BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0054.0020.p (244 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value all0070 [P] COG0605 Superoxide dismutase Nos Nostoc sp. PCC 7120 239 4e-63 BH1409 [P] COG0605 Superoxide dismutase Bha Bacillus halodurans 234 9e-62 PA4468 [P] COG0605 Superoxide dismutase Pae Pseudomonas aeruginosa 229 6e-60 lin1478 [P] COG0605 Superoxide dismutase Lin Listeria innocua 224 1e-58 BS_sodA [P] COG0605 Superoxide dismutase Bsu Bacillus subtilis 220 2e-57 >all0070 [P] COG0605 Superoxide dismutase Nos Nostoc sp. PCC 7120 Length = 270 Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 147/229 (64%), Gaps = 1/229 (0%) Query: 11 IAAGGIAAAAATSRAAFAQATAQAPAGPFKIDPLAYPTNALEPHIDAKTMEIHHDRHHQA 70 +A+ T + + Q P ++ PL Y +ALE IDA+TM++HHD+HH A Sbjct: 38 VASPVQTTTPTTDKRSIGFIDRQLGTNPAELPPLPYGYDALEKAIDAETMKLHHDKHHAA 97 Query: 71 YVTNLNNFAKDNPQIAEKPVVEVLANLGSVPEAIRTGVRNNMGGHANHTMFWQIMGPNGG 130 YV NLNN K +P++ V +L +L SVPE IRT VRNN GGH NHT+FWQIM P+GG Sbjct: 98 YVNNLNNALKKHPELQNSSVEALLRDLNSVPEDIRTTVRNNGGGHLNHTIFWQIMSPDGG 157 Query: 131 -KADGDVLAAIDSDLGGMEKFQTDFNAAGGRVFGSGWVFVTVTKDGKLAIETRPNQDNPI 189 + GD+ I+ G E+F+ FN AGG FGSGWV++ G+L I + PNQD+PI Sbjct: 158 GQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNPQGQLQIVSTPNQDSPI 217 Query: 190 MDGKRALLGNDVWEHAYYLTYQNRRPDYLKAWWNTVNWKAVAERYAAAK 238 M+G ++GNDVWEHAYYL YQNRRP+YL WWN VNW + R A++ Sbjct: 218 MEGSYPIMGNDVWEHAYYLRYQNRRPEYLNNWWNVVNWSEINRRTQASR 266 >BH1409 [P] COG0605 Superoxide dismutase Bha Bacillus halodurans Length = 202 Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 111/201 (55%), Positives = 142/201 (70%), Gaps = 2/201 (0%) Query: 39 FKIDPLAYPTNALEPHIDAKTMEIHHDRHHQAYVTNLNNFAKDNPQIAEKPVVEVLANLG 98 F++ L YP NALEPHID TM IHH +HH YVT LN + + +AEK + ++++L Sbjct: 3 FELPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALEGHSALAEKSIEALVSDLD 62 Query: 99 SVPEAIRTGVRNNMGGHANHTMFWQIMGPNGGKA-DGDVLAAIDSDLGGMEKFQTDFNAA 157 +VPE IRT VRNN GGHANHT+FWQI+ PNGG A G++ AI+++ G ++F+ F A Sbjct: 63 AVPENIRTAVRNNGGGHANHTLFWQILSPNGGGAPTGELADAINAEFGSFDQFKEKFADA 122 Query: 158 GGRVFGSGWVFVTVTKDGKLAIETRPNQDNPIMDGKRALLGNDVWEHAYYLTYQNRRPDY 217 FGSGW ++ V DGKL I + PNQD P+M+GK +LG DVWEHAYYL YQNRRPDY Sbjct: 123 AANRFGSGWAWLVVN-DGKLEITSTPNQDTPLMEGKTPILGLDVWEHAYYLNYQNRRPDY 181 Query: 218 LKAWWNTVNWKAVAERYAAAK 238 + A+WN VNW VA+RY AK Sbjct: 182 ISAFWNVVNWDEVAKRYNEAK 202 >PA4468 [P] COG0605 Superoxide dismutase Pae Pseudomonas aeruginosa Length = 203 Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 109/203 (53%), Positives = 139/203 (68%), Gaps = 2/203 (0%) Query: 