BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0051.0007.p         (130 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC2411_2 Non COG                                                      157   8e-39
RSc2249 [S] COG0599 Uncharacterized homolog of gamma-carboxymuco...   131   4e-31
PA0232 [S] COG0599 Uncharacterized homolog of gamma-carboxymucon...   126   2e-29
AGl653 [S] COG0599 Uncharacterized homolog of gamma-carboxymucon...   108   3e-24
Cgl2344 [S] COG0599 Uncharacterized homolog of gamma-carboxymuco...   108   4e-24

>CC2411_2 Non COG
          Length = 120

 Score =  157 bits (396), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 90/119 (75%)

Query: 8   DDGMTQRRKVLGNEWVDKSIKNRNAFNTDFQDLITRYAWGDIWTRPHFDHRTRRVLVIGT 67
           + G+  RR+VLG+ WVDKS+  R AF  D+Q +ITRYAW +IW RP  DHRTRR+LV+  
Sbjct: 2   EAGLVTRRRVLGDAWVDKSLAKRTAFTADYQAMITRYAWNEIWGRPGLDHRTRRLLVLAI 61

Query: 68  MVALGQWDEFRLHVRAALAEGGFTPDDIKEILLQQAIYCGVPAANHAVKEAGAIIAELG 126
             +L +W+EFRLHVRA L +GGFT D++KE+L+Q AIY GVPAAN A  EA  +++ELG
Sbjct: 62  CASLARWEEFRLHVRAGLEQGGFTQDELKEVLMQIAIYAGVPAANTAFTEAADVMSELG 120


>RSc2249 [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone
           decarboxylase subunit Rso Ralstonia solanacearum
          Length = 131

 Score =  131 bits (330), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 82/125 (65%), Gaps = 1/125 (0%)

Query: 1   MDDNQRRDDGMTQRRKVLGNEWVDKSIKNRNAFNTDFQDLITRYAWGDIWTRPHFDHRTR 60
           MD+  R   GM  RR VLG+  VD++   +      FQDLITRYAWG+IWTRP     TR
Sbjct: 1   MDERDRHHAGMQVRRAVLGDAHVDRATAAQTELTAPFQDLITRYAWGEIWTRPGLPRHTR 60

Query: 61  RVLVIGTMVALGQWDEFRLHVRAALAEGGFTPDDIKEILLQQAIYCGVPAANHAVKEAGA 120
            +L I  MVAL +  E RLH+RAA A  G T ++I+E+LLQ AIYCGVPAANHA   A A
Sbjct: 61  SLLTIAMMVALNRDGELRLHLRAA-ANNGVTREEIQEVLLQTAIYCGVPAANHAFHLAQA 119

Query: 121 IIAEL 125
           + A++
Sbjct: 120 VFADM 124


>PA0232 [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone
           decarboxylase subunit Pae Pseudomonas aeruginosa
          Length = 133

 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 85/127 (66%), Gaps = 1/127 (0%)

Query: 1   MDDNQRRDDGMTQRRKVLGNEWVDKSIKNRNAFNTDFQDLITRYAWGDIWTRPHFDHRTR 60
           MD+ QR + GM  RR VLG   V++S+ N   FN +FQ++ITR+AWGDIWTRP     TR
Sbjct: 1   MDEKQRYEAGMQVRRAVLGAAHVERSLANLTPFNEEFQEMITRHAWGDIWTRPGLPRHTR 60

Query: 61  RVLVIGTMVALGQWDEFRLHVRAALAEGGFTPDDIKEILLQQAIYCGVPAANHAVKEAGA 120
            ++ I  ++ + + +E +LH+RAA    G + D+IKE+++Q AIYCG+PAAN     A +
Sbjct: 61  SLVTIAMLIGMNRNEELKLHLRAA-KNNGVSRDEIKEVIMQSAIYCGIPAANATFHLAES 119

Query: 121 IIAELGL 127
           +  ELG+
Sbjct: 120 VWDELGV 126


>AGl653 [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone
           decarboxylase subunit Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 144

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 78/129 (60%), Gaps = 6/129 (4%)

Query: 1   MDDNQRRDDGMTQRRKVLGNEWVDKSIKNRNAFNTDFQDLITRYAWGDIWTRPHFDHRTR 60
           +D N+R + GM  RR VLG+  V+++    + F+  FQ LIT  AWG +W+  HF  R R
Sbjct: 5   IDKNERFEQGMKTRRAVLGDAHVNRAQTMTSDFDQPFQQLITEGAWGTVWSGNHFTKRER 64

Query: 61  RVLVIGTMVALGQWDEFRLHVRAALAEGGFTPDDIKEILLQQAIYCGVPAANHAVKEAGA 120
            ++ I  + ALGQ +E  +HVRA +  G  T  DI+E LL  AIY GVPAANHA K    
Sbjct: 65  SIVTIALLAALGQDEELAMHVRATVNTGA-TEADIREALLHVAIYAGVPAANHAFK---- 119

Query: 121 IIAELGLLK 129
            IA+L L+ 
Sbjct: 120 -IAKLALVS 127


>Cgl2344 [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone
           decarboxylase subunit Cgl Corynebacterium glutamicum
          Length = 122

 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 6   RRDDGMTQRRKVLGNEWVDKSIKNRNAFNTDFQDLITRYAWGDIWTRPHFDHRTRRVLVI 65
           R + GM  RR+VLG+  VD+++ N       FQD ITR AWGDIW RP  DH  RR+L I
Sbjct: 3   RYETGMKNRREVLGDAHVDRAVANTTEVTEKFQDFITRTAWGDIWERPGLDHTQRRLLTI 62

Query: 66  GTMVALGQWDEFRLHVRAALAEGGFTPDDIKEILLQQAIYCGVPAANHAVKEAGAIIAEL 125
             + A+G   E  +H+RAAL   G   + I E++L  A+Y GVP +NH  K     +++L
Sbjct: 63  AILTAVGNDGELDMHIRAAL-RAGVDQETIGEVILHTAVYAGVPNSNHGFKLLNNAVSDL 121