BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0050.0048.p         (106 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO0355 [P] COG2076 Membrane transporters of cations and cationi...   116   1e-26
STM4338 [P] COG2076 Membrane transporters of cations and cationi...   111   5e-25
sugE [P] COG2076 Membrane transporters of cations and cationic d...   108   3e-24
ZsugE [P] COG2076 Membrane transporters of cations and cationic ...   108   3e-24
ECs5129 [P] COG2076 Membrane transporters of cations and cationi...   108   3e-24

>YPO0355 [P] COG2076 Membrane transporters of cations and cationic drugs Ype
           Yersinia pestis
          Length = 104

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/104 (59%), Positives = 81/104 (77%)

Query: 1   MTWIILVSAGVLEIGFALSMKWSVGFTRLTPSLFAAAAGLSSVFLLSLALRALPVGTGYA 60
           M WIILV AG+LE+ +A+ +K+S GF+RLTPS+    A  +SVFLL+ A+++LP GT YA
Sbjct: 1   MAWIILVIAGLLEVIWAIGLKYSHGFSRLTPSIITLVAMAASVFLLAYAMKSLPAGTAYA 60

Query: 61  VWTGIGAAGTAIFGMALLGDSASPARVLCIVFIVGGVIGLKLVS 104
           VWTGIGA GTAI G+ LLG+SAS AR+L +  I+ G+IGLKL S
Sbjct: 61  VWTGIGAVGTAILGIVLLGESASLARILSLGLILAGIIGLKLAS 104


>STM4338 [P] COG2076 Membrane transporters of cations and cationic drugs Sty
           Salmonella typhimurium LT2
          Length = 105

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 80/102 (78%)

Query: 1   MTWIILVSAGVLEIGFALSMKWSVGFTRLTPSLFAAAAGLSSVFLLSLALRALPVGTGYA 60
           M+WIIL+ AG+LE+ +A+ +K++ GF+RLTPS+    A + S+ LLS A++ LPVGT YA
Sbjct: 1   MSWIILLIAGLLEVVWAVGLKYTHGFSRLTPSIITITAMVISMALLSWAMKTLPVGTAYA 60

Query: 61  VWTGIGAAGTAIFGMALLGDSASPARVLCIVFIVGGVIGLKL 102
           +WTGIGA G AI G+ LLG+SASPAR+L +  IV G+IGLKL
Sbjct: 61  IWTGIGAVGAAITGILLLGESASPARLLSLGLIVAGIIGLKL 102


>sugE [P] COG2076 Membrane transporters of cations and cationic drugs Eco
           Escherichia coli K12
          Length = 155

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 79/102 (77%)

Query: 1   MTWIILVSAGVLEIGFALSMKWSVGFTRLTPSLFAAAAGLSSVFLLSLALRALPVGTGYA 60
           M+WIILV AG+LE+ +A+ +K++ GF+RLTPS+    A + S+ LL+ A+++LPVGT YA
Sbjct: 51  MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMALLAWAMKSLPVGTAYA 110

Query: 61  VWTGIGAAGTAIFGMALLGDSASPARVLCIVFIVGGVIGLKL 102
           VWTGIGA G AI G+ LLG+SA+P R+  +  IV G+IGLKL
Sbjct: 111 VWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL 152


>ZsugE [P] COG2076 Membrane transporters of cations and cationic drugs EcZ
           Escherichia coli O157:H7 EDL933
          Length = 155

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 79/102 (77%)

Query: 1   MTWIILVSAGVLEIGFALSMKWSVGFTRLTPSLFAAAAGLSSVFLLSLALRALPVGTGYA 60
           M+WIILV AG+LE+ +A+ +K++ GF+RLTPS+    A + S+ LL+ A+++LPVGT YA
Sbjct: 51  MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMALLAWAMKSLPVGTAYA 110

Query: 61  VWTGIGAAGTAIFGMALLGDSASPARVLCIVFIVGGVIGLKL 102
           VWTGIGA G AI G+ LLG+SA+P R+  +  IV G+IGLKL
Sbjct: 111 VWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL 152


>ECs5129 [P] COG2076 Membrane transporters of cations and cationic drugs Ecs
           Escherichia coli O157:H7
          Length = 155

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 79/102 (77%)

Query: 1   MTWIILVSAGVLEIGFALSMKWSVGFTRLTPSLFAAAAGLSSVFLLSLALRALPVGTGYA 60
           M+WIILV AG+LE+ +A+ +K++ GF+RLTPS+    A + S+ LL+ A+++LPVGT YA
Sbjct: 51  MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMALLAWAMKSLPVGTAYA 110

Query: 61  VWTGIGAAGTAIFGMALLGDSASPARVLCIVFIVGGVIGLKL 102
           VWTGIGA G AI G+ LLG+SA+P R+  +  IV G+IGLKL
Sbjct: 111 VWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL 152