BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0013.p (296 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll8382 [GEPR] COG0477 Permeases of the major facilitator superf... 384 e-106 RSp0437 [GEPR] COG0477 Permeases of the major facilitator superf... 357 1e-98 BMEII0515 [GEPR] COG0477 Permeases of the major facilitator supe... 357 2e-98 CAP0029 [GEPR] COG0477 Permeases of the major facilitator superf... 208 2e-53 lin2884 [GEPR] COG0477 Permeases of the major facilitator superf... 204 2e-52 >mll8382 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 417 Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust. Identities = 213/301 (70%), Positives = 243/301 (80%), Gaps = 5/301 (1%) Query: 1 MAHNVYELVSLRLLTGLLGGYASGSTVLVAAQTPKARSGWAIGVLSAGIMAGSLVGPLIG 60 M V++LV LRLL G GGY+SGST+LVA QTPK RSGWA+GVLSAGI AGSLVGPL+G Sbjct: 106 MVETVWQLVLLRLLIGFAGGYSSGSTILVAMQTPKDRSGWALGVLSAGITAGSLVGPLMG 165 Query: 61 GVLPGLIGIRATFFLIGGVIFFTFLGTTFLIREEARPK----AKGGKARGGWSLVPDKRP 116 G LP +IGIRATF L GGVIF FL TTFLI+E RPK KG + + GWS +PDKRP Sbjct: 166 GALPPVIGIRATFLLSGGVIFLAFLATTFLIKETPRPKPVKAEKGARPKSGWSRIPDKRP 225 Query: 117 VVAMWGTGLLLMVANMSIEPIITVYVAQLV-DAPQVTFVAGLVMSAAAFGSLLSSSHLGK 175 VVAM TG+LL ANMSIEPIITVYV QL+ D +VT VAG+VMSAAA G++LS+S LGK Sbjct: 226 VVAMLITGMLLAFANMSIEPIITVYVQQLIEDQSRVTMVAGVVMSAAALGTILSASWLGK 285 Query: 176 LADRVGHWRIITICLAVSALLLIPQAFVVSGWQLILLRFLMGLALGGLLPCIASVIRHNV 235 LADRVGHW ++ LAVSALLLIPQAFV +GWQLI LRFLMGLALGGLLPCI SVIRHN+ Sbjct: 286 LADRVGHWNVVVGALAVSALLLIPQAFVTNGWQLIGLRFLMGLALGGLLPCITSVIRHNI 345 Query: 236 PDAVTGSMLGYSISAQYAGQVIGPLAGGFIGGHIGMSAVFLGTSVLMALGAIGNFIVEKK 295 PD V G++LG +ISAQY GQV GPL GGF+GGH GM AVFLGTSVLMA GA+ N+IV+ + Sbjct: 346 PDGVGGNVLGLAISAQYVGQVAGPLTGGFVGGHFGMRAVFLGTSVLMAGGAVYNWIVQSR 405 Query: 296 E 296 Sbjct: 406 R 406 >RSp0437 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 406 Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 186/287 (64%), Positives = 232/287 (80%), Gaps = 2/287 (0%) Query: 1 MAHNVYELVSLRLLTGLLGGYASGSTVLVAAQTPKARSGWAIGVLSAGIMAGSLVGPLIG 60 +A N+++LV+LRLL GL GGYASG+T+LVA QTPKARSGWA+GVL++G+MAG+LVGPL+G Sbjct: 100 LATNIWQLVALRLLVGLAGGYASGATILVAVQTPKARSGWALGVLASGVMAGNLVGPLVG 159 Query: 61 GVLPGLIGIRATFFLIGGVIFFTFLGTTFLIREEARPKAKGGKARGGWSLVPDKRPVVAM 