BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0049.0003.p (469 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr9703 [K] COG1475 Predicted transcriptional regulators Mlo Mes... 576 e-164 YPMT1.59c [K] COG1475 Predicted transcriptional regulators Ype Y... 160 5e-39 RSc2617 [K] COG1475 Predicted transcriptional regulators Rso Ral... 159 2e-38 PSLT068 [K] COG1475 Predicted transcriptional regulators Sty Sal... 110 9e-24 mlr6157 [K] COG1475 Predicted transcriptional regulators Mlo Mes... 81 5e-15 >mlr9703 [K] COG1475 Predicted transcriptional regulators Mlo Mesorhizobium loti Length = 747 Score = 576 bits (1485), Expect = e-164, Method: Compositional matrix adjust. Identities = 288/434 (66%), Positives = 352/434 (81%), Gaps = 7/434 (1%) Query: 1 MATAVRKITLSSSRDIPFNKLVLSQSNVRREKAGVSIEELAEDIARRTLLQSLNVRPVLD 60 M TAV+KITLSSSRDIPF+KLVL QSNVRR KAGVSI++LA IARR L+QSL+VRPV+D Sbjct: 44 MTTAVQKITLSSSRDIPFSKLVLGQSNVRRIKAGVSIQDLAASIARRGLIQSLHVRPVVD 103 Query: 61 AEGAETGMFEIPAGGRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQR 120 +G E GMFE+PAGGRRYRAL+LLVKQK+LAKTA VPCVV ++ +LA + SLAEN++R Sbjct: 104 TDGQEMGMFEVPAGGRRYRALELLVKQKQLAKTAPVPCVVGSSSSAILAREVSLAENVER 163 Query: 121 APLHPLDQFRAFHALREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSL 180 APLHPLDQ+RAF L ++G SEE+IAAAFF SVNVVKQRL+L +VSPALL+VYAEDGM++ Sbjct: 164 APLHPLDQYRAFKDLLDQGMSEEEIAAAFFISVNVVKQRLKLTTVSPALLDVYAEDGMTI 223 Query: 181 EQLMAFTVTADHGRQEQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAVFVGLDTYEAA 240 QL AF+V+ DH RQEQVW+AI +W KEPYQIRRMLTE TVRASD+RAVFVGL+ YEAA Sbjct: 224 AQLEAFSVSRDHTRQEQVWEAIKNNWSKEPYQIRRMLTENTVRASDKRAVFVGLERYEAA 283 Query: 241 GGMVLRDLFQSDDGGWLEDVALLDRLVTEKLKAEAETIAAEGWKWIEVAIDFPYGHTRGL 300 GG VLRDLFQSDDGGWL+DV LL+RLV +KL+ A+ IA EGWKWIEVA+ FPYG GL Sbjct: 284 GGEVLRDLFQSDDGGWLQDVPLLERLVKDKLQMMADEIANEGWKWIEVAVSFPYGAADGL 343 Query: 301 RELDGVSTGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDRP 360 REL+G L+ EE+ T+ AL+ E L+AE++ ADELPDEVDQR GE+E+A+ + RP Sbjct: 344 RELEGAPVDLSSEEKATLHALRDELRSLQAEYEEADELPDEVDQRFGELESAIKTLEARP 403 Query: 361 INYQLADIARAGVFVGIDAEGTLLVDRGYVRPEDELPVAEPEQNSDGEPAAAALDGAEPL 420 + + LA+IARAGVFV ID +G +L++RGYVRP+DE PV PE ++D DG++ Sbjct: 404 VRFDLAEIARAGVFVSIDTDGAILIERGYVRPQDEAPVT-PEGDND-----PGTDGSDVE 457 Query: 421 APA-IQRAVIIVGG 433 A +QRAVI +GG Sbjct: 458 ATGLVQRAVITIGG 471 >YPMT1.59c [K] COG1475 Predicted transcriptional regulators Ype Yersinia pestis Length = 669 Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 132/392 (33%), Positives = 202/392 (51%), Gaps = 34/392 (8%) Query: 16 IPFNKLVLSQSNVRREKAGV-SIEELAEDIARRTLLQSLNVRPVLDAEGAETGMFEIPAG 74 +P + L S NVR V S+ LA+ I LLQ+L V + D + + AG Sbjct: 39 VPLSSLAKSPLNVRTIPYSVDSVRGLADSIEALGLLQNLIVHTLADGQSG------VAAG 92 Query: 75 GRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQRAPLHPLDQFRAFHA 134 GRR AL LL ++ RLA +V +V+ + D+ A S+AEN QRA +HP +Q F Sbjct: 93 GRRLTALNLLAQEDRLAADHTV--MVKRVSDDIAALA-SVAENEQRAAMHPAEQIAGFRT 149 Query: 135 LREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSLEQLMAFTVTADHGR 194 L E+G++ I A V++ L+LA+++P+L+ A+D +++EQ A + D R Sbjct: 150 LAEQGKTPAQIGDALGFGSRHVQRMLKLANLAPSLMEKLAQDELTVEQCQALCLEDDPAR 209 Query: 195 QEQVWQAISGSWHKEP-YQIRRMLTEKTVRASDRRAVFVGLDTYEAAGGMVLRDLFQSDD 253 Q +V++ + SW P + I+R +TE +R + + F+G D YEAAGG V DLF D+ Sbjct: 210 QVEVFENVKASWSNAPAHLIKRAITETEMRTDNAKFRFIGRDAYEAAGGYVREDLFSQDE 269 Query: 254 GGWLEDVALLDRLVTEKLKAEAETIAA-EGWKWIEVAIDFPYGHTRGLREL------DGV 306 G D L++RLV EKL+ A+ I EGW W + H +E D V Sbjct: 270 GDGTADSVLVERLVQEKLERIAQDIQQREGWAWSRGRAARIWYHGEDGKEFVQPVEPDPV 329 Query: 307 STGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDRPINYQLA 366 TPE+Q ++AL+ ++ D D + DE D +I LA+ + + Sbjct: 330 ---YTPEQQQRLDALREQY-------DTYDSVCDESDAIEADI---LAIQEAAEASAWTD 376 Query: 367 DI-ARAGVFVGIDAEGTLLVDRGYVRPEDELP 397 D+ + AGV V + EG + V RG VR + ++P Sbjct: 377 DMKSGAGVMVSL-YEGQVYVQRG-VRLKADMP 406 >RSc2617 [K] COG1475 Predicted transcriptional regulators Rso Ralstonia solanacearum Length = 597 Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 104/217 (47%), Positives = 136/217 (62%), Gaps = 6/217 (2%) Query: 73 AGGRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQRAPLHPLDQFRAF 132 AGGRR AL+LL K++R++K VPC++ D A SL EN+QR +HP DQF AF Sbjct: 87 AGGRRLAALKLLAKKRRISKEWEVPCLL---VADGTARTASLTENVQREAMHPADQFEAF 143 Query: 133 HALREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSLEQLMAFTVTADH 192 AL +G+ EDIAA F S VV++RL+LA+VSP LL Y ++L+QLMA +T DH Sbjct: 144 AALVAEGRPIEDIAADFSVSPLVVQRRLKLANVSPRLLADYRAKAVTLDQLMALAITDDH 203 Query: 193 GRQEQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAV-FVGLDTYEAAGGMVLRDLFQS 251 QE + + +W + P Q+R LTE+ + A V FVGLDTY AAGG V RDLF Sbjct: 204 AAQETAFYD-APTWQRNPSQLRDRLTEREIDAYRHPLVRFVGLDTYGAAGGGVRRDLFAE 262 Query: 252 DDGG-WLEDVALLDRLVTEKLKAEAETIAAEGWKWIE 287 D G +L D ALL+RL +KL A + AEGW W++ Sbjct: 263 GDAGVYLTDAALLERLAQDKLAGIAAEVKAEGWAWVD 299 >PSLT068 [K] COG1475 Predicted transcriptional regulators Sty Salmonella typhimurium LT2 Length = 665 Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 