BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0051.p (241 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO1932 [GEPR] COG0477 Permeases of the major facilitator superf... 183 2e-46 RSp0234 [GEPR] COG0477 Permeases of the major facilitator superf... 179 7e-45 PA2114 [GEPR] COG0477 Permeases of the major facilitator superfa... 154 1e-37 PM0835 [GEPR] COG0477 Permeases of the major facilitator superfa... 105 7e-23 RSp0797 [GEPR] COG0477 Permeases of the major facilitator superf... 104 2e-22 >YPO1932 [GEPR] COG0477 Permeases of the major facilitator superfamily Ype Yersinia pestis Length = 409 Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 139/217 (64%), Gaps = 2/217 (0%) Query: 5 WLSKLSAVERKTFFAAFGGLALDSMDTTIYALVTPALIATLSLSRPDAGILASSSLIGTA 64 W S L+ ERKTF AAFGG ALD++D ++ V L+A + AG+L++ +L+ +A Sbjct: 3 WFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSA 62 Query: 65 LGGWVAGIAADRFGRVRVLQFTILLVAVSTFAAAFADGFWYLLVARAVQGMGYGGEAAVG 124 +GGW AGI ADR+GRVR+LQ TIL ++ T FA F ++ + RA+QG+G+GGE AVG Sbjct: 63 IGGWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVG 122 Query: 125 AVLVAEVVSAGMRGRVAAAIQSGYAVGNALSVALFPVIFGWLSQDMAWRVFFAIGILPAL 184 +VL+ E+V A RG+ +QSG+A+G + L+ ++F LS++ AWR F IG+LPAL Sbjct: 123 SVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLPAL 182 Query: 185 LVFFVTASCRNPRSSSRRRHS--APPRRRTTSGPYSP 219 LV ++ + P + RH A RR ++ +SP Sbjct: 183 LVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSP 219 >RSp0234 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 416 Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 87/205 (42%), Positives = 134/205 (65%) Query: 3 LGWLSKLSAVERKTFFAAFGGLALDSMDTTIYALVTPALIATLSLSRPDAGILASSSLIG 62 GW ++SA E++TF+A FGG ALD++D +++LV P +IA + + +AG+++ +L+ Sbjct: 2 FGWFKEISAGEKRTFWACFGGWALDALDVQMFSLVIPTIIAAWHIGKTEAGLVSGITLVA 61 Query: 63 TALGGWVAGIAADRFGRVRVLQFTILLVAVSTFAAAFADGFWYLLVARAVQGMGYGGEAA 122 +ALGGW+AG DR GRVR LQ T+ +++TFA+AFA F L +AVQG G+GGE A Sbjct: 62 SALGGWIAGAMTDRLGRVRTLQITVAWFSLATFASAFAQNFEQFLALKAVQGFGFGGEWA 121 Query: 123 VGAVLVAEVVSAGMRGRVAAAIQSGYAVGNALSVALFPVIFGWLSQDMAWRVFFAIGILP 182 GAVL+AE + A RG+ +QS +AVG +V L+ + + + D+AWRV FA G+LP Sbjct: 122 AGAVLMAESIRASHRGKAMGTVQSAWAVGWGAAVLLYALTYSLVEPDLAWRVMFAAGVLP 181 Query: 183 ALLVFFVTASCRNPRSSSRRRHSAP 207 ALL+ ++ + P + + + P Sbjct: 182 ALLIIYIRRGVQEPAPAGAKAEAGP 206 >PA2114 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 423 Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 82/210 (39%), Positives = 119/210 (56%), Gaps = 2/210 (0%) Query: 2 NLGWLSKLSAVERKTFFAAFGGLALDSMDTTIYALVTPALIATLSLSRPDAGILASSSLI 61 + GW L ER+ F++ G LD MDT + + V P LIA + +AG + + +L+ Sbjct: 14 HFGWYRALDKQERRAFWSCKIGYGLDGMDTQMLSFVIPTLIALWGIGTGEAGFIHTMTLL 73 Query: 62 GTALGGWVAGIAADRFGRVRVLQFTILLVAVSTFAAAFADGFWYLLVARAVQGMGYGGEA 121 +A GGW+AGI +DR GRV LQ T+L A TF A + LLVAR + G G+GGE Sbjct: 74 ASAAGGWIAGILSDRIGRVLTLQLTVLWFAFFTFLCGLAQNYEQLLVARTLMGFGFGGEW 133 Query: 122 AVGAVLVAEVVSAGMRGRVAAAIQSGYAVGNALSVALFPVIFGWLSQDMAWRVFFAIGIL 181 GAVL+ EV+ A RG+ +QSG+A+G L+ L+ ++F L + AWR F +G+L Sbjct: 134 TAGAVLIGEVIKARDRGKAVGLVQSGWAIGWGLTAILYSLMFSLLPPEEAWRALFMLGLL 193 Query: 182 PALLVFFVTASCRNPR--SSSRRRHSAPPR 209 PAL V V + P +R+R+ + Sbjct: 194 PALFVLVVRRLVKEPEIYREARQRNQGADK 223 >PM0835 [GEPR] COG0477 Permeases of the major facilitator superfamily Pmu Pasteurella multocida Length = 405 Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Query: 23 GLALDSMDTTIYALVTPALIATLSLSRPDAGILASSSLIGTALGGWVAGIAADRFGRVRV 82 G A+D D I + A+ A L+L+ +G L + +LIG GG + G +D++GRVRV Sbjct: 19 GYAMDGFDLLILGFMLSAISADLALTPAQSGSLVTWTLIGAVAGGIIFGALSDKYGRVRV 78 Query: 83 LQFTILLVAVSTFAAAFADGFWYLLVARAVQGMGYGGEAAVGAVLVAEVVSAGMRGRVAA 142 L +TI+L AV T AFA G+W LL+ R + G+G GGE +G L AE A R + ++ Sbjct: 79 LTWTIVLFAVFTGLCAFAQGYWDLLIYRTIAGIGLGGEFGIGMALAAEAWPARHRAKASS 138 Query: 143 AIQSGYAVGNALSVALFPVIFGWLSQDMAWRVFFAIGILPALLVFFVTASCRNPRSSSRR 202 + G+ VG V ++ L + WR F +GI PA + +++ A P ++ Sbjct: 139 YVALGWQVG----VLGAALLTPLLLPHIGWRGMFLVGIFPAFVAWYLRAKLHEPEIFVKK 194 Query: 203 RHSAPPRRRTT 213 + +A R++T+ Sbjct: 195 Q-TALERQKTS 204 >RSp0797 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 418 Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 6/192 (3%) Query: 23 GLALDSMDTTIYALVTPALIATLSLSRPDAGILASSSLIGTALGGWVAGIAADRFGRVRV 82 G A+D D I + PA+ A L+L+ ++G L + +L+G GG + G +D +GRVRV Sbjct: 36 GYAMDGFDLLILGFMLPAISAALALTPGESGALVTWTLVGAVAGGILFGALSDAYGRVRV 95 Query: 83 LQFTILLVAVSTFAAAFADGFWYLLVARAVQGMGYGGEAAVGAVLVAEVVSAGMRGRVAA 142 L +TI+L AV T AFA GF LL+ R + G+G GGE +G L AE A R RV++ Sbjct: 96 LTWTIVLFAVFTGMCAFAQGFTDLLIYRTIAGIGLGGEFGIGMALAAEAWPAHKRARVSS 155 Query: 143 AIQSGYAVGNALSVALFPVIFGWLSQDMAWRVFFAIGILPALLVFFVTASCRNPRSSSRR 202 + G+ G V L ++ L + WR F +G+LPA + +F+ P R Sbjct: 156 YVALGWQCG----VLLAALLTPLLLPFIGWRGMFLLGVLPAAVAWFIRNRLHEPELFVRH 211 Query: 203 RHSAPPRRRTTS 214 H+ PR +T++ Sbjct: 212 AHA--PRGKTSA 221