BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0046.0004.p         (103 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0955 [NU] COG1677 Flagellar hook-basal body protein Ccr Caulob...    61   6e-10

>CC0955 [NU] COG1677 Flagellar hook-basal body protein Ccr Caulobacter
           vibrioides
          Length = 103

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 50/72 (69%)

Query: 32  GPSFSALLKDSVGSVLEAGKKSDAQTMAMASGKANVMDVVTAVADTDVAVSTLVSVRDRV 91
           G  F  LLK ++    +A K ++ +  A  +GKA ++DVVTA++  + ++ T++S+RD+V
Sbjct: 32  GVDFGDLLKSAMDGATKASKVAEHKIAAQVAGKAELVDVVTAISSAEASLETVMSIRDQV 91

Query: 92  IQAYEDIMKMPI 103
           I AY++IM+MPI
Sbjct: 92  ISAYQEIMRMPI 103