BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0056.0005.p         (158 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr6190 [L] COG3547 Transposase and inactivated derivatives Mlo ...   269   1e-72
mll6066 [L] COG3547 Transposase and inactivated derivatives Mlo ...   127   9e-30
mlr6032 [L] COG3547 Transposase and inactivated derivatives Mlo ...    86   5e-17
mlr6069 [L] COG3547 Transposase and inactivated derivatives Mlo ...    83   3e-16
mll5981 [L] COG3547 Transposase and inactivated derivatives Mlo ...    83   3e-16

>mlr6190 [L] COG3547 Transposase and inactivated derivatives Mlo
           Mesorhizobium loti
          Length = 381

 Score =  269 bits (688), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 126/158 (79%), Positives = 143/158 (90%)

Query: 1   MDESAICVVDDKGAVALQTTVVTDPDAIKTALKPYLARLRRLGHEAGSLSPWLHPELLKL 60
           MDE+A+CVVDD+GAV L+  V+TDP+A+   LKP+LARLRR+GHEAGSLSPWLHPEL KL
Sbjct: 30  MDETAVCVVDDQGAVHLEAAVMTDPEALFAVLKPFLARLRRVGHEAGSLSPWLHPELKKL 89

Query: 61  GLPAVCLETLHVRAALNAQRNKTDKTDALGIAHIMRTGWFRKAHIKSEACYRLRLLLTHR 120
           GLPA+CLET HVRAAL+AQRNKTDK DALGIAHIMRTGWFR+A IKSE+CYR +LLLTHR
Sbjct: 90  GLPAICLETQHVRAALSAQRNKTDKADALGIAHIMRTGWFRQACIKSESCYRTKLLLTHR 149

Query: 121 RNLKRKFLDLENAVRHSLKAFGIRLNRVGRGGFAQAVR 158
           RNLK KFLDLENA+RHSLK+FGIRL +VGRG F QAVR
Sbjct: 150 RNLKAKFLDLENAIRHSLKSFGIRLGKVGRGAFEQAVR 187


>mll6066 [L] COG3547 Transposase and inactivated derivatives Mlo
           Mesorhizobium loti
          Length = 197

 Score =  127 bits (319), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 93/158 (58%)

Query: 1   MDESAICVVDDKGAVALQTTVVTDPDAIKTALKPYLARLRRLGHEAGSLSPWLHPELLKL 60
           ++E+AICVVD+ G +  +    ++P A+   L+     L R+G EA SL+ WL+  +   
Sbjct: 11  LEETAICVVDESGRIVKEGRAASEPRALYEVLRKIDLPLDRIGLEACSLAAWLYDGIRAE 70

Query: 61  GLPAVCLETLHVRAALNAQRNKTDKTDALGIAHIMRTGWFRKAHIKSEACYRLRLLLTHR 120
           GLPA+C+ET    AA+    NKTD+ DA  +A IMRTGW+R+ H+KS+ C   R LL  R
Sbjct: 71  GLPAICIETRLANAAMKTMPNKTDRNDARALAQIMRTGWYRQVHVKSQQCRLWRSLLVAR 130

Query: 121 RNLKRKFLDLENAVRHSLKAFGIRLNRVGRGGFAQAVR 158
           R +  +   +EN +R  L+  GI+L    R  FA  VR
Sbjct: 131 RTVLNEMRSIENVIRAILREAGIKLGTPSRAAFADRVR 168


>mlr6032 [L] COG3547 Transposase and inactivated derivatives Mlo
           Mesorhizobium loti
          Length = 335

 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 3/152 (1%)

Query: 1   MDESAICVVDDKGAVALQTTVVTDPDAIKTALKPYLARLRRLGHEAGSLSPWLHPELLKL 60
           M+ + +C++D+ G      T  + PDAI  AL+ +   + R   E G +SP +   L +L
Sbjct: 11  MESTQVCIIDENGRKLSSETAESTPDAIADALRRH-GPIERAVIETGRMSPAICLGLREL 69

Query: 61  GLPAVCLETLHVRAALNAQR-NKTDKTDALGIAHIMRTGWFRKAHIKSEACYRLRLLLTH 119
           G+  VC++      +L A + NKTD  DA G+A + RTG++++ H+KS   + +R ++T 
Sbjct: 70  GVNVVCIDARQAHQSLKAMKANKTDPHDAAGLAQLARTGFYKEVHVKSPGAHGVRSMITA 129

Query: 120 RRNLKRKFLDLENAVRHSLKAFGIRLNRVGRG 151
           R +L    + L+N +R     FG R   VG+G
Sbjct: 130 RGHLVEARVRLDNMIRGLCATFGCRPG-VGQG 160


>mlr6069 [L] COG3547 Transposase and inactivated derivatives Mlo
           Mesorhizobium loti
          Length = 346

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 3/159 (1%)

Query: 1   MDESAICVVDDKGAVALQTTVVTDPDAIKTALKPYLARLRRLGHEAGSLSPWLHPELLKL 60
           M E+A+ +   +G    +    +DP+ I   ++     ++R+  E G LS W +  L   
Sbjct: 11  MKETAVSI-RREGERIWRGKCASDPNIIAELVRKRAPAVKRVVFETGPLSVWFYHALRAK 69

Query: 61  GLPAVCLETLHVRAALNAQRNKTDKTDALGIAHIMRTGWFRKAHIKSEACYRLRLLLTHR 120
           GLPA+C++  H +AAL+   NKTD  DA G+A +   G+FR+  +K       R L+  R
Sbjct: 70  GLPAICIDARHAKAALDMAANKTDANDADGLARLAEAGFFREVRVKGFDSMLTRTLVAAR 129

Query: 121 RNLKRKFLDLENAVRHSLKAFGIRLNRVGRG-GFAQAVR 158
             L R  ++L N +R  +K FG+ L   G+G  F + VR
Sbjct: 130 TRLVRITVELSNQIRGIMKTFGL-LVPAGKGTTFEKNVR 167


>mll5981 [L] COG3547 Transposase and inactivated derivatives Mlo
           Mesorhizobium loti
          Length = 346

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 3/159 (1%)

Query: 1   MDESAICVVDDKGAVALQTTVVTDPDAIKTALKPYLARLRRLGHEAGSLSPWLHPELLKL 60
           M E+A+ +   +G    +    +DP+ I   ++     ++R+  E G LS W +  L   
Sbjct: 11  MKETAVSI-RREGERIWRGKCASDPNIIAELVRKRAPAVKRVVFETGPLSVWFYHALRAK 69

Query: 61  GLPAVCLETLHVRAALNAQRNKTDKTDALGIAHIMRTGWFRKAHIKSEACYRLRLLLTHR 120
           GLPA+C++  H +AAL+   NKTD  DA G+A +   G+FR+  +K       R L+  R
Sbjct: 70  GLPAICIDARHAKAALDMAANKTDANDADGLARLAEAGFFREVRVKGFDSMLTRTLVAAR 129

Query: 121 RNLKRKFLDLENAVRHSLKAFGIRLNRVGRG-GFAQAVR 158
             L R  ++L N +R  +K FG+ L   G+G  F + VR
Sbjct: 130 TRLVRITVELSNQIRGIMKTFGL-LVPAGKGTTFEKNVR 167