BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0011.p (352 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc01905 [O] COG0466 ATP-dependent Lon protease, bacterial type ... 424 e-118 AGc2329 [O] COG0466 ATP-dependent Lon protease, bacterial type A... 416 e-116 BMEI0876 [O] COG0466 ATP-dependent Lon protease, bacterial type ... 394 e-109 mlr8476 [O] COG0466 ATP-dependent Lon protease, bacterial type M... 393 e-109 CC1960 [O] COG0466 ATP-dependent Lon protease, bacterial type Cc... 377 e-104 >SMc01905 [O] COG0466 ATP-dependent Lon protease, bacterial type Sme Sinorhizobium meliloti Length = 806 Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust. Identities = 214/281 (76%), Positives = 240/281 (85%), Gaps = 1/281 (0%) Query: 14 ESHSYPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMKNDALIMLATQKNASDDDPAPD 73 ES +YPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVM D IML TQ NA+DDDP P Sbjct: 10 ESATYPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGTDKQIMLVTQINATDDDPEPS 69 Query: 74 SIYETGTLASVLQLLKLPDGTVKVLVEGLERARVEKYSDRSEYYEATAVALADTDANSVE 133 +IY+ GT+A+VLQLLKLPDGTVKVLVEG RA +E+Y+ R ++YEA A AL + D + VE Sbjct: 70 AIYKVGTIANVLQLLKLPDGTVKVLVEGRSRAEIERYTPRDDFYEAMAHALPEPDEDPVE 129 Query: 134 AEALARSVVSDFESYVKLNKKISAEVVGVVQAITDFAKLGDTVASHLAVKIADRQAILET 193 EAL+RSVVS+FESYVKLNKKIS EVVGV I D++KL DTVASHL++KI ++Q +LET Sbjct: 130 IEALSRSVVSEFESYVKLNKKISPEVVGVASQIEDYSKLADTVASHLSIKIVEKQEMLET 189 Query: 194 LSVTQRLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDDE- 252 SV RLEK LG ME EISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGD E Sbjct: 190 TSVKMRLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDSED 249 Query: 253 GRDELADLEEKISKTKLSKEAREKAQHELKKLRQMSPMSGK 293 GRDE+A+LEE+ISKTKLSKEAREKA ELKKLRQMSPMS + Sbjct: 250 GRDEMAELEERISKTKLSKEAREKADAELKKLRQMSPMSAE 290 >AGc2329 [O] COG0466 ATP-dependent Lon protease, bacterial type Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 805 Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust. Identities = 207/276 (75%), Positives = 240/276 (86%), Gaps = 1/276 (0%) Query: 17 SYPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMKNDALIMLATQKNASDDDPAPDSIY 76 +YPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVM +D IML TQ NASDDDPAP++I+ Sbjct: 12 TYPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGSDKQIMLVTQINASDDDPAPEAIH 71 Query: 77 ETGTLASVLQLLKLPDGTVKVLVEGLERARVEKYSDRSEYYEATAVALADTDANSVEAEA 136 + GT+A+VLQLLKLPDGTVKVLVEG RA+++ Y+ R ++YEA+A L + + VE EA Sbjct: 72 KVGTVANVLQLLKLPDGTVKVLVEGKGRAQIDSYTGREDFYEASATPLQEPAEDPVEIEA 131 Query: 137 LARSVVSDFESYVKLNKKISAEVVGVVQAITDFAKLGDTVASHLAVKIADRQAILETLSV 196 L+RSVVS+FESYVKLNKKIS EVVG I D++KL DTVASHL++KI ++Q +LET+SV Sbjct: 132 LSRSVVSEFESYVKLNKKISPEVVGAAGQIDDYSKLADTVASHLSIKITEKQEMLETVSV 191 Query: 197 TQRLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDDE-GRD 255 QRLEK LG ME EISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGD E GRD Sbjct: 192 KQRLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRD 251 Query: 256 ELADLEEKISKTKLSKEAREKAQHELKKLRQMSPMS 291 E+A+LEE+I+KTKLSKEA+EKA E+KKLRQMSPMS Sbjct: 252 EMAELEERIAKTKLSKEAKEKADAEMKKLRQMSPMS 287 >BMEI0876 [O] COG0466 ATP-dependent Lon protease, bacterial type Bme Brucella melitensis Length = 823 Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/280 (75%), Positives = 240/280 (85%), Gaps = 1/280 (0%) Query: 13 GESHSYPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMKNDALIMLATQKNASDDDPAP 