BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0059.0020.p         (119 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc03313 [L] COG3415 Transposase and inactivated derivatives Sme...    59   3e-09
SMc03088 [L] COG3415 Transposase and inactivated derivatives Sme...    59   3e-09
SMc02398 [L] COG3415 Transposase and inactivated derivatives Sme...    59   3e-09
SMc02291 [L] COG3415 Transposase and inactivated derivatives Sme...    59   3e-09
SMc01339 [L] COG3415 Transposase and inactivated derivatives Sme...    59   3e-09

>SMc03313 [L] COG3415 Transposase and inactivated derivatives Sme
           Sinorhizobium meliloti
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 1   VVAAIDG-GLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLI 59
           VV A+ G GLSCR AA+RFG+  ++AI W  R +E G   P + GG +  +    H   +
Sbjct: 13  VVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRFRETGSAAPGQMGGHKPRKLSGPHRAWL 72

Query: 60  LDAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
           L     + D TL  L   L  RG+     ++W F + E    KK
Sbjct: 73  LCRCRER-DFTLHGLVAELSERGLKVDYRAVWTFVHEEGLSYKK 115


>SMc03088 [L] COG3415 Transposase and inactivated derivatives Sme
           Sinorhizobium meliloti
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 1   VVAAIDG-GLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLI 59
           VV A+ G GLSCR AA+RFG+  ++AI W  R +E G   P + GG +  +    H   +
Sbjct: 13  VVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRFRETGSAAPGQMGGHKPRKLSGPHRAWL 72

Query: 60  LDAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
           L     + D TL  L   L  RG+     ++W F + E    KK
Sbjct: 73  LCRCRER-DFTLHGLVAELSERGLKVDYRAVWTFVHEEGLSYKK 115


>SMc02398 [L] COG3415 Transposase and inactivated derivatives Sme
           Sinorhizobium meliloti
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 1   VVAAIDG-GLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLI 59
           VV A+ G GLSCR AA+RFG+  ++AI W  R +E G   P + GG +  +    H   +
Sbjct: 13  VVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRFRETGSAAPGQMGGHKPRKLSGPHRAWL 72

Query: 60  LDAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
           L     + D TL  L   L  RG+     ++W F + E    KK
Sbjct: 73  LCRCRER-DFTLHGLVAELSERGLKVDYRAVWTFVHEEGLSYKK 115


>SMc02291 [L] COG3415 Transposase and inactivated derivatives Sme
           Sinorhizobium meliloti
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 1   VVAAIDG-GLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLI 59
           VV A+ G GLSCR AA+RFG+  ++AI W  R +E G   P + GG +  +    H   +
Sbjct: 13  VVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRFRETGSAAPGQMGGHKPRKLSGPHRAWL 72

Query: 60  LDAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
           L     + D TL  L   L  RG+     ++W F + E    KK
Sbjct: 73  LCRCRER-DFTLHGLVAELSERGLKVDYRAVWTFVHEEGLSYKK 115


>SMc01339 [L] COG3415 Transposase and inactivated derivatives Sme
           Sinorhizobium meliloti
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 1   VVAAIDG-GLSCRRAAERFGVSAASAIRWRSRLKEVGDIVPKRQGGDRKSQRIEAHSQLI 59
           VV A+ G GLSCR AA+RFG+  ++AI W  R +E G   P + GG +  +    H   +
Sbjct: 13  VVDAVTGEGLSCRAAAKRFGIGISTAIDWVRRFRETGSAAPGQMGGHKPRKLSGPHRAWL 72

Query: 60  LDAVTAKPDITLAELQELLKRRGISAGIASLWRFFNAERSHLKK 103
           L     + D TL  L   L  RG+     ++W F + E    KK
Sbjct: 73  LCRCRER-DFTLHGLVAELSERGLKVDYRAVWTFVHEEGLSYKK 115