BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0037.p (203 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc01917 [C] COG1905 NADH Sme Sinorhizobium meliloti 266 2e-71 AGc2348_1 [C] COG1905 NADH Atu Agrobacterium tumefaciens strain ... 263 2e-70 BMEI1154 [C] COG1905 NADH Bme Brucella melitensis 261 9e-70 mll1366_1 [C] COG1905 NADH Mlo Mesorhizobium loti 227 2e-59 CC1950 [C] COG1905 NADH Ccr Caulobacter vibrioides 209 3e-54 >SMc01917 [C] COG1905 NADH Sme Sinorhizobium meliloti Length = 275 Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 126/202 (62%), Positives = 156/202 (77%), Gaps = 3/202 (1%) Query: 1 MSVRRLAPKELQPASFTFTDENLAWAKKQIEKYPPGRQASAAIAILWRVQEQHDGWVSEA 60 MSVRRLA +QPA+F F+ EN AWA+ I+KYP GR+ SA I +L R QEQ DGWV+ A Sbjct: 1 MSVRRLAEDTVQPAAFAFSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQ-DGWVTRA 59 Query: 61 AIRAVADLLEMPHIRMLEIATFYTMFQLSPVGKKAHVQVCGTTPCRLRGAADLIEVCQHR 120 AI +VAD+L M +IR+LE+ATFYT FQL PVG +AHVQVCGTTPC LRGA DLI++C+ + Sbjct: 60 AIESVADMLGMAYIRVLEVATFYTQFQLQPVGTRAHVQVCGTTPCMLRGAEDLIKICKKK 119 Query: 121 IHHDPFQLSKDGNFSWEEVECLGACVNAPMVLIWKDTYEDLTKESFGKVLDGFAAGNPPK 180 I +PF L++ G SWEEVEC GACVNAPMV+I+KDT+EDLT E +++D F AG + Sbjct: 120 IASEPFTLNEGGTLSWEEVECQGACVNAPMVMIFKDTFEDLTPERLEEIIDRFEAGKGSE 179 Query: 181 --PGPQIDRQFSAPAGGPTTLK 200 PGPQIDR +SAP GG TTL+ Sbjct: 180 VVPGPQIDRVYSAPIGGLTTLQ 201 >AGc2348_1 [C] COG1905 NADH Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 248 Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 125/203 (61%), Positives = 150/203 (73%), Gaps = 3/203 (1%) Query: 1 MSVRRLAPKELQPASFTFTDENLAWAKKQIEKYPPGRQASAAIAILWRVQEQHDGWVSEA 60 MSVRRLA + QP +F F +N AWA+K I+KYP GRQ SA I +L R QEQ DGWV+ A Sbjct: 1 MSVRRLAEDQFQPVAFAFNADNTAWAEKTIQKYPAGRQQSAVIPLLMRAQEQ-DGWVTRA 59 Query: 61 AIRAVADLLEMPHIRMLEIATFYTMFQLSPVGKKAHVQVCGTTPCRLRGAADLIEVCQHR 120 AI VAD+L+M +IR+LE+ATFYT FQL PVG +AHVQVCGTTPC LRG+ L++VC+ + Sbjct: 60 AIEKVADMLDMAYIRVLEVATFYTQFQLKPVGTRAHVQVCGTTPCMLRGSEALMDVCRKK 119 Query: 121 IHHDPFQLSKDGNFSWEEVECLGACVNAPMVLIWKDTYEDLTKESFGKVLDGFAA--GNP 178 IHHDP + G SWEEVEC GACVNAPMV+I+KD YEDLT E +++D F A G+ Sbjct: 120 IHHDPLHTNDSGTLSWEEVECQGACVNAPMVIIFKDAYEDLTPERLEEIIDTFEAGKGDT 179 Query: 179 PKPGPQIDRQFSAPAGGPTTLKE 201 K GPQIDR S P GG TTL E Sbjct: 180 VKTGPQIDRHESVPVGGLTTLTE 202 >BMEI1154 [C] COG1905 NADH Bme Brucella melitensis Length = 237 Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 125/203 (61%), Positives = 150/203 (73%), Gaps = 3/203 (1%) Query: 1 