BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0052.0031.p         (366 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc2984 [F] COG0504 CTP synthase (UTP-ammonia lyase) Atu Agrobac...   244   2e-64
BMEI0849 [F] COG0504 CTP synthase (UTP-ammonia lyase) Bme Brucel...   242   9e-64
SMc01025 [F] COG0504 CTP synthase (UTP-ammonia lyase) Sme Sinorh...   239   7e-63
mll0606 [F] COG0504 CTP synthase (UTP-ammonia lyase) Mlo Mesorhi...   236   5e-62
CC1720 [F] COG0504 CTP synthase (UTP-ammonia lyase) Ccr Caulobac...   231   2e-60

>AGc2984 [F] COG0504 CTP synthase (UTP-ammonia lyase) Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 578

 Score =  244 bits (623), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 120/141 (85%), Positives = 134/141 (95%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARY+FITGGVVSSLGKG+A+AALGALLQ+RGY+VRLRKLDPYLN+DPGTMSP QHGEVF
Sbjct: 37  MARYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 96

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGR ATK DNITTGRIY++II KERRGDYLGAT+QV+PHVTN
Sbjct: 97  VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 156

Query: 121 AIKEFVLDGNDEYDFVLVEIG 141
            IK+FV +GND+YDFV+ EIG
Sbjct: 157 EIKDFVTEGNDDYDFVICEIG 177


>BMEI0849 [F] COG0504 CTP synthase (UTP-ammonia lyase) Bme Brucella
           melitensis
          Length = 542

 Score =  242 bits (618), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 119/141 (84%), Positives = 134/141 (95%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARY+FITGGVVSSLGKG+A+AAL ALLQARGY+VR+RKLDPYLN+DPGTMSPYQHGEVF
Sbjct: 1   MARYVFITGGVVSSLGKGIAAAALAALLQARGYRVRIRKLDPYLNVDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGRPA + DNITTGRIY++II KERRGDYLGAT+QV+PHVT+
Sbjct: 61  VTDDGAETDLDLGHYERFTGRPANQQDNITTGRIYRNIIEKERRGDYLGATVQVIPHVTD 120

Query: 121 AIKEFVLDGNDEYDFVLVEIG 141
            IK FVL+GN++YDFVL EIG
Sbjct: 121 EIKNFVLEGNEDYDFVLCEIG 141


>SMc01025 [F] COG0504 CTP synthase (UTP-ammonia lyase) Sme Sinorhizobium
           meliloti
          Length = 542

 Score =  239 bits (610), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 120/141 (85%), Positives = 133/141 (94%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARY+FITGGVVSSLGKG+A+AALGALLQARGY+VRLRKLDPYLN+DPGTMSP QHGEVF
Sbjct: 1   MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGR ATK DNITTGRIY++II KERRGDYLGAT+QV+PHVTN
Sbjct: 61  VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN 120

Query: 121 AIKEFVLDGNDEYDFVLVEIG 141
            IK FV +GN++YDFV+ EIG
Sbjct: 121 EIKNFVTEGNEDYDFVICEIG 141


>mll0606 [F] COG0504 CTP synthase (UTP-ammonia lyase) Mlo Mesorhizobium loti
          Length = 542

 Score =  236 bits (603), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 117/141 (82%), Positives = 133/141 (94%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           MARY+FITGGVVSSLGKG+A+AALGALLQARGY+ R++KLDPYLN+DPGTMSPYQHGEVF
Sbjct: 1   MARYVFITGGVVSSLGKGIAAAALGALLQARGYRARIKKLDPYLNVDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTGR A + DNITTGRIY++II +ERRGDYLGAT+QV+PHVT+
Sbjct: 61  VTDDGAETDLDLGHYERFTGRSANQQDNITTGRIYKNIIERERRGDYLGATVQVIPHVTD 120

Query: 121 AIKEFVLDGNDEYDFVLVEIG 141
            IK FVL+GND+YDFVL EIG
Sbjct: 121 EIKNFVLNGNDDYDFVLCEIG 141


>CC1720 [F] COG0504 CTP synthase (UTP-ammonia lyase) Ccr Caulobacter
           vibrioides
          Length = 550

 Score =  231 bits (588), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/165 (78%), Positives = 138/165 (83%), Gaps = 9/165 (5%)

Query: 1   MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNLDPGTMSPYQHGEVF 60
           M RYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLN+DPGTMSPYQHGEVF
Sbjct: 1   MTRYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVF 60

Query: 61  VTDDGAETDLDLGHYERFTGRPATKADNITTGRIYQDIISKERRGDYLGATIQVVPHVTN 120
           VTDDGAETDLDLGHYERFTG  ATKADNITTG+IY+ II KERRGDYLGAT+QV+PHVTN
Sbjct: 61  VTDDGAETDLDLGHYERFTGVSATKADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTN 120

Query: 121 AIKEFVLD------GNDEYDFVLVEIGDGGMADDVISIGHNFEAV 159
            IK+FVL       G    DFVLVEI  GG   D+  +   FEA+
Sbjct: 121 EIKDFVLSPAMDETGEKAVDFVLVEI--GGTVGDIEGLPF-FEAI 162