BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0053.0014.p         (112 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0437 [GEPR] COG0477 Permeases of the major facilitator superf...   109   1e-24
BMEII0515 [GEPR] COG0477 Permeases of the major facilitator supe...   105   2e-23
mll8382 [GEPR] COG0477 Permeases of the major facilitator superf...   104   5e-23
yceE [GEPR] COG0477 Permeases of the major facilitator superfami...    77   1e-14
CAP0029 [GEPR] COG0477 Permeases of the major facilitator superf...    74   7e-14

>RSp0437 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
          Ralstonia solanacearum
          Length = 406

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/65 (73%), Positives = 58/65 (89%)

Query: 15 PWKRNLIVCVFGSFTTIVGMTLLLPFLPLYVEQLGVTDHAAIVQWSGVAYGATFFSAALT 74
          PW+RNL+VC+FGSF+T++ MTL+LPFLP+YVEQLGV  HAAIVQWSGVA+GATF +A LT
Sbjct: 8  PWRRNLVVCLFGSFSTVLAMTLMLPFLPIYVEQLGVIGHAAIVQWSGVAFGATFVTAGLT 67

Query: 75 APPCG 79
          AP  G
Sbjct: 68 APLWG 72


>BMEII0515 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme
           Brucella melitensis
          Length = 429

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 46/64 (71%), Positives = 55/64 (85%)

Query: 16  WKRNLIVCVFGSFTTIVGMTLLLPFLPLYVEQLGVTDHAAIVQWSGVAYGATFFSAALTA 75
           WK+NL++C+ GSFTT++ M+LLLPFLPLYVEQLGV  HAAIVQWSG+AYGATF +AA  A
Sbjct: 42  WKQNLVICLLGSFTTLIAMSLLLPFLPLYVEQLGVISHAAIVQWSGIAYGATFLAAAFVA 101

Query: 76  PPCG 79
           P  G
Sbjct: 102 PLWG 105


>mll8382 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo
          Mesorhizobium loti
          Length = 417

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 54/64 (84%)

Query: 16 WKRNLIVCVFGSFTTIVGMTLLLPFLPLYVEQLGVTDHAAIVQWSGVAYGATFFSAALTA 75
          W+RNL VC  GSF+T++ MTLLLPFLPLYVEQLG   HAAIVQWSG+AYGATFF+AAL A
Sbjct: 15 WRRNLAVCFAGSFSTLIAMTLLLPFLPLYVEQLGAQGHAAIVQWSGIAYGATFFAAALVA 74

Query: 76 PPCG 79
          P  G
Sbjct: 75 PLWG 78


>yceE [GEPR] COG0477 Permeases of the major facilitator superfamily Eco
          Escherichia coli K12
          Length = 408

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/61 (54%), Positives = 43/61 (70%)

Query: 16 WKRNLIVCVFGSFTTIVGMTLLLPFLPLYVEQLGVTDHAAIVQWSGVAYGATFFSAALTA 75
          WKRNLIV   G F T    +L++PFLPLYVEQLGVT H+A+  WSG+ +  TF  +A+ +
Sbjct: 12 WKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVFSITFLFSAIAS 71

Query: 76 P 76
          P
Sbjct: 72 P 72


>CAP0029 [GEPR] COG0477 Permeases of the major facilitator superfamily Cac
          Clostridium acetobutylicum
          Length = 399

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 7/81 (8%)

Query: 16 WKRNLIVCVFGSFTTIVGMTLLLPFLPLYVEQLGVTDHAAIVQWSGVAYGATFFSAALTA 75
          WK+NLIVC FG F T +GM+ + P LPLY+  LGV   + + ++SG+A+G TF  +A+ +
Sbjct: 4  WKKNLIVCWFGMFITSIGMSQIAPVLPLYIRHLGVNSSSLVEEFSGIAFGITFIVSAIFS 63

Query: 76 PPCGTARRSLRPQADADPRQP 96
          P  G A       AD   R+P
Sbjct: 64 PIWGQA-------ADKFGRKP 77