BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0048.0004.p (269 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 252 7e-67 AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 250 3e-66 mll1253 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 243 4e-64 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 242 6e-64 MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 233 4e-61 >MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mja Methanococcus jannaschii Length = 267 Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 115/254 (45%), Positives = 172/254 (67%), Gaps = 5/254 (1%) Query: 1 MTTRARFDKVSLAFETPKGRLNVVEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKP 60 M + + + ++ FE R+ +++++ ++ + +F+ V+GPSGCGKTT++ ++AG P Sbjct: 13 MKVKLKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYP 72 Query: 61 TTGTVLFDGQPVAGPGPERGVIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDH 120 T G VL DG+ V GPG +RGV+FQ+Y + PW TV +N+ FGL L+ + ER I Sbjct: 73 TEGKVLLDGKEVKGPGADRGVVFQQYTLMPWRTVLKNVTFGLELKG--IPKNERIEIAKK 130 Query: 121 YLGLMGLSDFANSYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLL 180 ++ ++GL F ++YP LSGGM+QR+AIAR A P+ +LMDEPF ALDAQTR+ +QN L Sbjct: 131 FIKMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNEL 190 Query: 181 LKVLQTEGKTVMLITHSVEEAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEF 240 LK+ Q E KTV +THSV+EA+YL+ R+VV+TARP RI++I+ + PRD + EF Sbjct: 191 LKIWQKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIKEIVKIDLERPRDRT---SIEF 247 Query: 241 GELRSHIKHLVMDE 254 E R I +++ DE Sbjct: 248 LEYRKKILNILKDE 261 >AGc259 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 266 Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 116/238 (48%), Positives = 163/238 (68%), Gaps = 2/238 (0%) Query: 24 VEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPTTGTVLFDGQPVAGPGPERGVIF 83 ++ + +I DF+ ++GPSGCGK+T++ ++AG +PTTG VL G+ V GPG +RG++F Sbjct: 30 LQPTNLEIPRNDFVTILGPSGCGKSTLLRIIAGLDRPTTGEVLLSGKAVTGPGADRGMVF 89 Query: 84 QEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYLGLMGLSDFANSYPKHLSGGMR 143 Q Y +FPWLT+++N+AFGL R VA E+ I D Y+ +GL F N +PK LSGGM+ Sbjct: 90 QSYTLFPWLTIRENVAFGL--RERGVAEKEKWEIVDSYIDKVGLRGFENHWPKQLSGGMQ 147 Query: 144 QRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLKVLQTEGKTVMLITHSVEEAIY 203 QR AIARA A P+ LL+DEPFGALD QTR MQ LLL + + E KTV+ +TH +EEA++ Sbjct: 148 QRTAIARALANGPKILLLDEPFGALDNQTRGLMQELLLGIWEREQKTVIFVTHDIEEAVF 207 Query: 204 LASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGELRSHIKHLVMDEYRAQQAQ 261 +ASR+V ++ARP RI+ I V +PR +I+ PEF ELR+ + + E A A Sbjct: 208 MASRVVTMSARPGRIKSITPVDLPHPRHYTIKASPEFSELRAKLTEEIRSEAIAAAAH 265 >mll1253 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mlo Mesorhizobium loti Length = 267 Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 120/258 (46%), Positives = 170/258 (65%), Gaps = 5/258 (1%) Query: 7 FDKVSLAFETPKGRLNVVEDVSYD--INDGDFIAVIGPSGCGKTTMMSMLAGFQKPTTGT 64 + VS