BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0057.0015.p         (66 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv3274c [I] COG1960 Acyl-CoA dehydrogenases Mtu Mycobacterium tu...   105   3e-23
MT3374 [I] COG1960 Acyl-CoA dehydrogenases MtC Mycobacterium tub...   105   3e-23
ML0737 [I] COG1960 Acyl-CoA dehydrogenases Mle Mycobacterium leprae   105   3e-23
Ta0974 [I] COG1960 Acyl-CoA dehydrogenases Tac Thermoplasma acid...    99   3e-21
TVN1120 [I] COG1960 Acyl-CoA dehydrogenases Tvo Thermoplasma vol...    97   6e-21

>Rv3274c [I] COG1960 Acyl-CoA dehydrogenases Mtu Mycobacterium tuberculosis
           H37Rv
          Length = 389

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 58/65 (89%)

Query: 2   LASMAKCVGSDMAMKVTTDAVQIFGGYGYTMDYPVERMMRDAKLTQIFEGTNQIQRVVIA 61
           +++ +KC  SD+AM+VTTDAVQ+FGG GYT D+PVER MRDAK+TQI+EGTNQIQRVV++
Sbjct: 325 ISAASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMS 384

Query: 62  RELLR 66
           R LLR
Sbjct: 385 RALLR 389


>MT3374 [I] COG1960 Acyl-CoA dehydrogenases MtC Mycobacterium tuberculosis
           CDC1551
          Length = 389

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 58/65 (89%)

Query: 2   LASMAKCVGSDMAMKVTTDAVQIFGGYGYTMDYPVERMMRDAKLTQIFEGTNQIQRVVIA 61
           +++ +KC  SD+AM+VTTDAVQ+FGG GYT D+PVER MRDAK+TQI+EGTNQIQRVV++
Sbjct: 325 ISAASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMS 384

Query: 62  RELLR 66
           R LLR
Sbjct: 385 RALLR 389


>ML0737 [I] COG1960 Acyl-CoA dehydrogenases Mle Mycobacterium leprae
          Length = 389

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 58/65 (89%)

Query: 2   LASMAKCVGSDMAMKVTTDAVQIFGGYGYTMDYPVERMMRDAKLTQIFEGTNQIQRVVIA 61
           +++ +KC  SD+AM+VTTDAVQ+FGG GYT D+PVER MRDAK+TQI+EGTNQIQRVV++
Sbjct: 325 ISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMS 384

Query: 62  RELLR 66
           R LLR
Sbjct: 385 RALLR 389


>Ta0974 [I] COG1960 Acyl-CoA dehydrogenases Tac Thermoplasma acidophilum
          Length = 384

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 57/65 (87%)

Query: 2   LASMAKCVGSDMAMKVTTDAVQIFGGYGYTMDYPVERMMRDAKLTQIFEGTNQIQRVVIA 61
           +++MAK   SD+AM+VTTDA+Q+FGGYGYT D   ER MRDAK+TQI+EGTNQIQR+VIA
Sbjct: 315 ISAMAKMKASDVAMRVTTDALQLFGGYGYTTDLDAERHMRDAKITQIYEGTNQIQRLVIA 374

Query: 62  RELLR 66
           +E+L+
Sbjct: 375 KEILK 379


>TVN1120 [I] COG1960 Acyl-CoA dehydrogenases Tvo Thermoplasma volcanium
          Length = 384

 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 58/65 (89%)

Query: 2   LASMAKCVGSDMAMKVTTDAVQIFGGYGYTMDYPVERMMRDAKLTQIFEGTNQIQRVVIA 61
           +++MAK   SD+A++VTTDA+Q+FGGYGYT+D   ER MRD+K+TQI+EGTNQIQR+VIA
Sbjct: 315 ISAMAKLKASDVAVRVTTDALQLFGGYGYTVDLDAERHMRDSKITQIYEGTNQIQRLVIA 374

Query: 62  RELLR 66
           +ELL+
Sbjct: 375 KELLK 379