BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0019.p (1180 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1829_1 [I] COG0439 Biotin carboxylase Ccr Caulobacter vibrioides 490 e-138 YBR208c_2 [I] COG0439 Biotin carboxylase Sce Saccharomyces cerev... 486 e-136 CC1829_3 Non COG 416 e-115 mll0871 [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subu... 413 e-114 MJ1229 [I] COG0439 Biotin carboxylase Mja Methanococcus jannaschii 411 e-114 >CC1829_1 [I] COG0439 Biotin carboxylase Ccr Caulobacter vibrioides Length = 448 Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust. Identities = 278/448 (62%), Positives = 332/448 (74%) Query: 1 MFSKVLIANRGEIAGRIGRTLRRMGISSVAVYSDADRFTRPVLDADEAVRIGPAPAAESY 60 MF KVLIANRG IA RI RTLR MG+ SVAV+SDAD + V ADEAVR+GPAPAAESY Sbjct: 1 MFDKVLIANRGAIACRIIRTLRAMGVKSVAVFSDADAGSLHVSMADEAVRLGPAPAAESY 60 Query: 61 LNVDAIMAACLATGAQAVHPGYGFLSENRRFAERLAEHGIKFIGPRPEHLDAFGLKHRAR 120 L D ++AA ATGAQA+HPGYGFLSE+ FA+ + G+ FIGP +++ AFGLKH AR Sbjct: 61 LRADLVLAAAQATGAQAIHPGYGFLSESAAFAQACEDAGVTFIGPSADNIRAFGLKHTAR 120 Query: 121 EIAERSGVPLLPGSGLLETIDEAVQQAEAIGFPVMLKSTAGGGGIGMQLCHDMATLRERF 180 ++A+ GVPL PG+ LL A+ A+ IGFPV+LK+TAGGGGIGM++C + E F Sbjct: 121 DLAQAHGVPLAPGTDLLTDPAAALAAAQRIGFPVILKATAGGGGIGMRVCESAEAVEEAF 180 Query: 181 ESVQRTARASFGDARVYLERFVARARHIEVQIFGNGKGDVVALGERDCSLQRRNQKVFEE 240 +V+R A +F D V+LER+V +ARHIEVQ+FG+G G V ALGERDCSLQRRNQKV EE Sbjct: 181 AAVRRLATGNFSDGGVFLERYVHKARHIEVQVFGDGAGRVAALGERDCSLQRRNQKVVEE 240 Query: 241 TPAPGLSADIRRRLHAAAVSLGKAVSYESAGTVEFIYDVEREDFYFLEVNTRLQVEHPVT 300 TPAPGL A R L AAV L KA +Y SAGTVEF+YD +R+DF+FLEVNTRLQVEH VT Sbjct: 241 TPAPGLPAATRTALLDAAVRLAKAANYRSAGTVEFLYDADRDDFFFLEVNTRLQVEHGVT 300 Query: 301 EQVTGVDLVEWMIRQAAGDDVLGQAGALAPKGAAIEVRLYAENPGTGFRPSAGRLTQVSF 360 EQVTGVDLVEWM+R AAGD AP+GAAI+VRLYAE+P +RPSAG LT+V+F Sbjct: 301 EQVTGVDLVEWMVRGAAGDFSFLDTPPPAPRGAAIQVRLYAEDPAQDYRPSAGVLTEVAF 360 Query: 361 SPDARIDGWIETGTEVSPFYDPMLAKIIVSAETREAAIARLSQALDDTVVAGIETNLDYL 420 R DGW+ GTEVS FYDPMLAK+IV AE R AA+A L ALD T +AGIETNLD+L Sbjct: 361 PEGVRADGWVVDGTEVSAFYDPMLAKLIVIAEHRPAAVAALQAALDATRLAGIETNLDWL 420 Query: 421 RAIAASDVFRGGQVATSVLGAFAYRPRT 448 R + S F G+V+T L A+ P T Sbjct: 421 RTVTRSQPFVSGEVSTRALETIAWAPDT 