38 PFKIDPLAYPTNALEPHIDAKTMEIHHDRHHQAYVTNLNNFAKDNPQIAEKPVVEVLANL 97 P + PL Y +ALEPHIDA TMEIHH +HHQ YV NLN + P AE+PV +L L Sbjct: 2 PHALPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALEGTP-YAEQPVESLLRQL 60 Query: 98 GSVPEAIRTGVRNNMGGHANHTMFWQIMGPNGG-KADGDVLAAIDSDLGGMEKFQTDFNA 156 +PE +RT V NN GGHANH++FW +M P GG + DGD+ AID LGG E F+ F Sbjct: 61 AGLPEKLRTPVVNNGGGHANHSLFWTVMSPQGGGRPDGDLGRAIDEQLGGFEAFKDAFTK 120 Query: 157 AGGRVFGSGWVFVTVTKDGKLAIETRPNQDNPIMDGKRALLGNDVWEHAYYLTYQNRRPD 216 A FGSGW +++VT G L +E+ NQD+P+M+G +LG DVWEHAYYL YQNRRP+ Sbjct: 121 AALTRFGSGWAWLSVTPQGSLLVESSGNQDSPLMNGNTPILGLDVWEHAYYLKYQNRRPE 180 Query: 217 YLKAWWNTVNWKAVAERYAAAKA 239 Y+ A++N ++W+ VA RYA A A Sbjct: 181 YIGAFYNVIDWREVARRYAQALA 203 >lin1478 [P] COG0605 Superoxide dismutase Lin Listeria innocua Length = 202 Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/201 (52%), Positives = 142/201 (70%), Gaps = 2/201 (0%) Query: 39 FKIDPLAYPTNALEPHIDAKTMEIHHDRHHQAYVTNLNNFAKDNPQIAEKPVVEVLANLG 98 +++ L Y +ALEP+ D +TME+H+ +HH YVT LN +P++AEKPV E++ANL Sbjct: 3 YELPKLPYTYDALEPNFDKETMELHYTKHHNTYVTKLNEAVSGHPELAEKPVEELVANLD 62 Query: 99 SVPEAIRTGVRNNMGGHANHTMFWQIMGPNGGKA-DGDVLAAIDSDLGGMEKFQTDFNAA 157 SVPE IR VRN+ GGHANHT+FW I+ PNGG A GD+ +AI+S+ G + F+ FNAA Sbjct: 63 SVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGDLKSAIESEFGTFDDFKEKFNAA 122 Query: 158 GGRVFGSGWVFVTVTKDGKLAIETRPNQDNPIMDGKRALLGNDVWEHAYYLTYQNRRPDY 217 FGSGW ++ V +GKL I + NQD+P+ DGK +LG DVWEHAYYL +QNRRP+Y Sbjct: 123 AAARFGSGWAWLVVN-NGKLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEY 181 Query: 218 LKAWWNTVNWKAVAERYAAAK 238 + +WN VNW +R+ AAK Sbjct: 182 IDTFWNVVNWDEANKRFDAAK 202 >BS_sodA [P] COG0605 Superoxide dismutase Bsu Bacillus subtilis Length = 226 Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/204 (52%), Positives = 138/204 (67%), Gaps = 2/204 (0%) Query: 39 FKIDPLAYPTNALEPHIDAKTMEIHHDRHHQAYVTNLNNFAKDNPQIAEKPVVEVLANLG 98 +++ L Y +ALEPHID +TM IHH +HH YVTNLN + N +A K V E++A+L Sbjct: 3 YELPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADLD 62 Query: 99 SVPEAIRTGVRNNMGGHANHTMFWQIMGPN-GGKADGDVLAAIDSDLGGMEKFQTDFNAA 157 SVPE IRT VRNN GGHANH +FW ++ PN GG+ G + I+S G +KF+ F AA Sbjct: 63 SVPENIRTAVRNNGGGHANHKLFWTLLSPNGGGEPTGALAEEINSVFGSFDKFKEQFAAA 122 Query: 158 GGRVFGSGWVFVTVTKDGKLAIETRPNQDNPIMDGKRALLGNDVWEHAYYLTYQNRRPDY 217 FGSGW ++ V +GKL I + PNQD+P+ +GK +LG DVWEHAYYL YQNRRPDY Sbjct: 123 AAGRFGSGWAWL-VVNNGKLEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPDY 181 Query: 218 LKAWWNTVNWKAVAERYAAAKAGT 241 + A+WN VNW VA Y+ GT Sbjct: 182 ISAFWNVVNWDEVARLYSDENNGT 205