F +G L V + D + DFI ++GPSGCGK+T++ ++AG + P+ G Sbjct: 10 IEGVSRTFAGVRGGLPVKALMPIDLAVAANDFITILGPSGCGKSTLLRIVAGLEAPSEGR 69 Query: 65 VLFDGQPVAGPGPERGVIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYLGL 124 VL D + V PGP+RG++FQ Y +FPWLTV +NIAFGL R +A ERD I Y+ L Sbjct: 70 VLLDDKAVTRPGPDRGMVFQSYTLFPWLTVSENIAFGL--RERGMAPKERDDIVASYVDL 127 Query: 125 MGLSDFANSYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLKVL 184 +GL F N +PK LSGGM+QR AIARA A P+ LL+DEPFGALD QTR MQ LLL + Sbjct: 128 VGLKGFENHWPKQLSGGMQQRTAIARALANDPEILLLDEPFGALDNQTRGLMQELLLGIW 187 Query: 185 QTEGKTVMLITHSVEEAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGELR 244 + KTV+ +TH +EEAI++ASR++V+TARP I+ + + +PR +++ PEF L+ Sbjct: 188 ERRKKTVLFVTHDIEEAIFMASRVIVMTARPGSIKSDVAIDLPHPRHYTLKTSPEFSALK 247 Query: 245 SHI-KHLVMDEYRAQQAQ 261 + + + + ++ R QAQ Sbjct: 248 ARLTEDIRVEAMRTAQAQ 265 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 110/231 (47%), Positives = 161/231 (69%), Gaps = 5/231 (2%) Query: 24 VEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPTTGTVLFDGQPVAGPGPERGVIF 83 + ++S+D+ DG+FI ++GPSGCGKTT++ + AG + T+G + +G P+ GP P+RG++F Sbjct: 39 LHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLTSGEITLNGVPITGPDPKRGMVF 98 Query: 84 QEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYLGLMGLSDFANSYPKHLSGGMR 143 Q+Y +FPW TV NI FGL ++ + E + YL L+GL F NSYP LSGGM+ Sbjct: 99 QQYSLFPWRTVIDNITFGLEMQG--IKKSEARKQVEKYLELVGLGQFKNSYPHELSGGMQ 156 Query: 144 QRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLKVLQTEGKTVMLITHSVEEAIY 203 QR AIARA A +P+ LLMDEPFGALDAQTR+ +Q+ LLK+ + + T + +THSV+EA++ Sbjct: 157 QRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELLKIWEQKHVTFLFVTHSVDEAVF 216 Query: 204 LASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGELRSHIKHLVMDE 254 L+ RIVV+T+RP R+++I+ V PR + PE LR H+ L+ +E Sbjct: 217 LSDRIVVMTSRPGRVKEIVSVELPRPRSRT---SPEVNRLRDHVLKLLEEE 264 >MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mka Methanopyrus kandleri AV19 Length = 246 Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 107/232 (46%), Positives = 163/232 (70%), Gaps = 6/232 (2%) Query: 21 LNVVEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPTTGTVLFDGQPVAGPGPERG 80 L V++ +++++++G+F A++GPSGCGKTT++ ++AG + G VL DG+ V PGP+R Sbjct: 17 LKVLDGITFEVSEGEFFAIVGPSGCGKTTLLKIIAGLEDYDAGRVLVDGEEVREPGPDRA 76 Query: 81 VIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYLGLM-GLSDFANSYPKHLS 139 ++FQEY +FPW TV +N+ F ++ ER I L ++ GL F ++YPK LS Sbjct: 77 LVFQEYAIFPWKTVLENVMFAPLMQGKDPEEAER--IARECLKVVPGLEGFEDAYPKQLS 134 Query: 140 GGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLKVLQTEGKTVMLITHSVE 199 GGM+QR+AIARA A +P+ LLMDEPF A+DAQTR+ MQ LLK+ + G+T++L+TH+VE Sbjct: 135 GGMKQRVAIARALAAEPRILLMDEPFAAVDAQTRNKMQEELLKIWERTGQTILLVTHNVE 194 Query: 200 EAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGELRSHIKHLV 251 EA++LA R++V++ RPA I I+++ PRD + PEF ELR+ I ++ Sbjct: 195 EAVFLADRVMVLSPRPAEIVDIVEIDLPRPRDRT---DPEFVELRARILDMI 243