BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0052.0002.p (1250 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3875 [C] COG5013 Nitrate reductase alpha subunit Pae Pseudomon... 1846 0.0 narG [C] COG5013 Nitrate reductase alpha subunit Eco Escherichia... 1843 0.0 STM1764 [C] COG5013 Nitrate reductase alpha subunit Sty Salmonel... 1842 0.0 ZnarG [C] COG5013 Nitrate reductase alpha subunit EcZ Escherichi... 1841 0.0 ECs1729 [C] COG5013 Nitrate reductase alpha subunit Ecs Escheric... 1841 0.0 >PA3875 [C] COG5013 Nitrate reductase alpha subunit Pae Pseudomonas aeruginosa Length = 1261 Score = 1846 bits (4781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 861/1243 (69%), Positives = 1017/1243 (81%), Gaps = 7/1243 (0%) Query: 1 MSHFLDRLTFFTRAKPDFADGHGVTTTEDRSWKDGHRKRWQHDKIVRSTHGVNCTGSCSW 60 MSH LDRL FF + + +FADGHG T+ E R+W+ +R+RWQHDKIVRSTHGVNCTGSCSW Sbjct: 1 MSHLLDRLQFFKKKQGEFADGHGETSNESRAWEGAYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKGGIVTWETQQTDYPRTRPDLPNHEPRGCARGASYSWYLYSGNRVKYPLVRSRLLK 120 K+YVK G++TWETQQTDYPRTRPDLPNHEPRGC RGASYSWY+YS NR+KYP VR LLK Sbjct: 61 KIYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYIYSANRLKYPKVRKPLLK 120 Query: 121 LWREARAVM-TPVAAWKSIVEDPTKRAAYVQKRGLGGFVRASWAEVNEIVASANAYTAKT 179 LWREARA PV AW SIVED K +Y +RGLGGFVR+SW EV EI+A+AN YTAKT Sbjct: 121 LWREARAQHGDPVNAWASIVEDAAKAKSYKSQRGLGGFVRSSWDEVTEIIAAANVYTAKT 180 Query: 180 YGPDRVFGFSPIPAMSMVSYAAGARYLSLLGGVCMSFYDWYCDLPPASPQTWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYAAGARYLSL+GGVC+SFYDWYCDLPPASPQ WGEQTDVPE Sbjct: 181 YGPDRVIGFSPIPAMSMVSYAAGARYLSLIGGVCLSFYDWYCDLPPASPQIWGEQTDVPE 240 Query: 240 SADWYNAGFLILWGSNVPQTRTPDAHFYTEVRYKGAKSVVICPDYSEASKFADLWVSPKQ 299 SADWYN+ ++I WGSNVPQTRTPDAHF+TEVRYKG K+V I PDYSE +K DLW++PKQ Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVSITPDYSEVAKLTDLWLNPKQ 300 Query: 300 GTDAALAMAMGHVILKEFHVDRQARYFNDYARQYTDMPFLVRLVK-SEGRLVPERFVRAS 358 GTDAAL MA GHVILKEFH+DR + YF DY RQYTDMP LV L + + G P R++RA+ Sbjct: 301 GTDAALGMAFGHVILKEFHLDRPSAYFVDYCRQYTDMPMLVLLEEHAGGAFKPTRYLRAA 360 Query: 359 DFATSLDEANNPEWKTVAYDEATGEIVVPNGSVGFRWGEQGKWNLEERDSRS-RVTRLRL 417 D A +L + NNPEWKT+AYDE +G +V P G++G+RWGE GKWN+ E D RS TRL+L Sbjct: 361 DLADNLGQDNNPEWKTIAYDERSGGLVSPTGAIGYRWGESGKWNIAELDGRSGDQTRLQL 420 Query: 418 SLADTRDELADVAFPYFGNREHDHFKGTDHPDVLTRKVPAKRIQLNDGEVL-VASVYDLF 476 SL D + +VAFPYF +EH HFKG + +VL R+VP + I DG+ L VA+VYDL Sbjct: 421 SLLDGPEHACEVAFPYFAGQEHPHFKGVANDEVLLRRVPFREIVAADGKRLRVATVYDLQ 480 Query: 477 VANYGVDRGFGGEHLGNTYDDIQ-PYTPAWAERITGVPRDQIIAVAREFAANAEKTGGRS 535 +ANY +DRG GG+++ +Y+D PYTPAW ERITGVP + VAREFA +A+KT G++ Sbjct: 481 MANYSIDRGLGGDNVATSYEDADTPYTPAWQERITGVPAARATQVAREFADSADKTRGKA 540 Query: 536 LVILGAGLNHWYHMDMNYRGIINMLVMCGCIGQSGGGWSHYVGQEKLRPQSGWTPLAFGL 595 +VI+GA +NHWYHMDMNYR +INML+MCGCIGQSGGGW+HYVGQEKLRPQ+GW PLAFGL Sbjct: 541 MVIIGAAMNHWYHMDMNYRAVINMLMMCGCIGQSGGGWAHYVGQEKLRPQTGWAPLAFGL 600 Query: 596 DWGRPPRQMNSTSAFYAHTDQWRYETLDVKEILSPTAPQGPWDGALIDYNVRAERMGWLP 