BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0040.0008.p (462 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr3470 [R] COG2244 Membrane protein involved in the export of O... 309 1e-83 SMc00743 [R] COG2244 Membrane protein involved in the export of ... 249 7e-66 AGl2615 [R] COG2244 Membrane protein involved in the export of O... 238 2e-62 mlr6757 [R] COG2244 Membrane protein involved in the export of O... 98 3e-20 PAB0783 [R] COG2244 Membrane protein involved in the export of O... 75 3e-13 >mlr3470 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Mlo Mesorhizobium loti Length = 423 Score = 309 bits (791), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 166/407 (40%), Positives = 252/407 (61%), Gaps = 2/407 (0%) Query: 45 FAIRVISAAIAYLAQILLARWMSGSDYGIYVYVWTWVLLLGSTMDFGIAPSAQKIIPEYR 104 F+IR++SA IA+++Q+L+ARWM +YGI+V VW ++++G+ G S + IPEYR Sbjct: 6 FSIRIVSAVIAFISQVLMARWMGSFEYGIFVLVWVTMVIVGNLACLGFHTSVIRFIPEYR 65 Query: 105 ARGDLAALRGFLSGGRWVVLATSSMVALLLAGLIHLASPWIDPNAVVPLYIGCLTLPPFV 164 RG + LRG + R VL S+++A L A + LA+PWI+ V+P +G + LP Sbjct: 66 ERGLMDELRGIVVASRLFVLIASTIIAGLGALGVWLAAPWIENYYVIPFILGVICLPMIA 125 Query: 165 VANTQDGISRAHDWMQLGLMPQFIVRQGLIIALTAGALALGLNLGATAAMIASAAAVYIA 224 +++ G +RA+ W L P +++R LI+ A L G A A+ AS AA Y+ Sbjct: 126 LSDLLQGQARANSWALFALSPTYLIRPVLILLFMALMLLAGYAADARTAIFASIAATYVT 185 Query: 225 AIGQMVVLNRRLTAHLGVGEKSYDVKGWFAISLPIMLVESFYLLLGYTDVLMLQQFRSPE 284 + Q+V + R+ + G WF +SLPI LVESF+ LL DVLM+ + P Sbjct: 186 TLAQLVGVTHRMERQIPAGPMKVHFAQWFIVSLPIFLVESFFFLLTNADVLMVGAYMDPN 245 Query: 285 EVGIYFAVVKTLALVSFVHYAMAATTAHRFAEYNAIGDKDRLSAYVAHAISWTFWPSLLA 344 +V +YFA VKTLALV FV++A+ A A R+A++ G+ ++L+ + +SWTFWPSLL Sbjct: 246 DVAVYFATVKTLALVHFVYFAVKAGVAQRYAQFTH-GEPEKLAVFARETVSWTFWPSLLM 304 Query: 345 TVALLAFGKPLLWLFGPKFVDGYSIMFVAAIGLVVRSAIGPVERLLNMLGHQSICATAYA 404 + +LA GKP+L LFGP+F GY ++F+ G+V R+A+GP E LL M G+Q+ICA YA Sbjct: 305 ALLVLALGKPMLVLFGPEFTSGYPLLFLLVFGVVARAAVGPCESLLTMSGNQNICAAVYA 364 Query: 405 VSFLMNVGLCIALVPRYGGMGGA-STSLSLTFETILLFYVVRSRLGL 450 ++ N+GL + L+PR+G G A +T+ ++ FE L + V +LG+ Sbjct: 365 MTLAFNIGLNVVLIPRFGLWGAAMATAFAMIFEASALSFTVWRKLGI 411 >SMc00743 