BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0045.0041.p         (182 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0578 [S] COG2128 Uncharacterized conserved protein Bme Bruc...   234   9e-62
Rv2429 [S] COG2128 Uncharacterized conserved protein Mtu Mycobac...   147   1e-35
MT2504 [S] COG2128 Uncharacterized conserved protein MtC Mycobac...   147   1e-35
CC3698 Non COG                                                        113   2e-25
RSc1645 [S] COG2128 Uncharacterized conserved protein Rso Ralsto...   102   6e-22

>BMEII0578 [S] COG2128 Uncharacterized conserved protein Bme Brucella
           melitensis
          Length = 175

 Score =  234 bits (596), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 109/171 (63%), Positives = 135/171 (78%)

Query: 3   SIEQLNETIPNFAKDVRLNLASLLADDTLSPQRQYGLLLASAIATRNAALITAIEAAATA 62
           SI+ L   IP+FAKDVRLNL+S+ +D+TL+PQ++YGL +A  IA+RNA +  A+ A A  
Sbjct: 2   SIDDLKSKIPDFAKDVRLNLSSMASDETLTPQQKYGLFVACGIASRNADVRKALVAEAAG 61

Query: 63  VMTPAAIAAAKSAASVMAMNNVYYRFVHLVSNPEYKTMPPRLRMNVIGNPGVDKSDFELW 122
            +  + I AAK+AAS+M MNNVYYRFVHL SN +Y+TMP RLRMNVI NPGVDK DFELW
Sbjct: 62  KVDASVIQAAKAAASIMGMNNVYYRFVHLASNKDYRTMPARLRMNVISNPGVDKVDFELW 121

Query: 123 SLAVSAINGCGACVDAHEKTLRAEGVSSGVIQTAVRFAAIVQSVAVAIEAA 173
           SLAVSAINGCG C+DAHE  LR   V++  IQ AVRFA+I+QS A+A+EAA
Sbjct: 122 SLAVSAINGCGMCIDAHEDVLRKANVTAEAIQAAVRFASIIQSAAIALEAA 172


>Rv2429 [S] COG2128 Uncharacterized conserved protein Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 177

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 113/177 (63%), Gaps = 4/177 (2%)

Query: 3   SIEQLNETIPNFAKDVRLNLASLLADDTLSPQRQYGLLLASAIATRNAALITAIEAAATA 62
           SIE+L   +P +AKD++LNL+S+     L  ++ +G LLASA ATRN  ++  I A AT 
Sbjct: 2   SIEKLKAALPEYAKDIKLNLSSITRSSVLDQEQLWGTLLASAAATRNPQVLADIGAEATD 61

Query: 63  VMTPAAIAAAKSAASVMAMNNVYYRFVHLVSNPEYKTMPPRLRMNVIGNPGVDKSDFELW 122
            ++ AA  AA  AA++M MNNV+YR    +    Y  + P LRMN+I NPG+ K++FELW
Sbjct: 62  HLSAAARHAALGAAAIMGMNNVFYRGRGFLEG-RYDDLRPGLRMNIIANPGIPKANFELW 120

Query: 123 SLAVSAINGCGACVDAHEKTLRAEGVSSGVIQTAVRFAAIVQSVAVA---IEAAGPA 176
           S AVSAINGC  C+ AHE TLR  GV    I  A++ AAIV  VA A   IEA  P+
Sbjct: 121 SFAVSAINGCSHCLVAHEHTLRTVGVDREAIFEALKAAAIVSGVAQALATIEALSPS 177


>MT2504 [S] COG2128 Uncharacterized conserved protein MtC Mycobacterium
           tuberculosis CDC1551
          Length = 177

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 113/177 (63%), Gaps = 4/177 (2%)