MSVRRLAPKELQPASFTFTDENLAWAKKQIEKYPPGRQASAAIAILWRVQEQHDGWVSEA 60 MSVRRLA +QPA+F F EN AWA K I KYP GRQ SA I +L R QEQ +GWV++A Sbjct: 1 MSVRRLADDAVQPATFAFNAENEAWAHKTIAKYPEGRQQSAVIPLLMRAQEQ-EGWVTKA 59 Query: 61 AIRAVADLLEMPHIRMLEIATFYTMFQLSPVGKKAHVQVCGTTPCRLRGAADLIEVCQHR 120 +I VA +L MP IR+LE+ATFYT FQL PVG +AH+QVCGTTPC LRG+ L++VC+H+ Sbjct: 60 SIEYVAAMLNMPLIRVLEVATFYTQFQLKPVGSRAHIQVCGTTPCMLRGSEALMDVCRHK 119 Query: 121 IHHDPFQLSKDGNFSWEEVECLGACVNAPMVLIWKDTYEDLTKESFGKVLDGFAA--GNP 178 IHHDPF+L+ DG SWEEVEC GAC NAPMV+I+KD YEDLT E +++D F A G+ Sbjct: 120 IHHDPFELNADGTLSWEEVECQGACANAPMVMIFKDAYEDLTPERLAEIIDAFEAGKGDT 179 Query: 179 PKPGPQIDRQFSAPAGGPTTLKE 201 KPGPQ R S PA G T L E Sbjct: 180 IKPGPQDGRVTSEPASGLTALTE 202 >mll1366_1 [C] COG1905 NADH Mlo Mesorhizobium loti Length = 200 Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 116/201 (57%), Positives = 145/201 (72%), Gaps = 3/201 (1%) Query: 1 MSVRRLAPKELQPASFTFTDENLAWAKKQIEKYPPGRQASAAIAILWRVQEQHDGWVSEA 60 MSVRRLA +QP SF F N A AK+ I+KYP GR+ SA I +L QEQ +GWV++A Sbjct: 1 MSVRRLAEASVQPVSFAFNRANAAAAKQWIKKYPKGREQSAIIPLLMLAQEQ-EGWVTKA 59 Query: 61 AIRAVADLLEMPHIRMLEIATFYTMFQLSPVGKKAHVQVCGTTPCRLRGAADLIEVCQHR 120 AI ++D+L MP IR LE+ATFYT +QL+PVG +AH+QVCGTTPC LRG+ L++VC+ + Sbjct: 60 AIETISDMLGMPRIRGLEVATFYTQYQLNPVGTRAHIQVCGTTPCMLRGSEALMDVCRSK 119 Query: 121 IHHDPFQLSKDGNFSWEEVECLGACVNAPMVLIWKDTYEDLTKESFGKVLDGFAAGNPPK 180 IHHD F + G SWEEVECLGACVNAPMV+I+KDT+EDLT E +++D + AG Sbjct: 120 IHHDQFHTNDKGTLSWEEVECLGACVNAPMVMIFKDTFEDLTPERLAEIIDLYDAGKGAS 179 Query: 181 --PGPQIDRQFSAPAGGPTTL 199 PGPQ R S PA G TTL Sbjct: 180 VAPGPQNGRTGSEPASGLTTL 200 >CC1950 [C] COG1905 NADH Ccr Caulobacter vibrioides Length = 228 Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 116/204 (56%), Positives = 137/204 (67%), Gaps = 10/204 (4%) Query: 1 MSVRRLAPKELQPASFTFTDENLAWAKKQIEKYPPGRQASAAIAILWRVQEQHDGWVSEA 60 MSVRRLA + QPASF F+ ++ A A KYP R+ SA I +LW Q+Q +GW+SE Sbjct: 1 MSVRRLAKE--QPASFAFSKDSQAKADWWKAKYPAERKQSAVIPMLWLAQKQ-EGWISEP 57 Query: 61 AIRAVADLLEMPHIRMLEIATFYTMFQLSPVGKKAHVQVCGTTPCRLRGAADLIEVCQHR 120 AI+ +A LEMP IR+LE+ATFY MFQL PVGK A VQ+CGTTPC+LRGA DL +V + + Sbjct: 58 AIQEIAKQLEMPVIRVLEVATFYVMFQLQPVGKVAFVQLCGTTPCQLRGALDLRKVLEDK 117 Query: 121 I---HHDPFQLSKDGNFSWEEVECLGACVNAPMVLIWKDTYEDLTKESFGKVLDGFAAGN 177 I HH +S DG FSWEEVECLGAC NAPM I YEDLT ES K+LD FAAG Sbjct: 118 IGPAHH----VSADGKFSWEEVECLGACCNAPMAAINDYYYEDLTPESLAKILDDFAAGK 173 Query: 178 PPKPGPQIDRQFSAPAGGPTTLKE 201 PKPG R S P G TL + Sbjct: 174 APKPGSYEGRGASEPKGAIHTLTD 197