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Sme Sinorhizobium meliloti Length = 462 Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 154/436 (35%), Positives = 242/436 (55%), Gaps = 1/436 (0%) Query: 16 RVARLRDLAARALGGTKEASVTKRLAGMIFAIRVISAAIAYLAQILLARWMSGSDYGIYV 75 R+ RL A L G + +R+A + F IR++SAAIA+++QI+LAR + +YGI++ Sbjct: 9 RLPRLLHGLAPLLAGDDPRNRAQRVALIAFLIRIVSAAIAFVSQIVLARLVGEFEYGIFI 68 Query: 76 YVWTWVLLLGSTMDFGIAPSAQKIIPEYRARGDLAALRGFLSGGRWVVLATSSMVALLLA 135 +VW V+L G+ G + + +PEY LA +RG + R + +++++A + Sbjct: 69 FVWVLVVLFGNLSCLGFHATVIRFLPEYHTTAALANIRGLTTTARVFAMLSATVLAAVGG 128 Query: 136 GLIHLASPWIDPNAVVPLYIGCLTLPPFVVANTQDGISRAHDWMQLGLMPQFIVRQGLII 195 + L I+ V+PLY+G TLP + + DG +RAH W + + P ++VR LI+ Sbjct: 129 AGLWLFGSAIESYYVIPLYLGLFTLPMIALGDVLDGTARAHSWPIVAMSPTYLVRPLLIL 188 Query: 196 ALTAGALALGLNLGATAAMIASAAAVYIAAIGQMVVLNRRLTAHLGVGEKSYDVKGWFAI 255 A+A GL AT AM A+ AA Y+ +GQ V + RL H G ++ W ++ Sbjct: 189 GFMVIAIAAGLPRDATTAMGAALAAAYVTTLGQFVTMAWRLGRHYVRGPMKIELGRWLSV 248 Query: 256 SLPIMLVESFYLLLGYTDVLMLQQFRSPEEVGIYFAVVKTLALVSFVHYAMAATTAHRFA 315 SLPI LV+ F LL +DV+++ + P++V +YFA KT+ALV FV +A+ A RF+ Sbjct: 249 SLPIFLVDGFGFLLTNSDVVIVGLYLKPDDVAVYFAAAKTMALVHFVMFAVKAAAGPRFS 308 Query: 316 EYNAIGDKDRLSAYVAHAISWTFWPSLLATVALLAFGKPLLWLFGPKFVDGYSIMFVAAI 375 A GD+ +L+ + W+FWPSL+ +LA G LL LFGP F G +M + Sbjct: 309 AAMAAGDRRQLAEIAVESARWSFWPSLVIGGCVLAAGNMLLSLFGPAFTTGAPLMAILLT 368 Query: 376 GLVVRSAIGPVERLLNMLGHQSICATAYAVSFLMNVGLCIALVPRYGGMGGASTSLSLTF 435 G++ ++ +GP E LL M G Q +C YA + N+ L + L+P +G G A+ + F Sbjct: 369 GILAKAFVGPAETLLTMAGRQKLCVLLYAAALGANIALNVTLIPVFGLTGAAAATAGAMF 428 Query: 436 -ETILLFYVVRSRLGL 450 E +L + VR G Sbjct: 429 VEAAILHFAVRRTFGF 444 >AGl2615 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 474 Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 152/459 (33%), Positives = 240/459 (52%), Gaps = 7/459 (1%) Query: 7 QSATSA-PLGRVARLRDLAARA---LGGTKEASVTKRLAGMIFAIRVISAAIAYLAQILL 62 SA A P A+L LAA+ L G E S +R+A + FA+R++SA IA+++QI+L Sbjct: 8 NSAEKALPASLRAKLAPLAAKVAVLLSGRDEVSRAQRMALVAFAVRIVSAGIAFISQIIL 67 Query: 63 ARWMSGSDYGIYVYVWTWVLLLGSTMDFGIAPSAQKIIPEYRARGDLAALRGFLSGGRWV 122 AR M +YG++ +VW V+L G+ G + + +P YR + G S R Sbjct: 68 