655 DW RPPRQMN TS FY H+ QWR+E L + E+LSP A + +DYN++AER+GWLP Sbjct: 601 DWSRPPRQMNGTSFFYLHSSQWRHEKLSMHEVLSPLADASRFAEHALDYNIQAERLGWLP 660 Query: 656 SAPQLETNPLEVSKLAAAAGLEPKDYVAKSLQSGVLKLSCEDPDGPKNWPRNMFVWRSNL 715 SAPQL NPL ++ A AAGL DYV + L+SG L+ + E PD P+N+PRNMF+WRSNL Sbjct: 661 SAPQLNRNPLRIAAEAEAAGLPVADYVVRELKSGGLRFASESPDDPQNFPRNMFIWRSNL 720 Query: 716 LGASGKGHEYFLKHLLGTKHGVLGKDLGEDGRKKPLEVKWREDAPEGKLDLLVTLDFRMS 775 LG+SGKGHEY LK+LLG K+GV+ DLG+ G +P EV W +D EGKLDL+ TLDFRMS Sbjct: 721 LGSSGKGHEYMLKYLLGAKNGVMNDDLGKAGGPRPTEVDWVDDGAEGKLDLVTTLDFRMS 780 Query: 776 TTCMYSDIVLPTATWYEKNDLNTSDMHPFIHPLSAAIDPVWESRSDWDIYKGIAEAFSKV 835 +TCMYSDIVLPTATWYEK+DLNTSDMHPFIHPLSAA DP WE++SDW+IYK IA+ FS V Sbjct: 781 STCMYSDIVLPTATWYEKDDLNTSDMHPFIHPLSAATDPAWEAKSDWEIYKAIAKKFSAV 840 Query: 836 APEVLGVEKDVVLTPIMHDSPGEIAQPF--DVKDWKTGAIDPIPGKTMPAVTVVERDYPN 893 A LGVE+D+V P++HD+P E+AQPF D DWK G +P+PG+ +P + +VERDYPN Sbjct: 841 AEGHLGVEQDLVTVPLLHDTPTELAQPFGGDGHDWKKGECEPVPGRNLPTLHLVERDYPN 900 Query: 894 LHKRFTSLGPLMNKLGNGGKGMSWNTDHEVELLKKLNGVVTEEGASQGLARIDSAIDACE 953 ++++FTSLGPL++KLGNGGKG+ WNT+ EV+L+ LN V E G SQG RIDSAIDA E Sbjct: 901 VYRKFTSLGPLLDKLGNGGKGIGWNTEKEVKLVGDLNHRVVESGVSQGRPRIDSAIDAAE 960 Query: 954 VILSLAPETNGEVAVKAWSSLGNFTGRDHTHLAVPKEDEKIRYRDVVAQPRKIISSPIWS 1013 V+L+LAPETNG+VAVKAW +L TGR+H HLA+PKEDEKIR+RD+ QPRKIISSP WS Sbjct: 961 VVLALAPETNGQVAVKAWEALSKITGREHAHLALPKEDEKIRFRDIQVQPRKIISSPTWS 1020 Query: 1014 GLESEKVCYNAGYTNVHELIPWRTLTGRQQLYQDHLWMRAFGEGFCVYRPPIDTKTVKPV 1073 GLE E V YNAGYTNVHELIPWRT+TGRQQ YQDH WM+AFGEGF YRPP++T+T + + Sbjct: 1021 GLEDEHVSYNAGYTNVHELIPWRTITGRQQFYQDHPWMQAFGEGFVSYRPPVNTRTTEKL 1080 Query: 1074 IDRKPNGNGSVVLNFITPHQKWGIHSTYTDNLLMLTLSRGGPIVWISELDAKAAGIADND 1133 ++RKPNGN + LN+ITPHQKWGIHSTY+DNLLMLTLSRGGPI+W+SE DA AGI DND Sbjct: 1081 LNRKPNGNPEITLNWITPHQKWGIHSTYSDNLLMLTLSRGGPIIWLSEHDAAKAGIVDND 1140 Query: 1134 WIEAYNSNGALVARAVVSQRVRQGMCMMYHAQEKIVNVPGSEQTGQRGGIHNSVTRTVLK 1193 W+E +N+NGA RAVVSQRV+ GM MMYHAQE+IVNVPGSE TG RGG HNSVTR VLK Sbjct: 1141 WVEVFNANGAATCRAVVSQRVKDGMVMMYHAQERIVNVPGSETTGTRGGHHNSVTRVVLK 1200 Query: 1194 PTHMIGGYVQQAYGFNYYGTVGANRDEFVIVRKMSKVDWLDTP 1236 PTHMIGGY QQA+GFNYYGTVG NRDEFV+VRKMSKVDWLD P Sbjct: 1201 PTHMIGGYAQQAWGFNYYGTVGCNRDEFVVVRKMSKVDWLDEP 1243 >narG [C] COG5013 Nitrate reductase alpha subunit Eco Escherichia coli K12 Length = 1247 Score = 1843 bits (4773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 847/1243 (68%), Positives = 1014/1243 (81%), Gaps = 5/1243 (0%) Query: 1 MSHFLDRLTFFTRAKPDFADGHGVTTTEDRSWKDGHRKRWQHDKIVRSTHGVNCTGSCSW 60 MS FLDR +F + FADGHG +R W+DG+R+RWQHDKIVRSTHGVNCTGSCSW Sbjct: 1 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKGGIVTWETQQTDYPRTRPDLPNHEPRGCARGASYSWYLYSGNRVKYPLVRSRLLK 120 K+YVK G+VTWETQQTDYPRTRPDLPNHEPRGC RGASYSWYLYS NR+KYP++R RL+K Sbjct: 61 KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120 Query: 121 LWREARAVMT-PVAAWKSIVEDPTKRAAYVQKRGLGGFVRASWAEVNEIVASANAYTAKT 179 +WREA+A+ + PV AW SI+ED K ++ Q RG GGFVR+SW EVNE++A++N