BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0021.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll1932 [O] COG0330 Membrane protease subunits, stomatin/prohibi... 394 e-109 SMb20989 [O] COG0330 Membrane protease subunits, stomatin/prohib... 340 3e-93 RSc0802 [O] COG0330 Membrane protease subunits, stomatin/prohibi... 336 3e-92 PA0452 [O] COG0330 Membrane protease subunits, stomatin/prohibit... 321 9e-88 aq_911 [O] COG0330 Membrane protease subunits, stomatin/prohibit... 270 3e-72 >mll1932 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Mlo Mesorhizobium loti Length = 254 Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/246 (81%), Positives = 225/246 (91%), Gaps = 1/246 (0%) Query: 1 MMLDYLTYAAIALLVIIFLTQAVRVLREYERGVIFTLGRFTGVKGPGLIILIPVVQQLVK 60 MM+ Y+ Y +AL+VI+FL+ AVR+LREY+RGV+FTLGRFTGVKGPGLIIL+P VQQ+VK Sbjct: 1 MMVGYVAYLVVALVVIMFLSAAVRILREYQRGVVFTLGRFTGVKGPGLIILVPFVQQMVK 60 Query: 61 VDLRVVVQVVPPQDVISRDNVSVKVNAVLYFRI-DPERAIIKVSDYMAATSQLAQTTLRS 119 VDLRVVVQ VPPQDVISRDNVSVKVNAVLYFRI D ERAII+V DYMAAT+QLAQTTLRS Sbjct: 61 VDLRVVVQDVPPQDVISRDNVSVKVNAVLYFRIVDAERAIIQVEDYMAATNQLAQTTLRS 120 Query: 120 VLGKHELDEMLAERDRLNADIQETLDKQTDVWGIKVTAVEIKDIDINETMVRAIAKQAEA 179 VLGKHELDEMLAERD+LN+DIQE LD++TD WGIKV+ VEIK +D+NE+M+RAIAKQAEA Sbjct: 121 VLGKHELDEMLAERDKLNSDIQEILDQRTDAWGIKVSNVEIKHVDLNESMIRAIAKQAEA 180 Query: 180 ERLRRAKVINAMGEQQAAEKLVEAGRILAQEPQAMQLRYFAALHDIAGERSSTVVFPLPM 239 ERLRRAKVINA GEQQAA KLVEAGR+LA EPQAMQLRYF ALHDIAGERSSTVVFPLP+ Sbjct: 181 ERLRRAKVINADGEQQAAAKLVEAGRMLAAEPQAMQLRYFEALHDIAGERSSTVVFPLPV 240 Query: 240 NLLDHL 245 +LL Sbjct: 241 DLLSQF 246 >SMb20989 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Sme Sinorhizobium meliloti Length = 256 Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 173/246 (70%), Positives = 209/246 (84%), Gaps = 1/246 (0%) Query: 8 YAAIALLVIIFLTQAVRVLREYERGVIFTLGRFTGVKGPGLIILIPVVQQLVKVDLRVVV 67 +AA L ++I + A+R+LREYERGVIFTLGRFTGVKGPGLI+L+P VQQ+V+VDLR V Sbjct: 10 FAAALLFLLIVVAYAIRILREYERGVIFTLGRFTGVKGPGLILLLPYVQQMVRVDLRTRV 69 Query: 68 QVVPPQDVISRDNVSVKVNAVLYFR-IDPERAIIKVSDYMAATSQLAQTTLRSVLGKHEL 126 VP QDVISRDNVSV+V+AV+YFR ID E++ I+V D+MAATSQLAQTTLRSVLGKH+L Sbjct: 70 LDVPSQDVISRDNVSVRVSAVIYFRVIDAEKSTIQVEDFMAATSQLAQTTLRSVLGKHDL 129 Query: 127 DEMLAERDRLNADIQETLDKQTDVWGIKVTAVEIKDIDINETMVRAIAKQAEAERLRRAK 186 DEMLAERDRLN DIQ+ LD QTD WGIKV VEIK +DINE+M+RAIA+QAEAER RRAK Sbjct: 130 DEMLAERDRLNEDIQKILDVQTDAWGIKVATVEIKHVDINESMIRAIARQAEAERERRAK 189 Query: 187 VINAMGEQQAAEKLVEAGRILAQEPQAMQLRYFAALHDIAGERSSTVVFPLPMNLLDHLA 246 VINA GEQQAA KL+EA ILA++PQAMQLRY + L+ IAGE++ST++FP PM + D LA Sbjct: 190 VINAEGEQQAAAKLLEAAEILARKPQAMQLRYLSTLNVIAGEKNSTIIFPFPMEIADMLA 249 Query: 247 PRREAT 252 ++E + Sbjct: 250 TKKEGS 255 >RSc0802 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Rso Ralstonia solanacearum Length = 249 Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 158/243 (65%), Positives = 203/243 (83%), Gaps = 1/243 (0%) Query: 1 