ARLMGEFEYGLFAFVWVLVILFGNLSCLGFHTTVIRFLPGYRLEEAHDKIMGLTSTARVF 127 Query: 123 VLATSSMVALLLAGLIHLASPWIDPNAVVPLYIGCLTLPPFVVANTQDGISRAHDWMQLG 182 + +S +A+ ++ I ++P+ + TLP + + +G +RA+ W Sbjct: 128 AMLAASALAIFGFVFLYFFGERIASYYLIPVALALFTLPMVALGDVLNGTARANGWAVSA 187 Query: 183 LMPQFIVRQGLIIALTAGALALGLNLGATAAMIASAAAVYIAAIGQMVVLNRRLTAHLGV 242 L P +IVR LI+ A+ G AT AM+ + A Y+ + +NRRL H Sbjct: 188 LSPTYIVRPVLILLFMMAAVHFGAEKTATTAMLMALLATYVTTLFHFAFMNRRLNRHFRS 247 Query: 243 GEKSYDVKGWFAISLPIMLVESFYLLLGYTDVLMLQQFRSPEEVGIYFAVVKTLALVSFV 302 + + W + P+ L++ L+ +DV+++ + P++VGIYFA KT+ L+ FV Sbjct: 248 TARKVHFRHWIRFAFPMFLIDGIGFLMTNSDVVIVGLYLPPDQVGIYFAAAKTIVLMQFV 307 Query: 303 HYAMAATTAHRFAEYNAIGDKDRLSAYVAHAISWTFWPSL-LATVALLAFGKPLLWLFGP 361 +++ A A R A + D+ L+ + A W FWPSL + +V LLA G LL LFGP Sbjct: 308 FFSVQAAAAPRLAALMSANDRQGLAGFAGQAARWAFWPSLAVGSVVLLA-GPFLLSLFGP 366 Query: 362 KFVDGYSIMFVAAIGLVVRSAIGPVERLLNMLGHQSICATAYAVSFLMNVGLCIALVPRY 421 FV GY +MF G + ++ IGP E LLNM G Q +C Y + F N+ L +AL+P Y Sbjct: 367 GFVQGYQLMFFLFAGFLAKAMIGPGETLLNMAGKQKLCVVLYIIIFGCNIALNMALIPVY 426 Query: 422 G-GMGGASTSLSLTFETILLFYVVRSRLGLHVLAFGRRR 459 G A+ ++++ E +LL +R LG+ + AF R Sbjct: 427 GLAGAAAAVAIAMCMEAVLLHIAIRRTLGIVLFAFNDPR 465 >mlr6757 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Mlo Mesorhizobium loti Length = 546 Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 105/401 (26%), Positives = 169/401 (42%), Gaps = 11/401 (2%) Query: 32 KEASVTKRLA-GMIFA--IRVISAAIAYLAQILLARWMSGSDYGIYVYVWTWVLLLGSTM 88 + V RLA +FA I + A + LAQ+ +AR + DYGIY YV W +L Sbjct: 89 RNKDVGSRLARASVFALLIYIGGAGLTSLAQLAIARLIGPRDYGIYAYVLAWTSVLAYLA 148 Query: 89 DFGIAPSAQKIIPEYRARGDLAALRGFLSGGRWVVLATSSMVALLLAGLIHLASPWIDPN 148 G S + +P YRA G L RG + L +++ + A L+ S P+ Sbjct: 149 TLGFNVSLLRFVPAYRANGRLDLARGVIRFALQRSLLAATLFGMAGAALVLFFSGQAQPD 208 Query: 149 AV-----VPLYIGCLTLPPFVVANTQDGISRAHDWMQLGLMPQFIVRQGLIIALTAGALA 203 + +G +P + RA + L+P+ IVR GL++ L A Sbjct: 209 HTQRGLEISTMLGMAAVPLITAYAIGATLVRAFGGVVSALLPERIVRDGLLLILVAIMAK 268 Query: 204 LGL-NLGATAAMIASAAAVYIAAIGQMVVLNRRLTAH-LGVGEKSYDVKGWFAISLPIML 261 GL + A M+A + I +G + + R+ L +Y+ +GW+ P+ML Sbjct: 269 SGLWVVHAPQVMLAVLTSSAIT-VGLVFITARKFEPPGLRQALPAYEPRGWWLAVPPLML 