YT K Sbjct: 121 MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180 Query: 180 YGPDRVFGFSPIPAMSMVSYAAGARYLSLLGGVCMSFYDWYCDLPPASPQTWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYA+GARYLSL+GG C+SFYDWYCDLPPASPQTWGEQTDVPE Sbjct: 181 YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240 Query: 240 SADWYNAGFLILWGSNVPQTRTPDAHFYTEVRYKGAKSVVICPDYSEASKFADLWVSPKQ 299 SADWYN+ ++I WGSNVPQTRTPDAHF+TEVRYKG K+V + PDY+E +K DLW++PKQ Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300 Query: 300 GTDAALAMAMGHVILKEFHVDRQARYFNDYARQYTDMPFLVRLVKSEGRLVPERFVRASD 359 GTDAA+A+AMGHV+L+EFH+D ++YF DY R+YTDMP LV L + +G R +RA+D Sbjct: 301 GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360 Query: 360 FATSLDEANNPEWKTVAYDEATGEIVVPNGSVGFRWGEQGKWNLEERDSRS-RVTRLRLS 418 +L + NNPEWKTVA++ GE+V PNGS+GFRWGE+GKWNLE+RD ++ T L+LS Sbjct: 361 LVDALGQENNPEWKTVAFN-TNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLS 419 Query: 419 LADTRDELADVAFPYFGNREHDHFKGTDHPDVLTRKVPAKRIQLNDGEV-LVASVYDLFV 477 L ++DE+A+V FPYFG +HF + +VL K+P KR+QL DG LV +VYDL + Sbjct: 420 LLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTL 479 Query: 478 ANYGVDRGFGGEHLGNTYDDIQPYTPAWAERITGVPRDQIIAVAREFAANAEKTGGRSLV 537 ANYG++RG + +YDD++ YTPAWAE+ITGV R QII +AREFA NA+KT GRS++ Sbjct: 480 ANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMI 539 Query: 538 ILGAGLNHWYHMDMNYRGIINMLVMCGCIGQSGGGWSHYVGQEKLRPQSGWTPLAFGLDW 597 I+GAGLNHWYH+DMNYRG+INML+ CGC+GQSGGGW+HYVGQEKLRPQ+GW PLAF LDW Sbjct: 540 IVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDW 599 Query: 598 GRPPRQMNSTSAFYAHTDQWRYETLDVKEILSPTAPQGPWDGALIDYNVRAERMGWLPSA 657 RP R MNSTS FY H+ QWRYET+ +E+LSP A + + G LID+NVRAERMGWLPSA Sbjct: 600 QRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSA 659 Query: 658 PQLETNPLEVSKLAAAAGLEPKDYVAKSLQSGVLKLSCEDPDGPKNWPRNMFVWRSNLLG 717 PQL TNPL ++ A AG+ P DY KSL+ G ++ + E P+ KN PRN+F+WRSNLLG Sbjct: 660 PQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLG 719 Query: 718 ASGKGHEYFLKHLLGTKHGVLGKDLGEDGRKKPLEVKWREDAPEGKLDLLVTLDFRMSTT 777 +SGKGHE+ LK+LLGT+HG+ GKDLG+ G KP EV W+++ EGKLDL+VTLDFR+S+T Sbjct: 720 SSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSST 779 Query: 778 CMYSDIVLPTATWYEKNDLNTSDMHPFIHPLSAAIDPVWESRSDWDIYKGIAEAFSKVAP 837 C+YSDI+LPTATWYEK+D+NTSDMHPFIHPLSAA+DP WE++SDW+IYK IA+ FS+V Sbjct: 780 CLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCV 839 Query: 838 EVLGVEKDVVLTPIMHDSPGEIAQPFDVKDWKTGAIDPIPGKTMPAVTVVERDYPNLHKR 897 LG E D+V PI HDS E+AQP DVKDWK G D IPGKT P + VVERDYP ++R Sbjct: 840 GHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYER 899 Query: 898 FTSLGPLMNKLGNGGKGMSWNTDHEVELLKKLNGVVTEEGASQGLARIDSAIDACEVILS 957 FTS+GPLM K+GNGGKG++WNT E++LL+KLN EG ++G +++AIDA E+IL+ Sbjct: 900 FTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLN-YTKAEGPAKGQPMLNTAIDAAEMILT 958 Query: 958 LAPETNGEVAVKAWSSLGNFTGRDHTHLAVPKEDEKIRYRDVVAQPRKIISSPIWSGLES 1017 LAPETNG+VAVKAW++L FTGRDHTHLA+ KEDEKIR+RD+ AQPRKIISSP WSGLE Sbjct: 959 LAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLED 1018 Query: 1018 EKVCYNAGYTNVHELIPWRTLTGRQQLYQDHLWMRAFGEGFCVYRPPIDTKTVKPVIDRK 1077 E V YNAGYTNVHELIPWRTL+GRQQLYQDH WMR FGE VYRPPIDT++VK VI +K Sbjct: 1019 EHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQK 1078 Query: 1078 PNGNGSVVLNFITPHQKWGIHSTYTDNLLMLTLSRGGPIVWISELDAKAAGIADNDWIEA 1137 NGN LNF+TPHQKWGIHSTY+DNLLMLTL RGGP+VW+SE DAK GIADNDWIE Sbjct: 1079 SNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEV 1138 Query: 1138 YNSNGALVARAVVSQRVRQGMCMMYHAQEKIVNVPGSEQTGQRGGIHNSVTRTVLKPTHM 1197 +NSNGAL ARAVVSQRV GM MMYHAQE+IVN+PGSE T QRGGIHNSVTR KPTHM Sbjct: 1139 FNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHM 1198 Query: 1198 IGGYVQQAYGFNYYGTVGANRDEFVIVRKMSKVDWLDTPAADQ 1240 IGGY AYGFNYYGTVG+NRDEFV+VRKM +DWLD DQ Sbjct: 1199 IGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQ 1241 >STM1764 [C] COG5013 Nitrate reductase alpha subunit Sty Salmonella typhimurium LT2 Length = 1247 Score = 1842 bits (4772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 854/1243 (68%), Positives = 1013/1243 (81%), Gaps = 5/1243 (0%) Query: 1 MSHFLDRLTFFTRAKPDFADGHGVTTTEDRSWKDGHRKRWQHDKIVRSTHGVNCTGSCSW 60 MS FLDR +F + FADGHG +R W+DG+R+RWQHDKIVRSTHGVNCTGSCSW Sbjct: 1 MSKFLDRFRYFKQKGETFADGHGQLLETNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKGGIVTWETQQTDYPRTRPDLPNHEPRGCARGASYSWYLYSGNRVKYPLVRSRLLK 120 K+YVK G+VTWETQQTDYPRTRPD+PNHEPRGC RGASYSWYLYS NR+KYPL+R RL+K Sbjct: 61 KIYVKNGLVTWETQQTDYPRTRPDMPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMK 120 Query: 121 LWREARAV-MTPVAAWKSIVEDPTKRAAYVQKRGLGGFVRASWAEVNEIVASANAYTAKT 179 +WREA+ + PV AW SI+ED K ++ Q RG GGFVR+SW EVNE++A++N YT KT Sbjct: 121 MWREAKKLHRDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKT 180 Query: 180 YGPDRVFGFSPIPAMSMVSYAAGARYLSLLGGVCMSFYDWYCDLPPASPQTWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYA+GARYLSL+GG C+SFYDWYCDLPPASPQTWGEQTDVPE Sbjct: 181 YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240 Query: 240 SADWYNAGFLILWGSNVPQTRTPDAHFYTEVRYKGAKSVVICPDYSEASKFADLWVSPKQ 299 SADWYN+ ++I WGSNVPQTRTPDAHF+TEVRYKG K+V + PDY+E +K DLW++PKQ Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300 Query: 300 GTDAALAMAMGHVILKEFHVDRQARYFNDYARQYTDMPFLVRLVKSEGRLVPERFVRASD 359 GTDAA+A+AMGHV+L+EFH+D +YF DY R+YTDMP LV L + +G R +RA+D Sbjct: 301 GTDAAMALAMGHVMLREFHLDNPRQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360 Query: 360 FATSLDEANNPEWKTVAYDEATGEIVVPNGSVGFRWGEQGKWNLEERDSRSRV-TRLRLS 418 SL + NNPEWKTVA + + GE+V PNGS+GFRWGE+GKWNLE+RD + T L+LS Sbjct: 361 LVDSLGQENNPEWKTVAIN-SNGEMVAPNGSIGFRWGEKGKWNLEQRDGTTGAETELQLS 419 Query: 419 LADTRDELADVAFPYFGNREHDHFKGTDHPDVLTRKVPAKRIQLNDGE-VLVASVYDLFV 477 L ++DE+ADV FPYFG ++F +VL K+PAKR+QL DG LV +VYDL + Sbjct: 420 LLGSQDEIADVGFPYFGGEGSEYFNHVALDNVLLHKLPAKRLQLADGSSALVTTVYDLTM 479 Query: 478 ANYGVDRGFGGEHLGNTYDDIQPYTPAWAERITGVPRDQIIAVAREFAANAEKTGGRSLV 537 ANYG++RG E+ +YDD + YTPAWAE+ITGVPR QII +AREFA NA+KT GRS++ Sbjct: 480 