Query: 3   SIEQLNETIPNFAKDVRLNLASLLADDTLSPQRQYGLLLASAIATRNAALITAIEAAATA 62
           SIE+L   +P +AKD++LNL+S+     L  ++ +G LLASA ATRN  ++  I A AT 
Sbjct: 2   SIEKLKAALPEYAKDIKLNLSSITRSSVLDQEQLWGTLLASAAATRNPQVLADIGAEATD 61

Query: 63  VMTPAAIAAAKSAASVMAMNNVYYRFVHLVSNPEYKTMPPRLRMNVIGNPGVDKSDFELW 122
            ++ AA  AA  AA++M MNNV+YR    +    Y  + P LRMN+I NPG+ K++FELW
Sbjct: 62  HLSAAARHAALGAAAIMGMNNVFYRGRGFLEG-RYDDLRPGLRMNIIANPGIPKANFELW 120

Query: 123 SLAVSAINGCGACVDAHEKTLRAEGVSSGVIQTAVRFAAIVQSVAVA---IEAAGPA 176
           S AVSAINGC  C+ AHE TLR  GV    I  A++ AAIV  VA A   IEA  P+
Sbjct: 121 SFAVSAINGCSHCLVAHEHTLRTVGVDREAIFEALKAAAIVSGVAQALATIEALSPS 177


>CC3698 Non COG
          Length = 183

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 3/174 (1%)

Query: 3   SIEQLNETIPNFAKDVRLNLASLLADDTLSPQRQYGLLLASAIATRN-AALITAIEAAAT 61
           SIE L   +P++A D+  NLA L+ D  L P+ ++G  +ASA A      L     AA  
Sbjct: 2   SIEALRARLPDYAHDLGTNLALLVDDPALDPEARWGCFVASACAVGEPQTLRAIDAAATA 61

Query: 62  AVMTPAAIAAAKSAASVMAMNNVYYRFVHLVSNPEYKTMPPRLRMNVIGNPGVDKSDFEL 121
           A +T  A  AA+ AA++MAM NVY+R VHL+    Y+ +P RLR+N + + G     ++L
Sbjct: 62  AGLTAEANRAARKAAAMMAMTNVYFRAVHLMEGAAYQALPCRLRLNRLAHAGARGVTYDL 121

Query: 122 WSLAVSAINGCGACVDAHEKTLRAEGVSSGVIQTAVRFAAIVQSVA--VAIEAA 173
             +AVSAINGCGAC+D+HE  LR  GV    IQ A+R AA+V +VA  +A EAA
Sbjct: 122 SCVAVSAINGCGACLDSHEADLRGRGVEPTQIQAALRIAAVVSAVARTLAAEAA 175


>RSc1645 [S] COG2128 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 175

 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 99/174 (56%), Gaps = 4/174 (2%)

Query: 1   MSSIEQLNETIPNFAKDVRLNLASLLADDTLSPQRQYGLLLASAIATRNAALITAIEAAA 60
           M  ++ +   IP++AKD+RLNL   LA  +L      G+ LA+A A R+  +  AI  A 
Sbjct: 1   MDFLQAIKARIPDYAKDIRLNLDGTLARSSLQGSDAMGVALAAAFAARSKVIADAIRDAG 60

Query: 61  TAVMTPAAIAAAKSAASVMAMNNVYYRFVHLVSNPEYKTMPPRLRMNVI-GNPGVDKSDF 119
             V++P  +  A SAA++M MNNV+Y +V +  + +    P  LRMN   G+ GVDK  F
Sbjct: 61  --VLSPEEVNGALSAAALMGMNNVWYPYVEMADDADLAQQPAELRMNAYAGSGGVDKRRF 118

Query: 120 ELWSLAVSAINGCGACVDAHEKTL-RAEGVSSGVIQTAVRFAAIVQSVAVAIEA 172
           E+++LA S +  C  C+ +H   L R + +++  ++   R AA++ + A+ I A
Sbjct: 119 EMYALAASIVGKCHFCIQSHYAQLKRHQDMTTQQLRDVGRIAAVIHAAALVIAA 172