MMLDYLTYAAIALLVIIFLTQAVRVLREYERGVIFTLGRFTGVKGPGLIILIPVVQQLVK 60 M + + L+++ + + RVLREYERGV+F LGRF VKGPGL++++P +QQ+V+ Sbjct: 1 MFYGFFSAGGFIFLIVLLVISSFRVLREYERGVVFLLGRFWRVKGPGLVLIVPAIQQMVR 60 Query: 61 VDLRVVVQVVPPQDVISRDNVSVKVNAVLYFRI-DPERAIIKVSDYMAATSQLAQTTLRS 119 VDLR +V VPPQDVIS DNVSVKVNAV+YFR+ DPERAII+V++++ ATSQLAQTTLR+ Sbjct: 61 VDLRTIVMDVPPQDVISHDNVSVKVNAVVYFRVVDPERAIIQVANFLEATSQLAQTTLRA 120 Query: 120 VLGKHELDEMLAERDRLNADIQETLDKQTDVWGIKVTAVEIKDIDINETMVRAIAKQAEA 179 +LGKHELDEMLAER++LN DIQ+ LD QTD WGIK+ VEIK +D+NE+M+RAIA+QAEA Sbjct: 121 ILGKHELDEMLAEREKLNLDIQKVLDIQTDPWGIKIANVEIKHVDLNESMIRAIARQAEA 180 Query: 180 ERLRRAKVINAMGEQQAAEKLVEAGRILAQEPQAMQLRYFAALHDIAGERSSTVVFPLPM 239 ER RRAKVI+A GE QAAEKL+EA R+LAQ+P+A+QLRY L IAG++SST+VFPLPM Sbjct: 181 ERERRAKVIHAEGELQAAEKLLEAARMLAQQPEAIQLRYLQTLTQIAGDKSSTIVFPLPM 240 Query: 240 NLL 242 ++L Sbjct: 241 DML 243 >PA0452 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Pae Pseudomonas aeruginosa Length = 264 Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 157/232 (67%), Positives = 194/232 (83%), Gaps = 5/232 (2%) Query: 24 RVLREYERGVIFTLGRFTGVKGPGLIILIPVVQQLVKVDLRVVVQVVPPQDVISRDNVSV 83 R+LREYERGV+F LGRF VKGPGL+++IP +QQ+V++DLR +V VPPQDVISRDNVSV Sbjct: 24 RILREYERGVVFQLGRFWKVKGPGLVLVIPAIQQMVRIDLRTIVLDVPPQDVISRDNVSV 83 Query: 84 KVNAVLYFRI-DPERAIIKVSDYMAATSQLAQTTLRSVLGKHELDEMLAERDRLNADIQE 142 KVNAV+YFR+ DP++AII+V +Y+AATSQLAQTTLR+VLGKHELDEMLAER+RLN DIQ+ Sbjct: 84 KVNAVVYFRVLDPQKAIIQVENYLAATSQLAQTTLRAVLGKHELDEMLAERERLNLDIQQ 143 Query: 143 TLDKQTDVWGIKVTAVEIKDIDINETMVRAIAKQAEAERLRRAKVINAMGEQQAAEKLVE 202 LD QTD WGIKV VEIK +D+NE+MVRAIA+QAEAER RRAKVI+A GE QA+EKL++ Sbjct: 144 VLDAQTDAWGIKVANVEIKHVDLNESMVRAIARQAEAERERRAKVIHAEGELQASEKLMQ 203 Query: 203 AGRILAQEPQAMQLRYFAALHDIAGERSSTVVFPLPMNLLD----HLAPRRE 250 A ++L ++ AMQLRY L IAG++SST+VFP+P+ L APR E Sbjct: 204 AAQMLGRQSGAMQLRYMQTLGAIAGDKSSTIVFPMPIELFGGKYAGAAPRNE 255 >aq_911 [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs Aae Aquifex aeolicus Length = 253 Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 136/240 (56%), Positives = 189/240 (78%), Gaps = 1/240 (0%) Query: 11 IALLVIIFLTQAVRVLREYERGVIFTLGRFTGVKGPGLIILIPVVQQLVKVDLRVVVQVV 70 IA+LV++FL A++V+ EYER V+F LGR G KGPGLII+IP++ ++V+V LR V V Sbjct: 11 IAILVLLFLASAIKVIPEYERAVVFRLGRVIGAKGPGLIIVIPIIDRIVRVSLRTVTLDV 70 Query: 71 PPQDVISRDNVSVKVNAVLYFRI-DPERAIIKVSDYMAATSQLAQTTLRSVLGKHELDEM 129 P QDVI++DNV+V+V+AV+YFR+ DP +AI++V DY ATSQ+AQTTLRSV G+ ELDE+ Sbjct: 71 PTQDVITKDNVTVQVDAVVYFRVVDPVKAIVEVEDYFYATSQIAQTTLRSVCGEAELDEL 130 Query: 130 LAERDRLNADIQETLDKQTDVWGIKVTAVEIKDIDINETMVRAIAKQAEAERLRRAKVIN 189 L++R+++N +QE +D+QTD WG+KV AVE+K ID+ E + +A+A+QAEAER RRAK+I+ Sbjct: 131 LSQREKINMKLQEIIDRQTDPWGVKVIAVELKKIDLPEELRKALARQAEAERERRAKIIS 190 Query: 190 AMGEQQAAEKLVEAGRILAQEPQAMQLRYFAALHDIAGERSSTVVFPLPMNLLDHLAPRR 249 A E QAA+KL+EA RILAQEP A+QLRY LH I + TV+FP P+ L++ + R+ Sbjct: 191 AEAEYQAAQKLLEAARILAQEPIAIQLRYLETLHTIGLHNAKTVIFPFPLELVEFMKGRK 250