ANYGLERGLNDENCAASYDDTKAYTPAWAEQITGVPRAQIIRIAREFADNADKTHGRSMI 539 Query: 538 ILGAGLNHWYHMDMNYRGIINMLVMCGCIGQSGGGWSHYVGQEKLRPQSGWTPLAFGLDW 597 I+GAGLNHWYH+DMNYRG+INMLV CGC+GQSGGGW+HYVGQEKLRPQ+GW PLAF LDW Sbjct: 540 IVGAGLNHWYHLDMNYRGLINMLVFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDW 599 Query: 598 GRPPRQMNSTSAFYAHTDQWRYETLDVKEILSPTAPQGPWDGALIDYNVRAERMGWLPSA 657 RP R MNSTS FY H+ QWRYET+ +E+LSP A + + G LID+NVRAERMGWLPSA Sbjct: 600 QRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYSGHLIDFNVRAERMGWLPSA 659 Query: 658 PQLETNPLEVSKLAAAAGLEPKDYVAKSLQSGVLKLSCEDPDGPKNWPRNMFVWRSNLLG 717 PQL TNPL +++ A AG+ P DY KSL+ G ++ + E P+ KN PRN+F+WRSNLLG Sbjct: 660 PQLGTNPLYIAREAEKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLG 719 Query: 718 ASGKGHEYFLKHLLGTKHGVLGKDLGEDGRKKPLEVKWREDAPEGKLDLLVTLDFRMSTT 777 +SGKGHEY LK+LLGT+HG+ G DLG+ G KP EV+WR++ +GKLDL+VTLDFR+S+T Sbjct: 720 SSGKGHEYMLKYLLGTEHGIQGLDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSST 779 Query: 778 CMYSDIVLPTATWYEKNDLNTSDMHPFIHPLSAAIDPVWESRSDWDIYKGIAEAFSKVAP 837 C+YSDIVLPTATWYEK+D+NTSDMHPFIHPLSAA+DP WES+SDW+IYKGIA+ FS+V Sbjct: 780 CLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCV 839 Query: 838 EVLGVEKDVVLTPIMHDSPGEIAQPFDVKDWKTGAIDPIPGKTMPAVTVVERDYPNLHKR 897 LG E DVV PI HDS E+AQP DVKDWK G D IPGKT P + VERDYP ++R Sbjct: 840 GHLGKETDVVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMTVERDYPATYER 899 Query: 898 FTSLGPLMNKLGNGGKGMSWNTDHEVELLKKLNGVVTEEGASQGLARIDSAIDACEVILS 957 FTS+GPLM K+GNGGKG++WNT E++LL+KLN +G ++G +++AIDA E+IL+ Sbjct: 900 FTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLN-YTKADGPAKGQPMLNTAIDAAEMILT 958 Query: 958 LAPETNGEVAVKAWSSLGNFTGRDHTHLAVPKEDEKIRYRDVVAQPRKIISSPIWSGLES 1017 LAPETNG+VAVKAW++L FTGRDHTHLA KE+EKIR+RD+ AQPRKIISSP WSGLE Sbjct: 959 LAPETNGQVAVKAWAALSEFTGRDHTHLATNKEEEKIRFRDIQAQPRKIISSPTWSGLED 1018 Query: 1018 EKVCYNAGYTNVHELIPWRTLTGRQQLYQDHLWMRAFGEGFCVYRPPIDTKTVKPVIDRK 1077 E V YNAGYTNVHELIPWRTL+GRQQLYQDH WMR FGE VYRPPIDT++VK V+ RK Sbjct: 1019 EHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGRK 1078 Query: 1078 PNGNGSVVLNFITPHQKWGIHSTYTDNLLMLTLSRGGPIVWISELDAKAAGIADNDWIEA 1137 NGN LNF+TPHQKWGIHSTY+DNLLMLTLSRGGPIVW+SE DAK GI DNDWIE Sbjct: 1079 SNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSETDAKDLGIEDNDWIEV 1138 Query: 1138 YNSNGALVARAVVSQRVRQGMCMMYHAQEKIVNVPGSEQTGQRGGIHNSVTRTVLKPTHM 1197 +NSNGAL ARAVVSQRV GM MMYHAQE+IVN+PGSE T QRGGIHNSVTR KPTHM Sbjct: 1139 FNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHM 1198 Query: 1198 IGGYVQQAYGFNYYGTVGANRDEFVIVRKMSKVDWLDTPAADQ 1240 IGGY Q AYGFNYYGTVG+NRDEFV+VRKM ++WLD DQ Sbjct: 1199 IGGYAQLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQ 1241 >ZnarG [C] COG5013 Nitrate reductase alpha subunit EcZ Escherichia coli O157:H7 EDL933 Length = 1247 Score = 1841 bits (4768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 847/1243 (68%), Positives = 1014/1243 (81%), Gaps = 5/1243 (0%) Query: 1 