BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0053.0033.p         (121 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll1372 [C] COG0838 NADH Mlo Mesorhizobium loti                       206   9e-54
AGc2340 [C] COG0838 NADH Atu Agrobacterium tumefaciens strain C5...   199   1e-51
BMEI1158 [C] COG0838 NADH Bme Brucella melitensis                     196   8e-51
SMc01912 [C] COG0838 NADH Sme Sinorhizobium meliloti                  194   4e-50
CC1956 [C] COG0838 NADH Ccr Caulobacter vibrioides                    174   4e-44

>mll1372 [C] COG0838 NADH Mlo Mesorhizobium loti
          Length = 121

 Score =  206 bits (524), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 97/121 (80%), Positives = 113/121 (93%)

Query: 1   MTGILQNYLPLVVFIGVASLIGLALLIAPFLVAFQSPDPEKLSAYECGFNAFDDARMKFD 60
           M  +L +YLP+V+FIGVA ++GLALL APFLVA+++PDPEKLSAYECGFN+FDDARMKFD
Sbjct: 1   MNALLSSYLPIVLFIGVALVVGLALLAAPFLVAYRNPDPEKLSAYECGFNSFDDARMKFD 60

Query: 61  VRFYLVAILFIIFDLEVAFLFPWAVAFGKLGATGFWSMMVFLAVLTVGFAYEWKKGALQW 120
           +RFYLV+ILFIIFDLEVAFLFPWAV+F K+G  GFWSMMVFLAVLT+GFAYEWKKGAL+W
Sbjct: 61  IRFYLVSILFIIFDLEVAFLFPWAVSFSKIGMLGFWSMMVFLAVLTIGFAYEWKKGALEW 120

Query: 121 D 121
           D
Sbjct: 121 D 121


>AGc2340 [C] COG0838 NADH Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 121

 Score =  199 bits (506), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 94/120 (78%), Positives = 112/120 (93%)

Query: 1   MTGILQNYLPLVVFIGVASLIGLALLIAPFLVAFQSPDPEKLSAYECGFNAFDDARMKFD 60
           MT +L +Y+P+ +FIG+A +IGLALLIAPF VA+++PDPEKLSA+ECGFNAFDDARMKFD
Sbjct: 1   MTELLSSYIPIAIFIGIALVIGLALLIAPFAVAYKAPDPEKLSAFECGFNAFDDARMKFD 60

Query: 61  VRFYLVAILFIIFDLEVAFLFPWAVAFGKLGATGFWSMMVFLAVLTVGFAYEWKKGALQW 120
           +RFYLV+ILFIIFDLEVAFLFPWAV+FG++G  GFWSMMVFLAVLT+GF YEWKKGAL+W
Sbjct: 61  IRFYLVSILFIIFDLEVAFLFPWAVSFGEMGWFGFWSMMVFLAVLTIGFIYEWKKGALEW 120


>BMEI1158 [C] COG0838 NADH Bme Brucella melitensis
          Length = 121

 Score =  196 bits (499), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 94/121 (77%), Positives = 110/121 (90%)

Query: 1   MTGILQNYLPLVVFIGVASLIGLALLIAPFLVAFQSPDPEKLSAYECGFNAFDDARMKFD 60
           M  +L +YLP+V+F+GVA +IG ALL+APFLVA++ PDPEKLSAYECGFNAFDDARMKFD
Sbjct: 1   MNELLSSYLPIVIFLGVAIVIGAALLVAPFLVAYRQPDPEKLSAYECGFNAFDDARMKFD 60

Query: 61  VRFYLVAILFIIFDLEVAFLFPWAVAFGKLGATGFWSMMVFLAVLTVGFAYEWKKGALQW 120
           +RFYLV+ILFIIFDLEVAFLFPWAV+FG++G  GF SMMVFL VLT+GF YEWKKGAL+W
Sbjct: 61  IRFYLVSILFIIFDLEVAFLFPWAVSFGQIGWFGFLSMMVFLGVLTIGFIYEWKKGALEW 120

Query: 121 D 121
           D
Sbjct: 121 D 121


>SMc01912 [C] COG0838 NADH Sme Sinorhizobium meliloti
          Length = 121

 Score =  194 bits (493), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 94/121 (77%), Positives = 110/121 (90%)

Query: 1   MTGILQNYLPLVVFIGVASLIGLALLIAPFLVAFQSPDPEKLSAYECGFNAFDDARMKFD 60
           MT +L +Y+P+ +FIG+A +IGLALL+APF VAF++PD EKLSAYECGFNAFDDARMKFD
Sbjct: 1   MTELLGSYVPIAIFIGIALVIGLALLVAPFAVAFKAPDSEKLSAYECGFNAFDDARMKFD 60

Query: 61  VRFYLVAILFIIFDLEVAFLFPWAVAFGKLGATGFWSMMVFLAVLTVGFAYEWKKGALQW 120
           VRFYLV+ILFIIFDLEVAFLFPWAV+F ++G  GFWSMMVFL VLTVGF YEWKKGAL+W
Sbjct: 61  VRFYLVSILFIIFDLEVAFLFPWAVSFKEMGWFGFWSMMVFLLVLTVGFIYEWKKGALEW 120

Query: 121 D 121
           +
Sbjct: 121 N 121


>CC1956 [C] COG0838 NADH Ccr Caulobacter vibrioides
          Length = 125

 Score =  174 bits (441), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 101/125 (80%), Gaps = 4/125 (3%)

Query: 1   MTGILQNYLPLVVFIGVASLIGLALLIAPFLVAFQSPDPEKLSAYECGFNAFDDARMKFD 60
           MT  L  YLP+V+F+G+A+ IG+  L+A  ++A ++PDPEKLSAYECGFNAFDDARMKFD
Sbjct: 1   MTAFLLQYLPIVIFLGIAAAIGIVFLLAAAVLAPKAPDPEKLSAYECGFNAFDDARMKFD 60

Query: 61  VRFYLVAILFIIFDLEVAFLFPWAVAFGKLGAT----GFWSMMVFLAVLTVGFAYEWKKG 116
           VRFYLV+ILFIIFDLEVAFLFPWAV   KL        FWSMM FL VLTVGF YEWKKG
Sbjct: 61  VRFYLVSILFIIFDLEVAFLFPWAVTLMKLPQDVAQFAFWSMMTFLGVLTVGFIYEWKKG 120

Query: 117 ALQWD 121
           AL+W+
Sbjct: 121 ALEWE 125