120 G LP +IG+RATF+ GG+IF +FL T +L+RE +P + + W+ VP+KR V+AM Sbjct: 160 GALPPMIGMRATFWCAGGLIFVSFLATAWLVREAQKPP-EAVRTVASWAQVPNKRAVIAM 218 Query: 121 WGTGLLLMVANMSIEPIITVYVAQLVDAP-QVTFVAGLVMSAAAFGSLLSSSHLGKLADR 179 GL+LMVANMSIEPIITVYV +LV P +VTFVAGLVMSAAA GS+LS+S LGKLADR Sbjct: 219 LLAGLMLMVANMSIEPIITVYVQRLVSDPRKVTFVAGLVMSAAALGSVLSASQLGKLADR 278 Query: 180 VGHWRIITICLAVSALLLIPQAFVVSGWQLILLRFLMGLALGGLLPCIASVIRHNVPDAV 239 +GH +I LA + LLLIPQA V + WQLI LRF MGLALGGLLPCIA+V+RHNVPD + Sbjct: 279 IGHSTVIITALASAGLLLIPQALVTASWQLIGLRFAMGLALGGLLPCIAAVLRHNVPDPL 338 Query: 240 TGSMLGYSISAQYAGQVIGPLAGGFIGGHIGMSAVFLGTSVLMALGA 286 G ++GY++S Q+AGQV+GPLAGGF+GGH GM AVF T L+ LGA Sbjct: 339 VGKVMGYALSFQFAGQVVGPLAGGFVGGHAGMRAVFFMTGGLLLLGA 385 >BMEII0515 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme Brucella melitensis Length = 429 Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 199/303 (65%), Positives = 238/303 (78%), Gaps = 7/303 (2%) Query: 1 MAHNVYELVSLRLLTGLLGGYASGSTVLVAAQTPKARSGWAIGVLSAGIMAG----SLVG 56 M V++LV+LRL G+ GGY+SGS +LVA QTPK ++GWA+G LSAGIMAG +L G Sbjct: 124 MVTCVWQLVALRLFVGIAGGYSSGSMILVATQTPKDKTGWALGALSAGIMAGIMAGNLAG 183 Query: 57 PLIGGVLPGLIGIRATFFLIGGVIFFTFLGTTFLIREEARPK--AKGGKARGGWSLVPDK 114 PL+GG LP LIGIRATF+L GGVIF TFL TTFLIREE +P + K + W+ +PDK Sbjct: 184 PLLGGALPPLIGIRATFWLAGGVIFLTFLATTFLIREERKPPKPTREEKTQSIWAAIPDK 243 Query: 115 RPVVAMWGTGLLLMVANMSIEPIITVYVAQLVD-APQVTFVAGLVMSAAAFGSLLSSSHL 173 PVVAM TG+LL+ ANMSIEPI+T+YV QL+D +VT V+G+VM+AAA GS+LSSS L Sbjct: 244 GPVVAMLVTGILLLFANMSIEPILTIYVMQLMDDQTKVTLVSGVVMAAAALGSILSSSRL 303 Query: 174 GKLADRVGHWRIITICLAVSALLLIPQAFVVSGWQLILLRFLMGLALGGLLPCIASVIRH 233 G+LADR+GH R+I LAVSALLL+PQAFV WQLI LRFLMGLALGGLLPCI SVIRH Sbjct: 304 GQLADRIGHTRVIIGALAVSALLLVPQAFVTDAWQLIGLRFLMGLALGGLLPCITSVIRH 363 Query: 234 NVPDAVTGSMLGYSISAQYAGQVIGPLAGGFIGGHIGMSAVFLGTSVLMALGAIGNFIVE 293 NVPD V G +LGYS+SAQY GQV GP+AGGF+GGH GM AVFLGT ++MA GAI N+ V Sbjct: 364 NVPDRVAGGILGYSVSAQYVGQVAGPVAGGFVGGHFGMRAVFLGTCLMMAAGAIYNWAVL 423 Query: 294 KKE 296 + Sbjct: 424 RNS 426 >CAP0029 [GEPR] COG0477 Permeases of the major facilitator superfamily Cac Clostridium acetobutylicum Length = 399 Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 116/295 (39%), Positives = 180/295 (61%), Gaps = 3/295 (1%) Query: 4 NVYELVSLRLLTGLLGGYASGSTVLVAAQTPKARSGWAIGVLSAGIMAGSLVGPLIGGVL 63 NVY L+ LRLL G++ GY++ T L+A QT K +GWA+G LS +AGSL+GP IGG + Sbjct: 98 NVYVLIVLRLLQGVITGYSTACTTLIATQTDKEHAGWALGTLSTAGIAGSLLGPTIGGFV 157 Query: 64 PGLIGIRATFFLIGGVIFFTFLGTTFLIREE-ARPKAKGGKARGGWSLVPDKRPVVAMWG 122 G + FF+ G ++ F+ T ++E+ R K + W+ VP+K + + Sbjct: 158 EEAFGTQNVFFITGALLIIVFIATMLFVKEDFVRENKKVDSMKKVWNSVPEKSLTITILV 217 Query: 123 TGLLLMVANMSIEPIITVYVAQLV-DAPQVTFVAGLVMSAAAFGSLLSSSHLGKLADRVG 181 T +L +A SIEPI+T YV++L + V F+AGLV SA+ +++++ LGK++D++G Sbjct: 218 TFFILTLALYSIEPIMTEYVSKLSRNTSHVAFIAGLVFSASGLANIVAAPRLGKISDKIG 277 Query: 182 HWRIITICLAVSALLLIPQAFVVSGWQLILLRFLMGLALGGLLPCIASVIRHNVPDAVTG 241 +I+ L V+ ++ IPQAFV + WQL+ RFL+GLA GGL P + +++ P A+TG Sbjct: 278 PHKIMLGALIVAGIVFIPQAFVKNPWQLMFFRFLLGLASGGLTPSVNILVKKITPTAITG 337 Query: 242 SMLGYSISAQYAGQVIGPLAGGFIGGHIGMSAVFLGTSVLMALGAIG-NFIVEKK 295 + G S+SA Y G G + GG + ++G+ VF TS L+ + A+ F V KK Sbjct: 338 RIFGLSMSAGYLGVFGGSVLGGQVSAYLGIRYVFFITSSLLLINAVWVYFKVYKK 392 >lin2884 [GEPR] COG0477 Permeases of the major facilitator superfamily Lin Listeria innocua Length = 402 Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 110/298 (36%), Positives = 173/298 (58%), Gaps = 3/298 (1%) Query: 1 MAHNVYELVSLRLLTGLLGGYASGSTVLVAAQTPKARSGWAIGVLSAGIMAGSLVGPLIG 60 + NVY+ V LRLL G+ GY S + L+A Q P+ RSGWA+G LS ++G L+GPLIG Sbjct: 95 LVSNVYQFVGLRLLMGIFSGYISTANALIATQVPRHRSGWALGALSTAAVSGVLIGPLIG 154 Query: 61 GVLPGLIGIRATFFLIGGVIFFTFLGTTFLIREEARPKAKGGKARGGWSLVPDKRP--VV 118 G L G+R F++ G ++ +F T F ++E+ P K G + K P ++ Sbjct: 155 GALSDSFGVRPVFYITGALLLGSFFLTLFFVKEKFTPVEKKEMRSGKEVFLSLKNPGLII 214 Query: 119 AMWGTGLLLMVANMSIEPIITVYVAQLV-DAPQVTFVAGLVMSAAAFGSLLSSSHLGKLA 177 +++ T +++ +A+ S+ PI+T+YV L +A + F++G++ S +L+++ LG+ Sbjct: 215 SLFITTMMIQIASNSVNPILTLYVRDLAGNAQNIAFISGMIASVPGVAALIAAPRLGRWG 274 Query: 178 DRVGHWRIITICLAVSALLLIPQAFVVSGWQLILLRFLMGLALGGLLPCIASVIRHNVPD 237 DR+G RI+ L S LL IP AF + QL +LRFL+GL G LLP + S++ N P Sbjct: 275 DRIGSERILLGALIGSMLLQIPMAFAQNPMQLGILRFLLGLTDGALLPAVQSLLTKNTPR 334 Query: 238 AVTGSMLGYSISAQYAGQVIGPLAGGFIGGHIGMSAVFLGTSVLMALGAIGNFIVEKK 295 ++G + GY+ S QY G VIGPL G + H G VFL + + + + +F +K Sbjct: 335 EISGRIFGYNQSFQYIGNVIGPLVGSSVAAHFGYGDVFLVVAGFIFINVLISFYFNRK 392