327 Query: 262 VESFYLLLGYTDVLMLQQFRSPEEVGIYFAVVKTLALVSFVHYAMAATTAHRFAEYNAIG 321 + + + VL+L E GI+ + LV A+A + A+ +A G Sbjct: 328 ITGLDVFVSRAGVLVLGWTDHIREAGIFALALNVAMLVGLSRIAVATMFSPTAADLHARG 387 Query: 322 DKDRLSAYVAHAISWTFWPSLLATVALLAFGKPLLWLFGPKFVDGYSIMFVAAIGLVVRS 381 D+ L A A + +++ + ++ +P L FG F G I V +G V + Sbjct: 388 DQKGLQQLFARATLLSAGGAVVVAIPMIVIAEPFLSFFGEGFDAGAPIARVLILGYVFVA 447 Query: 382 AIGPVERLLNMLGHQSICATAYAVSFLMNVGLCIALVPRYG 422 GP + LL M G++ AT + N+ C V YG Sbjct: 448 LCGPQQNLLAMTGNEWAAATTMIAGAMANIIACAVGVEIYG 488 >PAB0783 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Pab Pyrococcus abyssi Length = 511 Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 106/434 (24%), Positives = 188/434 (43%), Gaps = 24/434 (5%) Query: 39 RLAGMIFAIRVISAAIAYLAQILLARWMSGSDYGIYVYVWTWVLLLGSTMDFGIAPSAQK 98 R G+IFA +IS + ++ ++L+AR S SDYG++ T + + G S + Sbjct: 14 RGTGIIFAGTLISTFLGFITRVLIARHFSESDYGVFNLALTILTISFIVATLGFPTSLPR 73 Query: 99 IIPEYRARGDLAALRGFLSGGRWVVLATS-SMVALLLAGLIHLASPWIDPNAVVPLYIGC 157 IP YR + R +S VV+ATS ++A L G +A + +P V PL + Sbjct: 74 EIPVYREKYPEKVNR-LISTVILVVVATSIILMAFLFLGSQAIAEVFKEPKLVEPLKVIS 132 Query: 158 LTLPPFVVANTQDGISRAHDWMQLGLMPQFIVRQGLIIALTAGALALGLNLGATAAMIAS 217 L LP + + + IS+ ++ + I L +A + G ++ A Sbjct: 133 LALPFYALTSMLVSISQGFGRVREKVYFTNITYPTLFLAFATLGVIFGKSIKAVVIAYTL 192 Query: 218 AAAVYIAAI----GQMVVLNRRLTAHLGVGEKSYDVKGWFAISLPIMLVESFYLLLGYTD 273 + V + I ++ + LT L + K SLP++L ++ +TD Sbjct: 193 SWVVTLFLIVWDYSRVKIFTLELTFDLNIA------KSLLTFSLPLLLSGILGFVMTWTD 246 Query: 274 VLMLQQFRSPEEVGIY-----FAVVKTLALVSFVHYAMAATTAHRFAEYNAIGDKDRLSA 328 LM+ + + EVGIY A + + L SF + M + ++ A G + Sbjct: 247 TLMIGYYLTSREVGIYNSATPLAKMLPIFLASFSYLYMPIS-----SQLYAQGKVKEMGR 301 Query: 329 YVAHAISWTFWPSLLATVALLAFGKPLL-WLFGPKFVDGYSIMFVAAIGLVVRSAIGPVE 387 WTF +L + L+ F + + ++FG K++D + + AIG + + +G Sbjct: 302 VYQMTTKWTFLLTLPMFLMLVLFPQATISFIFGEKYLDASVALQILAIGFMFHTFLGLNG 361 Query: 388 RLLNMLGHQSICATAYAVSFLMNVGLCIALVPRYGGMGGA-STSLSLTFETILLFYVVRS 446 L ++G + ++ L N+ L IAL+P YG G A +TS+S + + Sbjct: 362 LTLVIIGESKLNMIGDLIAALSNILLNIALIPFYGVNGAAFATSVSYIVANFFRSFWLYR 421 Query: 447 RLGLHVLAFGRRRP 460 + G+H +P Sbjct: 422 KTGIHPFTKNYLKP 435