MSHFLDRLTFFTRAKPDFADGHGVTTTEDRSWKDGHRKRWQHDKIVRSTHGVNCTGSCSW 60 MS FLDR +F + FADGHG +R W+DG+R+RWQHDKIVRSTHGVNCTGSCSW Sbjct: 1 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKGGIVTWETQQTDYPRTRPDLPNHEPRGCARGASYSWYLYSGNRVKYPLVRSRLLK 120 K+YVK G+VTWETQQTDYPRTRPDLPNHEPRGC RGASYSWYLYS NR+KYP++R RL+K Sbjct: 61 KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120 Query: 121 LWREARAVMT-PVAAWKSIVEDPTKRAAYVQKRGLGGFVRASWAEVNEIVASANAYTAKT 179 +WREA+A+ + PV AW SI+ED K ++ Q RG GGFVR+SW EVNE++A++N YT K Sbjct: 121 MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180 Query: 180 YGPDRVFGFSPIPAMSMVSYAAGARYLSLLGGVCMSFYDWYCDLPPASPQTWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYA+GARYLSL+GG C+SFYDWYCDLPPASPQTWGEQTDVPE Sbjct: 181 YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240 Query: 240 SADWYNAGFLILWGSNVPQTRTPDAHFYTEVRYKGAKSVVICPDYSEASKFADLWVSPKQ 299 SADWYN+ ++I WGSNVPQTRTPDAHF+TEVRYKG K+V + PDY+E +K DLW++PKQ Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300 Query: 300 GTDAALAMAMGHVILKEFHVDRQARYFNDYARQYTDMPFLVRLVKSEGRLVPERFVRASD 359 GTDAA+A+AMGHV+L+EFH+D ++YF DY R+YTDMP LV L + +G R +RA+D Sbjct: 301 GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360 Query: 360 FATSLDEANNPEWKTVAYDEATGEIVVPNGSVGFRWGEQGKWNLEERDSRS-RVTRLRLS 418 +L + NNPEWKTVA++ GE+V PNGS+GFRWGE+GKWNLE+RD ++ T L+LS Sbjct: 361 LVDALGQENNPEWKTVAFN-TNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLS 419 Query: 419 LADTRDELADVAFPYFGNREHDHFKGTDHPDVLTRKVPAKRIQLNDGEV-LVASVYDLFV 477 L ++DE+A+V FPYFG +HF + +VL K+P KR+QL DG LV +VYDL + Sbjct: 420 LLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTL 479 Query: 478 ANYGVDRGFGGEHLGNTYDDIQPYTPAWAERITGVPRDQIIAVAREFAANAEKTGGRSLV 537 ANYG++RG + +YDD++ YTPAWAE+ITGV R QII +AREFA NA+KT GRS++ Sbjct: 480 ANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMI 539 Query: 538 ILGAGLNHWYHMDMNYRGIINMLVMCGCIGQSGGGWSHYVGQEKLRPQSGWTPLAFGLDW 597 I+GAGLNHWYH+DMNYRG+INML+ CGC+GQSGGGW+HYVGQEKLRPQ+GW PLAF LDW Sbjct: 540 IVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDW 599 Query: 598 GRPPRQMNSTSAFYAHTDQWRYETLDVKEILSPTAPQGPWDGALIDYNVRAERMGWLPSA 657 RP R MNSTS FY H+ QWRYET+ +E+LSP A + + G LID+NVRAERMGWLPSA Sbjct: 600 QRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSA 659 Query: 658 PQLETNPLEVSKLAAAAGLEPKDYVAKSLQSGVLKLSCEDPDGPKNWPRNMFVWRSNLLG 717 PQL TNPL ++ A AG+ P DY KSL+ G ++ + E P+ KN PRN+F+WRSNLLG Sbjct: 660 PQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLG 719 Query: 718 ASGKGHEYFLKHLLGTKHGVLGKDLGEDGRKKPLEVKWREDAPEGKLDLLVTLDFRMSTT 777 +SGKGHE+ LK+LLGT+HG+ GKDLG+ G KP EV W+++ EGKLDL+VTLDFR+S+T Sbjct: 720 SSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSST 779 Query: 778 CMYSDIVLPTATWYEKNDLNTSDMHPFIHPLSAAIDPVWESRSDWDIYKGIAEAFSKVAP 837 C+YSDI+LPTATWYEK+D+NTSDMHPFIHPLSAA+DP WE++SDW+IYK IA+ FS+V Sbjct: 780 CLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCV 839 Query: 838 EVLGVEKDVVLTPIMHDSPGEIAQPFDVKDWKTGAIDPIPGKTMPAVTVVERDYPNLHKR 897 LG E D+V PI HDS E+AQP DVKDWK G D IPGKT