BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0048.0016.p         (164 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM1729 [S] COG3685 Uncharacterized protein conserved in bacteri...    99   4e-21
yciF [S] COG3685 Uncharacterized protein conserved in bacteria E...    96   3e-20
ZyciF [S] COG3685 Uncharacterized protein conserved in bacteria ...    96   3e-20
ECs1830 [S] COG3685 Uncharacterized protein conserved in bacteri...    96   3e-20
AGpA401 [S] COG3685 Uncharacterized protein conserved in bacteri...    93   3e-19

>STM1729 [S] COG3685 Uncharacterized protein conserved in bacteria Sty
           Salmonella typhimurium LT2
          Length = 167

 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 1/162 (0%)

Query: 1   MKITSFKDMYVAELQELASVEEQLAVALARMAEIASHPSLKDAFSRHHRETIVQGERLKS 60
           M I + +D+++  L +  S E+QL  AL ++A   S+  L  AF  H  ET  Q ER+  
Sbjct: 1   MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQ 60

Query: 61  LLRMHGADPLEHTDQ-AVQALIHETAKMVSLLPDDNLRDAGLVASAQKLAHYEIAAYGSA 119
           ++       L+     A++ LI E  +++     + +RDA L+A+AQK+ HYEIA+YG+ 
Sbjct: 61  IVESESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL 120

Query: 120 AALAGQLNLRDDQRLLHDSLDEERHVDTLLTALAKGEINQDA 161
           A LA QL      +LL ++LDEE+  D  LT LA   +N+ A
Sbjct: 121 ATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNKSA 162


>yciF [S] COG3685 Uncharacterized protein conserved in bacteria Eco
           Escherichia coli K12
          Length = 166

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 1/162 (0%)

Query: 1   MKITSFKDMYVAELQELASVEEQLAVALARMAEIASHPSLKDAFSRHHRETIVQGERLKS 60
           M + + +D+++  L +  S E+QL  ALA++A   S+  L  AF  H  ET  Q ER+  
Sbjct: 1   MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQ 60

Query: 61  LLRMHGADPLEHTDQ-AVQALIHETAKMVSLLPDDNLRDAGLVASAQKLAHYEIAAYGSA 119
           ++       ++     A++ LI E  +++     + +RDA L+A+AQK+ HYEIA+YG+ 
Sbjct: 61  VVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL 120

Query: 120 AALAGQLNLRDDQRLLHDSLDEERHVDTLLTALAKGEINQDA 161
           A LA QL  R   +LL ++L+EE+  D  LT LA   +N+ A
Sbjct: 121 ATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKKA 162


>ZyciF [S] COG3685 Uncharacterized protein conserved in bacteria EcZ
           Escherichia coli O157:H7 EDL933
          Length = 166

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 1/162 (0%)

Query: 1   MKITSFKDMYVAELQELASVEEQLAVALARMAEIASHPSLKDAFSRHHRETIVQGERLKS 60
           M + + +D+++  L +  S E+QL  ALA++A   S+  L  AF  H  ET  Q ER+  
Sbjct: 1   MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQ 60

Query: 61  LLRMHGADPLEHTDQ-AVQALIHETAKMVSLLPDDNLRDAGLVASAQKLAHYEIAAYGSA 119
           ++       ++     A++ LI E  +++     + +RDA L+A+AQK+ HYEIA+YG+ 
Sbjct: 61  VVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL 120

Query: 120 AALAGQLNLRDDQRLLHDSLDEERHVDTLLTALAKGEINQDA 161
           A LA QL  R   +LL ++L+EE+  D  LT LA   +N+ A
Sbjct: 121 ATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNKKA 162


>ECs1830 [S] COG3685 Uncharacterized protein conserved in bacteria Ecs
           Escherichia coli O157:H7
          Length = 166

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 1/162 (0%)

Query: 1   MKITSFKDMYVAELQELASVEEQLAVALARMAEIASHPSLKDAFSRHHRETIVQGERLKS 60
           M + + +D+++  L +  S E+QL  ALA++A   S+  L  AF  H  ET  Q ER+  
Sbjct: 1   MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQ 60

Query: 61  LLRMHGADPLEHTDQ-AVQALIHETAKMVSLLPDDNLRDAGLVASAQKLAHYEIAAYGSA 119
           ++       ++     A++ LI E  +++     + +RDA L+A+AQK+ HYEIA+YG+ 
Sbjct: 61  VVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL 120

Query: 120 AALAGQLNLRDDQRLLHDSLDEERHVDTLLTALAKGEINQDA 161
           A LA QL  R   +LL ++L+EE+  D  LT LA   +N+ A
Sbjct: 121 ATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNKKA 162


>AGpA401 [S] COG3685 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 187

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 85/154 (55%)

Query: 5   SFKDMYVAELQELASVEEQLAVALARMAEIASHPSLKDAFSRHHRETIVQGERLKSLLRM 64
           + KD+++  ++++   E Q+  AL +MA  A    LK AF +H  ET V  ERL+++   
Sbjct: 26  TLKDLFLDTVKDIYFAERQILKALPKMARAAQSADLKAAFEKHRDETEVHVERLQNVFEF 85

Query: 65  HGADPLEHTDQAVQALIHETAKMVSLLPDDNLRDAGLVASAQKLAHYEIAAYGSAAALAG 124
            G      T +A+Q +I E  +++      +  DAGL++SAQ + HYEI  YG+    A 
Sbjct: 86  LGKPARGRTCEAIQGIIAEGEEIMEEFKGSSALDAGLISSAQAVEHYEITRYGTLKTWAV 145

Query: 125 QLNLRDDQRLLHDSLDEERHVDTLLTALAKGEIN 158
           +L +++  +L   +L EE   DT L++LA+   N
Sbjct: 146 ELGMKEAAKLFEQTLGEESATDTALSSLAQARAN 179