BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0046.0018.p         (108 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr0745 [K] COG0640 Predicted transcriptional regulators Mlo Mes...   111   4e-25
mll2255 [K] COG0640 Predicted transcriptional regulators Mlo Mes...   104   5e-23
SMb21008 [K] COG0640 Predicted transcriptional regulators Sme Si...   102   2e-22
SMc03843 [K] COG0640 Predicted transcriptional regulators Sme Si...   100   6e-22
mlr8182 [K] COG0640 Predicted transcriptional regulators Mlo Mes...    75   3e-14

>mlr0745 [K] COG0640 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 104

 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 1/100 (1%)

Query: 9   DVLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGLVAERREGR 68
           ++ + LADPTRRAVFER+A   E++ + L  G  VSQPAVSQHL  LR AGLV ERR GR
Sbjct: 5   EIFRALADPTRRAVFERLA-AAEMSVSELRSGLTVSQPAVSQHLAVLRGAGLVVERRAGR 63

Query: 69  HIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKESE 108
           + +YR  P+GL PL+ W+  Y TFW ER   L+ +LK+ +
Sbjct: 64  NAYYRADPQGLAPLLSWIERYRTFWPERIERLKTVLKDMD 103


>mll2255 [K] COG0640 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 107

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 61/96 (63%)

Query: 10  VLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGLVAERREGRH 69
           + +TLADPTRRA+FER+ R+GE     L   S VSQPAVS+HL  L+ AGLV +R EGR 
Sbjct: 8   LFRTLADPTRRAIFERLCRQGEQTVGALTSQSGVSQPAVSKHLGVLKQAGLVRDRHEGRQ 67

Query: 70  IHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLK 105
            HY      L PL+DW      FW  RF +LE LLK
Sbjct: 68  THYSAQLGALAPLMDWTREMAGFWEARFDDLEDLLK 103


>SMb21008 [K] COG0640 Predicted transcriptional regulators Sme Sinorhizobium
           meliloti
          Length = 110

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 4/108 (3%)

Query: 5   TQLTD----VLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGL 60
           +Q++D    + +TLADPTRRA+FER+ REGE     L   + VSQP VS+HL  L+ AGL
Sbjct: 2   SQMSDAHDMLFRTLADPTRRALFERLCREGERTVGALTARAGVSQPVVSKHLGILKQAGL 61

Query: 61  VAERREGRHIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKESE 108
           V +R EGRH +Y      L PL+DW      FW  RF +LE LLK  +
Sbjct: 62  VRDRHEGRHTYYSAQLGALAPLVDWTREMAGFWQSRFDDLEDLLKRMD 109


>SMc03843 [K] COG0640 Predicted transcriptional regulators Sme Sinorhizobium
           meliloti
          Length = 104

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 1/101 (0%)

Query: 8   TDVLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGLVAERREG 67
            D+ K LADPTRRA+FE++A  G + A+ L  G  +SQPA+SQHL  LR+A LV E R+G
Sbjct: 4   NDIFKALADPTRRAIFEKLA-SGSMNASALRNGMDISQPAMSQHLHVLRNAKLVREERQG 62

Query: 68  RHIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKESE 108
           R ++Y V P+GL  +  WL  Y  +W  R   L+ LL++ +
Sbjct: 63  RFVNYEVDPEGLALIAGWLAKYRAYWPARIDALKVLLRDMD 103


>mlr8182 [K] COG0640 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 106

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)

Query: 1   MPAATQLTDVLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGL 60
           M  A     V + +ADPTRRA+ +R+ R+G      L      S+PA+S+HLR LR+  +
Sbjct: 1   MSQADPDRSVFRAIADPTRRAILDRL-RQGPAPVNELASAFSQSRPAISKHLRVLRELRV 59

Query: 61  VAERREGRHIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKESE 108
           V+E++ GR   YR+ P  L  + DW+  Y  FW     NL+  L ESE
Sbjct: 60  VSEQKHGRERLYRLEPAELKDVADWILPYRDFWQASLGNLKTYL-ESE 106