P + VVERDYP ++R Sbjct: 840 GHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYER 899 Query: 898 FTSLGPLMNKLGNGGKGMSWNTDHEVELLKKLNGVVTEEGASQGLARIDSAIDACEVILS 957 FTS+GPLM K+GNGGKG++WNT E++LL+KLN EG ++G +++AIDA E+IL+ Sbjct: 900 FTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLN-YTKAEGPAKGQPMLNTAIDAAEMILT 958 Query: 958 LAPETNGEVAVKAWSSLGNFTGRDHTHLAVPKEDEKIRYRDVVAQPRKIISSPIWSGLES 1017 LAPETNG+VAVKAW++L FTGRDHTHLA+ KEDEKIR+RD+ AQPRKIISSP WSGLE Sbjct: 959 LAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLED 1018 Query: 1018 EKVCYNAGYTNVHELIPWRTLTGRQQLYQDHLWMRAFGEGFCVYRPPIDTKTVKPVIDRK 1077 E V YNAGYTNVHELIPWRTL+GRQQLYQDH WMR FGE VYRPPIDT++VK VI +K Sbjct: 1019 EHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQK 1078 Query: 1078 PNGNGSVVLNFITPHQKWGIHSTYTDNLLMLTLSRGGPIVWISELDAKAAGIADNDWIEA 1137 NGN LNF+TPHQKWGIHSTY+DNLLMLTL RGGP+VW+SE DAK GIADNDWIE Sbjct: 1079 SNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEV 1138 Query: 1138 YNSNGALVARAVVSQRVRQGMCMMYHAQEKIVNVPGSEQTGQRGGIHNSVTRTVLKPTHM 1197 +NSNGAL ARAVVSQRV GM MMYHAQE+IVN+PGSE T QRGGIHNSVTR KPTHM Sbjct: 1139 FNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHM 1198 Query: 1198 IGGYVQQAYGFNYYGTVGANRDEFVIVRKMSKVDWLDTPAADQ 1240 IGGY AYGFNYYGTVG+NRDEFV+VRKM +DWLD DQ Sbjct: 1199 IGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQ 1241 >ECs1729 [C] COG5013 Nitrate reductase alpha subunit Ecs Escherichia coli O157:H7 Length = 1247 Score = 1841 bits (4768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 847/1243 (68%), Positives = 1014/1243 (81%), Gaps = 5/1243 (0%) Query: 1 MSHFLDRLTFFTRAKPDFADGHGVTTTEDRSWKDGHRKRWQHDKIVRSTHGVNCTGSCSW 60 MS FLDR +F + FADGHG +R W+DG+R+RWQHDKIVRSTHGVNCTGSCSW Sbjct: 1 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60 Query: 61 KVYVKGGIVTWETQQTDYPRTRPDLPNHEPRGCARGASYSWYLYSGNRVKYPLVRSRLLK 120 K+YVK G+VTWETQQTDYPRTRPDLPNHEPRGC RGASYSWYLYS NR+KYP++R RL+K Sbjct: 61 KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120 Query: 121 LWREARAVMT-PVAAWKSIVEDPTKRAAYVQKRGLGGFVRASWAEVNEIVASANAYTAKT 179 +WREA+A+ + PV AW SI+ED K ++ Q RG GGFVR+SW EVNE++A++N YT K Sbjct: 121 MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180 Query: 180 YGPDRVFGFSPIPAMSMVSYAAGARYLSLLGGVCMSFYDWYCDLPPASPQTWGEQTDVPE 239 YGPDRV GFSPIPAMSMVSYA+GARYLSL+GG C+SFYDWYCDLPPASPQTWGEQTDVPE Sbjct: 181 YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240 Query: 240 SADWYNAGFLILWGSNVPQTRTPDAHFYTEVRYKGAKSVVICPDYSEASKFADLWVSPKQ 299 SADWYN+ ++I WGSNVPQTRTPDAHF+TEVRYKG K+V + PDY+E +K DLW++PKQ Sbjct: 241 SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300 Query: 300 GTDAALAMAMGHVILKEFHVDRQARYFNDYARQYTDMPFLVRLVKSEGRLVPERFVRASD 359 GTDAA+A+AMGHV+L+EFH+D ++YF DY R+YTDMP LV L + +G R +RA+D Sbjct: 301 GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360 Query: 360 FATSLDEANNPEWKTVAYDEATGEIVVPNGSVGFRWGEQGKWNLEERDSRS-RVTRLRLS 418 +L + NNPEWKTVA++ GE+V PNGS+GFRWGE+GKWNLE+RD ++ T L+LS Sbjct: 361 