448 >YBR208c_2 [I] COG0439 Biotin carboxylase Sce Saccharomyces cerevisiae Length = 448 Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust. Identities = 238/446 (53%), Positives = 317/446 (71%) Query: 1 MFSKVLIANRGEIAGRIGRTLRRMGISSVAVYSDADRFTRPVLDADEAVRIGPAPAAESY 60 +F VLIANRGEIA RI +TL+++GI SVAVYSD D++++ V DAD +V + AA++Y Sbjct: 1 LFDTVLIANRGEIAVRIIKTLKKLGIRSVAVYSDPDKYSQHVTDADVSVPLHGTTAAQTY 60 Query: 61 LNVDAIMAACLATGAQAVHPGYGFLSENRRFAERLAEHGIKFIGPRPEHLDAFGLKHRAR 120 L+++ I+ A T AQA+ PGYGFLSEN F++ GI F+GP + + GLKH AR Sbjct: 61 LDMNKIIDAAKQTNAQAIIPGYGFLSENADFSDACTSAGITFVGPSGDIIRGLGLKHSAR 120 Query: 121 EIAERSGVPLLPGSGLLETIDEAVQQAEAIGFPVMLKSTAGGGGIGMQLCHDMATLRERF 180 +IA+++GVPL+PGS L+ +++EA + A + +PVM+KSTAGGGGIG+Q + F Sbjct: 121 QIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMVKSTAGGGGIGLQKVDSEEDIEHIF 180 Query: 181 ESVQRTARASFGDARVYLERFVARARHIEVQIFGNGKGDVVALGERDCSLQRRNQKVFEE 240 E+V+ FGDA V+LERF+ ARH+EVQ+ G+G G +ALGERDCSLQRRNQKV EE Sbjct: 181 ETVKHQGETFFGDAGVFLERFIENARHVEVQLMGDGFGKAIALGERDCSLQRRNQKVIEE 240 Query: 241 TPAPGLSADIRRRLHAAAVSLGKAVSYESAGTVEFIYDVEREDFYFLEVNTRLQVEHPVT 300 TPAP L R L AA SLG ++Y+ AGTVEFIYD ++++FYFLEVNTRLQVEHP+T Sbjct: 241 TPAPNLPEKTRLALRKAAESLGSLLNYKCAGTVEFIYDEKKDEFYFLEVNTRLQVEHPIT 300 Query: 301 EQVTGVDLVEWMIRQAAGDDVLGQAGALAPKGAAIEVRLYAENPGTGFRPSAGRLTQVSF 360 E VTG+DLVEWMIR AA D + + G ++E RLYAENP FRPS G L V F Sbjct: 301 EMVTGLDLVEWMIRIAANDAPDFDSTKVEVNGVSMEARLYAENPLKNFRPSPGLLVDVKF 360 Query: 361 SPDARIDGWIETGTEVSPFYDPMLAKIIVSAETREAAIARLSQALDDTVVAGIETNLDYL 420 AR+D W++ GT +SP YDP LAKIIV + R+ AI++L+QAL++T V G TN+DYL Sbjct: 361 PDWARVDTWVKKGTNISPEYDPTLAKIIVHGKDRDDAISKLNQALEETKVYGCITNIDYL 420 Query: 421 RAIAASDVFRGGQVATSVLGAFAYRP 446 ++I SD F +V+T++L ++ Y P Sbjct: 421 KSIITSDFFAKAKVSTNILNSYQYEP 446 >CC1829_3 Non COG Length = 338 Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust. Identities = 206/318 (64%), Positives = 242/318 (76%), Gaps = 1/318 (0%) Query: 779 VVYRRAGDDNLLVEYGPMELDIALRLRVHVLAQALEEAKLAGLIDLTPGIRSLQIHYDGT 838 V+YRR GD +LLVEYGP+ LD+ LRLR+H L L+ L G+IDLTPGIRSLQ+HYD Sbjct: 1 VLYRRQGDQHLLVEYGPIVLDLELRLRIHALLLDLQAQALEGVIDLTPGIRSLQVHYDSR 60 Query: 839 MLSRGKLLDVLRRIERELPPVDAMRVPSRTVHLPLSWRDPQAELAMRKYQELVRADAPWC 