116/397 (29%), Positives = 178/397 (44%), Gaps = 31/397 (7%) Query: 16 IPFNKLVLSQSNVRREKAGV-SIEELAEDIARRTLLQSLNVRPVLDAEGAETGMFEIPAG 74 +P + LV S NVR S+ ELA+ I LLQ+L V + D G++ + AG Sbjct: 41 VPLSALVKSPQNVRIVPYSTESVRELADSIKGIGLLQNLVVHALPD------GLYGVAAG 94 Query: 75 GRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQRAPLHPLDQFRAFHA 134 GRR A+ LL + + V V D LA SL EN Q +HP +Q F A Sbjct: 95 GRRLAAMNLLATENTIHPDWPVRVKV---VPDNLATAASLTENGQHLEMHPAEQIAGFRA 151 Query: 135 LREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSLEQLMAFTVTADHGR 194 + +G++ S V++ L+LA ++P +L A D ++ E A + + R Sbjct: 152 MAAEGKTPAQTGDLLGYSPRHVQRMLKLAGLAPVILEALAADKITTEHCQALALEDNPDR 211 Query: 195 QEQVWQAIS-GSWHKEPY--QIRRMLTEKTVRA-SDRRAVFVGLDTYEAAGGMVLRDLFQ 250 Q QV++A W+ +P IR ++T+ V ++ + FVG + +G + DLF Sbjct: 212 QVQVYEAACREGWNNKPEVRVIRNLITDSQVSTLNNSKYTFVGEKAF--SGDEIRADLFS 269 Query: 251 SDDGGWLEDVALLDRLVTEKLKAEAETIA-AEGWKWIEVAID--FPYGH-TRGLRELDGV 306 + GG+++ +A LD + EKL+ AE + AEGW W ++ YG T R D Sbjct: 270 DEQGGFVDKLA-LDTALLEKLQWVAECLKEAEGWAWCAGRMEPVSRYGEDTEVYRIQDEP 328 Query: 307 STGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDRPINYQLA 366 T +EQ ++ L+ + D DE D EIE R ++ Sbjct: 329 DAVYTEQEQQRLDELQELY-------DENQTASDETDTMESEIEAIECAAQLRAWTLEMR 381 Query: 367 DIARAGVFVGIDAEGTLLVDRGYVRPEDELPVAEPEQ 403 A++GV V G + V RG E EP+Q Sbjct: 382 --AQSGVVVSW-RHGEICVQRGVSLREQSETEDEPDQ 415 >mlr6157 [K] COG1475 Predicted transcriptional regulators Mlo Mesorhizobium loti Length = 593 Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 15/281 (5%) Query: 16 IPFNKLVLSQSNVRREKAGVSIEELAEDIARRTLLQSLNVRPVLDAEGAETGMFEIPAGG 75 IP +KL +S N+R K + ++ + R +L L VRP E FEI AG Sbjct: 23 IPLDKLNISALNMRHSKRAPDVSDILPSVRARGVLVPLLVRPNGTPES-----FEIVAGR 77 Query: 76 RRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQRAPLHPLDQFRAFHAL 135 RRY A + L ++ + ++PC + + D A + SL EN R + Q+ F L Sbjct: 78 RRYFAAKSLADER--GEGNALPCAIMEDGDDADALEASLIENFARLDPDEVSQWETFSRL 135 Query: 136 REKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSLEQLMAFTVTADHGRQ 195 ++G+S DIAA F + +VK+ L L + P + Y + + E T+ + Q Sbjct: 136 IKEGRSVGDIAATFGITELLVKRILALGDLLPKIREAYRREDIDAETARHLTMASKA--Q 193 Query: 196 EQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAVFVGLDTYEAAGGMVLRDLFQSDDGG 255 ++ W A+ E Y R ++ + + V L E G+++ DLF D Sbjct: 194 QKDWLALYAD--PEQYAPRGHQLKQWLFGGQSISTKVALFAIEDYPGLIVCDLFGED--S 249 Query: 256 WLEDVALLDRLVTEKLKAEAETIAAEGWKWIEVAIDFPYGH 296 + D L + E + A+ + GW EVA+ P H Sbjct: 250 YFADADLFWQKQNEAIAAKRDAYLEAGWP--EVAVLEPGQH 288