BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0012.p         (157 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll4287 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Mlo Meso...   210   1e-54
SMc03861 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Sme Sin...   202   2e-52
AGc4898 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Atu Agro...   198   3e-51
BMEI0149 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Bme Bru...   196   1e-50
CC0198 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Ccr Caulo...   185   4e-47

>mll4287 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Mlo Mesorhizobium
           loti
          Length = 232

 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/137 (72%), Positives = 115/137 (83%)

Query: 1   MSPRGRPLTQTQVAELAAGPGPLIVCGRFEGIDQRVIEARGLEEVSIGDYVLSGGEIAAM 60
           MSPRG+PLTQ +V ELAAGPG +I+CGRFEG+DQR+IE RGLEEVSIGD++LSGGE AA+
Sbjct: 88  MSPRGKPLTQARVRELAAGPGAVILCGRFEGVDQRLIEVRGLEEVSIGDFILSGGEPAAL 147

Query: 61  ALIDACVRLLPGVMGKQASGTEESFSEGLLEYPQYTRPQEFEGRPIPEILISGDHAKVAA 120
            L+DA VRLLPGVMG   SG EESF  GLLE+P YTRPQEFEGR IP++L SG+H K+AA
Sbjct: 148 VLLDAVVRLLPGVMGNAVSGEEESFENGLLEHPHYTRPQEFEGREIPQVLTSGNHKKIAA 207

Query: 121 WRLAQSEALTAARRPDL 137
           WR  Q+E LT  RRPDL
Sbjct: 208 WRREQAEQLTRERRPDL 224


>SMc03861 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Sme Sinorhizobium
           meliloti
          Length = 240

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/148 (67%), Positives = 113/148 (76%)

Query: 1   MSPRGRPLTQTQVAELAAGPGPLIVCGRFEGIDQRVIEARGLEEVSIGDYVLSGGEIAAM 60
           MSPRGRPLTQ +V  LAAGPG ++VCGRFEG+DQRVI+ RGLEEVSIGDY+LSGGE AA+
Sbjct: 87  MSPRGRPLTQERVRALAAGPGAVVVCGRFEGVDQRVIDTRGLEEVSIGDYILSGGEPAAL 146

Query: 61  ALIDACVRLLPGVMGKQASGTEESFSEGLLEYPQYTRPQEFEGRPIPEILISGDHAKVAA 120
            L+DA VR+LPGVMG Q SG  ESF  GLLE+P YTRPQ FEG  IP +L SG+HA VA 
Sbjct: 147 VLLDAVVRILPGVMGNQLSGVHESFEGGLLEHPHYTRPQIFEGHEIPAVLTSGNHAAVAQ 206

Query: 121 WRLAQSEALTAARRPDLWARKAGQKAAP 148
           WR A +  LTA RRPDL  R    K  P
Sbjct: 207 WREATARRLTAERRPDLLERARHPKRDP 234


>AGc4898 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 232

 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 96/137 (70%), Positives = 110/137 (80%)

Query: 1   MSPRGRPLTQTQVAELAAGPGPLIVCGRFEGIDQRVIEARGLEEVSIGDYVLSGGEIAAM 60
           MSPRG+PL+Q +V ELAAG G +IVCGRFEG+DQRVIEARGLEEVSIGDY+LSGGE AA+
Sbjct: 87  MSPRGKPLSQNRVRELAAGDGAIIVCGRFEGVDQRVIEARGLEEVSIGDYILSGGEPAAL 146

Query: 61  ALIDACVRLLPGVMGKQASGTEESFSEGLLEYPQYTRPQEFEGRPIPEILISGDHAKVAA 120
            L+DA VR+LPGVMG   SG  ESF  GLLE+P YTRPQ +EGR IP IL SG+HA +  
Sbjct: 147 TLLDAVVRILPGVMGNDLSGVHESFEGGLLEHPHYTRPQLWEGRDIPAILTSGNHAAIDK 206

Query: 121 WRLAQSEALTAARRPDL 137
           WR  Q+ ALT  RRPDL
Sbjct: 207 WRHEQALALTKERRPDL 223


>BMEI0149 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Bme Brucella
           melitensis
          Length = 241

 Score =  196 bits (499), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 110/138 (79%)

Query: 1   MSPRGRPLTQTQVAELAAGPGPLIVCGRFEGIDQRVIEARGLEEVSIGDYVLSGGEIAAM 60
           M+PRG+PLTQ +V  LA G G +I+CGRFEG+D+RVIE R LEE+SIGDY+LSGGE AA+
Sbjct: 91  MTPRGKPLTQERVRALADGAGAIILCGRFEGVDERVIEGRNLEEISIGDYILSGGETAAI 150

Query: 61  ALIDACVRLLPGVMGKQASGTEESFSEGLLEYPQYTRPQEFEGRPIPEILISGDHAKVAA 120
            L+DA VRLLPGVMG + SG  ESF  GLLE+P YTRPQE+EGR IP+IL SG+H  +  
Sbjct: 151 VLLDAVVRLLPGVMGNRESGETESFETGLLEHPHYTRPQEWEGRAIPDILTSGNHGAIDK 210

Query: 121 WRLAQSEALTAARRPDLW 138
           WRL Q+E +T  RRPDLW
Sbjct: 211 WRLEQAERITRERRPDLW 228


>CC0198 [J] COG0336 tRNA-(guanine-N1)-methyltransferase Ccr Caulobacter
           vibrioides
          Length = 245

 Score =  185 bits (469), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 90/147 (61%), Positives = 110/147 (74%), Gaps = 1/147 (0%)

Query: 1   MSPRGRPLTQTQVAELAAGPGPLIVCGRFEGIDQRVIEARGLEEVSIGDYVLSGGEIAAM 60
           MS RGRPLTQ +V E +  PG +++CGRFEG+DQRV++ARG EEVS+GD VL+GGE AAM
Sbjct: 87  MSARGRPLTQARVREWSKAPGIVVLCGRFEGVDQRVLDARGFEEVSVGDAVLAGGEAAAM 146

Query: 61  ALIDACVRLLPGVMGKQASGTEESFSEGLLEYPQYTRPQEFEGRPIPEILISGDHAKVAA 120
            +I+ACVRL PGV+G   S  EESF +GLLE+PQYTRP+ FE   IPE+L+SGDH K+  
Sbjct: 147 VVIEACVRLAPGVLGNIESTLEESFEDGLLEHPQYTRPRTFEELDIPEVLLSGDHKKIDQ 206

Query: 121 WRLAQSEALTAARRPDLW-ARKAGQKA 146
           WR    E  T  RRPDLW A  A Q+A
Sbjct: 207 WRKRMREETTRERRPDLWEAHLANQQA 233