLAIGAWLLTSTA-SALAAQCGTGTFESWLDDFKKEAATKGISQNAIQAGLTGVTQDK 65 R+ A+ A L +TA A+A +CG G FE+W EA G+ + A L T D+ Sbjct: 3 LRSQALAALFLCATALPAMAQECG-GDFETWKQGVAAEAKAAGVGAVGLDA-LEDATIDE 60 Query: 66 AILARDHSQQVFSQTFEQFSGRMVPP-RLNRGSDMMKRYGSVLSRIEEAYGVPGEILVAI 124 LARD +Q VF+QTF +FS RM+ RL +G+ MK+Y V +R ++ +GV ++ A Sbjct: 61 RALARDRAQGVFTQTFIEFSNRMISAYRLKQGAANMKKYADVFARADQQFGVQAPVITAF 120 Query: 125 WGLETDFGVNTGKFPTIRSLATLAYDCRRSDMFKAELMDALRIVERGDLPPQEMRGAWAG 184 W LETDFG G F T+ +L TL++DCRR +F+ +L+ L +++RG L P +++GAWAG Sbjct: 121 WALETDFGAVQGDFHTLSALVTLSHDCRRPQLFRQQLVPLLELIDRGVL-PADVKGAWAG 179 Query: 185 EIGQTQFLPSSYIKFAVDFDGNGKRDLLHNVPDVLASTANYLKSYGWKKGKGW 237 EIGQTQ LPS Y+ VD DG+GK DL ++VPDV+ +TAN + S GWK+ + W Sbjct: 180 EIGQTQILPSDYLARGVDGDGDGKIDLRNSVPDVIMTTANKVLSRGWKRDEPW 232 >SMc01845 [M] COG2951 Membrane-bound lytic murein transglycosylase B Sme Sinorhizobium meliloti Length = 405 Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 2/214 (0%) Query: 25 AAQCGTGTFESWLDDFKKEAATKGISQNAIQAGLTGVTQDKAILARDHSQQVFSQTFEQF 84 AA CG G S+L+ K EA KGI + L G D+ +L+RD +Q VF QTF +F Sbjct: 34 AAACG-GDLGSFLEGVKAEAVAKGIPADVADRALAGAAIDQKVLSRDRAQGVFKQTFTEF 92 Query: 85 SGRMVP-PRLNRGSDMMKRYGSVLSRIEEAYGVPGEILVAIWGLETDFGVNTGKFPTIRS 143 S R V RL+ G+ M+ Y V +R E+ +GVP ++ A W +ETDFG G F T + Sbjct: 93 SKRTVSKSRLDIGAQKMREYADVFARAEQEFGVPAPVITAFWAMETDFGAVQGDFNTRDA 152 Query: 144 LATLAYDCRRSDMFKAELMDALRIVERGDLPPQEMRGAWAGEIGQTQFLPSSYIKFAVDF 203 L TLA+DCRR +MF+ +L+ A+ +V+ GDL P GAWAGEIGQ Q LP I + VD Sbjct: 153 LVTLAHDCRRPEMFRPQLLAAIEMVQHGDLDPAATTGAWAGEIGQVQMLPEDIIAYGVDG 212 Query: 204 DGNGKRDLLHNVPDVLASTANYLKSYGWKKGKGW 237 DG+G +L + PD + + A +++S G+K G+ W Sbjct: 213 DGDGHVNLKKSSPDAILTAAKFIQSLGFKPGEPW 246