72 G Y VLPLRDIVVFPHMIVPLFVGREKSIRALEEVM D I+LATQKNA+DDDPAP Sbjct: 28 GADGLYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGVDKQILLATQKNAADDDPAP 87 Query: 73 DSIYETGTLASVLQLLKLPDGTVKVLVEGLERARVEKYSDRSEYYEATAVALADTDANSV 132 D+IYE GT+A+VLQLLKLPDGTVKVLVEG RA++ K++DR +Y+EA A AL + + ++V Sbjct: 88 DAIYEIGTIANVLQLLKLPDGTVKVLVEGTARAKISKFTDREDYHEAYAAALQEPEEDAV 147 Query: 133 EAEALARSVVSDFESYVKLNKKISAEVVGVVQAITDFAKLGDTVASHLAVKIADRQAILE 192 E EALARSVVSDFE+YVKLNKKIS EVVG I D++KL DTVASHLA+KI ++Q +L Sbjct: 148 EIEALARSVVSDFENYVKLNKKISPEVVGTASQIDDYSKLADTVASHLAIKIPEKQEMLS 207 Query: 193 TLSVTQRLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDDE 252 LSV +RLEK L ME+EISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGD E Sbjct: 208 VLSVRERLEKALSFMEAEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDSE 267 Query: 253 -GRDELADLEEKISKTKLSKEAREKAQHELKKLRQMSPMS 291 GRDE+A++EE+I+KTKLSKEAREKA ELKKLR MSPMS Sbjct: 268 DGRDEVAEIEERITKTKLSKEAREKALAELKKLRSMSPMS 307 >mlr8476 [O] COG0466 ATP-dependent Lon protease, bacterial type Mlo Mesorhizobium loti Length = 808 Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/275 (72%), Positives = 234/275 (85%), Gaps = 1/275 (0%) Query: 18 YPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMKNDALIMLATQKNASDDDPAPDSIYE 77 + VLPLRDIVVFPHMIVPLFVGREKSI+ALEEVM + I+LATQ NA+DDDP PD+I++ Sbjct: 18 FAVLPLRDIVVFPHMIVPLFVGREKSIKALEEVMGQEKQILLATQMNAADDDPEPDAIFD 77 Query: 78 TGTLASVLQLLKLPDGTVKVLVEGLERARVEKYSDRSEYYEATAVALADTDANSVEAEAL 137 GTLA+VLQLLKLPDGTVKVLVEG RA++ ++DR +++EA A AL + + VE EAL Sbjct: 78 IGTLANVLQLLKLPDGTVKVLVEGASRAKIVSFTDRPDFHEARATALVEPEEEEVEVEAL 137 Query: 138 ARSVVSDFESYVKLNKKISAEVVGVVQAITDFAKLGDTVASHLAVKIADRQAILETLSVT 197 ARSVV+DFE+YVKLNKKIS EVVG I D++KL DTVASHLA+KI ++Q +L TLSV Sbjct: 138 ARSVVTDFENYVKLNKKISPEVVGAASQIDDYSKLADTVASHLAIKIPEKQEMLATLSVK 197 Query: 198 QRLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDDE-GRDE 256 +RLEK +G ME+EISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELG+ E GRDE Sbjct: 198 ERLEKAMGFMEAEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGEGEDGRDE 257 Query: 257 LADLEEKISKTKLSKEAREKAQHELKKLRQMSPMS 291 A++E +I KTKLSKEAREKA+ ELKKLR MSPMS Sbjct: 258 AAEIEARIKKTKLSKEAREKAEAELKKLRTMSPMS 292 >CC1960 [O] COG0466 ATP-dependent Lon protease, bacterial type Ccr Caulobacter vibrioides Length = 799 Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust. Identities = 187/279 (67%), Positives = 223/279 (79%), Gaps = 1/279 (0%) Query: 14 ESHSYPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMKNDALIMLATQKNASDDDPAPD 73 E + PVLPLRDIVVFPHM+VPLFVGR+KS+RALEEVM+ D I+L TQKN++DDDPAP Sbjct: 3 ELRTLPVLPLRDIVVFPHMVVPLFVGRDKSVRALEEVMRGDKQILLVTQKNSADDDPAPG 62 Query: 74 SIYETGTLASVLQLLKLPDGTVKVLVEGLERARVEKYSDRSEYYEATAVALADTDANSVE 133 I+E G LA+VLQLLKLPDGTVKVLVEG RA V ++D+ YYEA +++ D E Sbjct: 63 DIFEVGVLATVLQLLKLPDGTVKVLVEGKARAAVVSFTDQESYYEAQIGEVSEDDGAGPE 122 Query: 134 AEALARSVVSDFESYVKLNKKISAEVVGVVQAITDFAKLGDTVASHLAVKIADRQAILET 193 AEAL+R+VV FE+YVKLNKK+ E + + I + KL D++A+HL+VKI D+Q +LE Sbjct: 123 AEALSRAVVEQFENYVKLNKKVPPEALASIPQIAEPGKLADSIAAHLSVKIGDKQNLLEI 182 Query: 194 LSVTQRLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGD-DE 252 V +RLEKV LME EISVLQVEK+IRSRVKRQMEKTQREYYLNEQMKAIQ+ELGD D+ Sbjct: 183 FDVVKRLEKVFALMEGEISVLQVEKKIRSRVKRQMEKTQREYYLNEQMKAIQRELGDPDD 242 Query: 253 GRDELADLEEKISKTKLSKEAREKAQHELKKLRQMSPMS 291 RDEL DLE++I KTKLSKEAR KA+ ELKKLR MSPMS Sbjct: 243 ARDELIDLEKRIKKTKLSKEARTKAESELKKLRNMSPMS 281