LVDALGQENNPEWKTVAFN-TNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLS 419 Query: 419 LADTRDELADVAFPYFGNREHDHFKGTDHPDVLTRKVPAKRIQLNDGEV-LVASVYDLFV 477 L ++DE+A+V FPYFG +HF + +VL K+P KR+QL DG LV +VYDL + Sbjct: 420 LLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTL 479 Query: 478 ANYGVDRGFGGEHLGNTYDDIQPYTPAWAERITGVPRDQIIAVAREFAANAEKTGGRSLV 537 ANYG++RG + +YDD++ YTPAWAE+ITGV R QII +AREFA NA+KT GRS++ Sbjct: 480 ANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMI 539 Query: 538 ILGAGLNHWYHMDMNYRGIINMLVMCGCIGQSGGGWSHYVGQEKLRPQSGWTPLAFGLDW 597 I+GAGLNHWYH+DMNYRG+INML+ CGC+GQSGGGW+HYVGQEKLRPQ+GW PLAF LDW Sbjct: 540 IVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDW 599 Query: 598 GRPPRQMNSTSAFYAHTDQWRYETLDVKEILSPTAPQGPWDGALIDYNVRAERMGWLPSA 657 RP R MNSTS FY H+ QWRYET+ +E+LSP A + + G LID+NVRAERMGWLPSA Sbjct: 600 QRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSA 659 Query: 658 PQLETNPLEVSKLAAAAGLEPKDYVAKSLQSGVLKLSCEDPDGPKNWPRNMFVWRSNLLG 717 PQL TNPL ++ A AG+ P DY KSL+ G ++ + E P+ KN PRN+F+WRSNLLG Sbjct: 660 PQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLG 719 Query: 718 ASGKGHEYFLKHLLGTKHGVLGKDLGEDGRKKPLEVKWREDAPEGKLDLLVTLDFRMSTT 777 +SGKGHE+ LK+LLGT+HG+ GKDLG+ G KP EV W+++ EGKLDL+VTLDFR+S+T Sbjct: 720 SSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSST 779 Query: 778 CMYSDIVLPTATWYEKNDLNTSDMHPFIHPLSAAIDPVWESRSDWDIYKGIAEAFSKVAP 837 C+YSDI+LPTATWYEK+D+NTSDMHPFIHPLSAA+DP WE++SDW+IYK IA+ FS+V Sbjct: 780 CLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCV 839 Query: 838 EVLGVEKDVVLTPIMHDSPGEIAQPFDVKDWKTGAIDPIPGKTMPAVTVVERDYPNLHKR 897 LG E D+V PI HDS E+AQP DVKDWK G D IPGKT P + VVERDYP ++R Sbjct: 840 GHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYER 899 Query: 898 FTSLGPLMNKLGNGGKGMSWNTDHEVELLKKLNGVVTEEGASQGLARIDSAIDACEVILS 957 FTS+GPLM K+GNGGKG++WNT E++LL+KLN EG ++G +++AIDA E+IL+ Sbjct: 900 FTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLN-YTKAEGPAKGQPMLNTAIDAAEMILT 958 Query: 958 LAPETNGEVAVKAWSSLGNFTGRDHTHLAVPKEDEKIRYRDVVAQPRKIISSPIWSGLES 1017 LAPETNG+VAVKAW++L FTGRDHTHLA+ KEDEKIR+RD+ AQPRKIISSP WSGLE Sbjct: 959 LAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLED 1018 Query: 1018 EKVCYNAGYTNVHELIPWRTLTGRQQLYQDHLWMRAFGEGFCVYRPPIDTKTVKPVIDRK 1077 E V YNAGYTNVHELIPWRTL+GRQQLYQDH WMR FGE VYRPPIDT++VK VI +K Sbjct: 1019 EHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQK 1078 Query: 1078 PNGNGSVVLNFITPHQKWGIHSTYTDNLLMLTLSRGGPIVWISELDAKAAGIADNDWIEA 1137 NGN LNF+TPHQKWGIHSTY+DNLLMLTL RGGP+VW+SE DAK GIADNDWIE Sbjct: 1079 SNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEV 1138 Query: 1138 YNSNGALVARAVVSQRVRQGMCMMYHAQEKIVNVPGSEQTGQRGGIHNSVTRTVLKPTHM 1197 +NSNGAL ARAVVSQRV GM MMYHAQE+IVN+PGSE T QRGGIHNSVTR KPTHM Sbjct: 1139 FNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHM 1198 Query: 1198 IGGYVQQAYGFNYYGTVGANRDEFVIVRKMSKVDWLDTPAADQ 1240 IGGY AYGFNYYGTVG+NRDEFV+VRKM +DWLD DQ Sbjct: 1199 IGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQ 1241