BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0056.0002.p         (301 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr9703 [K] COG1475 Predicted transcriptional regulators Mlo Mes...   124   2e-28

>mlr9703 [K] COG1475 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 747

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 13/196 (6%)

Query: 1   VTARLGREADSLRAAEGWRWTEAHLDFPH--AHGMRRVYAHPVELPAEDQAALQAVQTEF 58
           V  +L   AD + A EGW+W E  + FP+  A G+R +   PV+L +E++A L A++ E 
Sbjct: 310 VKDKLQMMADEI-ANEGWKWIEVAVSFPYGAADGLRELEGAPVDLSSEEKATLHALRDEL 368

Query: 59  DRLTGQHQTAEELPDDVDARFGELEAEIERLEAKRQAYDPDDVGRGGAFVILNHDGTVRV 118
             L  +++ A+ELPD+VD RFGELE+ I+ LEA+   +D  ++ R G FV ++ DG + +
Sbjct: 369 RSLQAEYEEADELPDEVDQRFGELESAIKTLEARPVRFDLAEIARAGVFVSIDTDGAILI 428

Query: 119 ERGFIRPEDEKPEAATGPESDAEAGDEG-DREGEEAAPDGEDDEGA------SDEEDGDQ 171
           ERG++RP+DE P     PE D + G +G D E            G        D+EDG +
Sbjct: 429 ERGYVRPQDEAP---VTPEGDNDPGTDGSDVEATGLVQRAVITIGGPPAGPEEDDEDGIK 485

Query: 172 KLSDALVRDLTAHRTL 187
            L D L+ +LTA RTL
Sbjct: 486 PLPDRLITELTADRTL 501