898 LS+ +LLD+L E L +D +PSR VHLPLSW+DP + KY + VR DAPWC Sbjct: 61 RLSQARLLDILVAAEDRLGGLDDFEIPSRVVHLPLSWKDPAIYQTIDKYMQAVRDDAPWC 120 Query: 899 PSNVEFIRRINGLASEDDVRRIVFDADYFVLGLGDVYLGAPVATPLDPRHRLVTTKYNPA 958 P N+EFIRR+NGL DDV++IVFDA Y V+GLGDVYLGAPVATP+DPRHRLVTTKYNPA Sbjct: 121 PDNIEFIRRVNGLNGIDDVQKIVFDARYLVMGLGDVYLGAPVATPVDPRHRLVTTKYNPA 180 Query: 959 RTWTPENAVGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTWRTTRVFEPNHPWLLRFFDKI 1018 RTWTP N VGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTWR T F PWLLRFFD+I Sbjct: 181 RTWTPPNVVGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTWRQTDAFTDGKPWLLRFFDQI 240 Query: 1019 RFFPVDADELLDARAAFPHGQYDIRIEEGEFSYADYAKSLAEARPSIAAFKATQQSAFDA 1078 RFFPV A+EL++ R FP G+ IRIEE F +DY + LAE SIAAF++ +Q+AFDA Sbjct: 241 RFFPVSAEELVEWRRDFPLGRRAIRIEEETFRLSDYRRLLAENAESIAAFQSRRQAAFDA 300 Query: 1079 ERQRWREMKLDETPVESI 1096 ER W E K + VE++ Sbjct: 301 ERADW-EAKGEFARVEAL 317 >mll0871 [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit Mlo Mesorhizobium loti Length = 670 Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust. Identities = 226/448 (50%), Positives = 306/448 (68%), Gaps = 9/448 (2%) Query: 1 MFSKVLIANRGEIAGRIGRTLRRMGISSVAVYSDADRFTRPVLDADEAVRIGPAPAAESY 60 MF+K+LIANRGEIA R+ +T R+MGI++VAVYSDADR V ADEAV IGP+PAA+SY Sbjct: 1 MFTKILIANRGEIACRVIKTARKMGIATVAVYSDADRDAVHVEMADEAVHIGPSPAAQSY 60 Query: 61 LNVDAIMAACLATGAQAVHPGYGFLSENRRFAERLAEHGIKFIGPRPEHLDAFGLKHRAR 120 L + I+AAC TGAQAVHPGYGFLSE F E L + GI FIGP+P+ + A G K ++ Sbjct: 61 LVPEKIIAACKETGAQAVHPGYGFLSERAAFCEALEKEGIVFIGPKPKAIKAMGDKIESK 120 Query: 121 EIAERSGVPLLPG-SGLLETIDEAVQQAEAIGFPVMLKSTAGGGGIGMQLCHDMATLRER 179 + A + V +PG G++E D A + A IG+PVM+K++AGGGG GM++ + + +R+ Sbjct: 121 KFANAAKVSTVPGWLGVIENADHAEKIAGEIGYPVMIKASAGGGGKGMRIAWNQSEVRDG 180 Query: 180 FESVQRTARASFGDARVYLERFVARARHIEVQIFGNGKGDVVALGERDCSLQRRNQKVFE 239 F+ + A++SFGD RV++E+FV RHIE+Q+ + G+ + LGER+CS+QRRNQKV E Sbjct: 181 FDRARSEAKSSFGDDRVFIEKFVVDPRHIEIQVLADAHGNALYLGERECSIQRRNQKVAE 240 Query: 240 ETPAPGLSADIRRRLHAAAVSLGKAVSYESAGTVEFIYDVEREDFYFLEVNTRLQVEHPV 299 E P+P L A R+ + +V+L +AV Y+SAGTVEFI D ++ +FYFLE+NTRLQVEHPV Sbjct: 241 EAPSPFLDAKTRKAMGEQSVALARAVDYQSAGTVEFIVDKDK-NFYFLEMNTRLQVEHPV 299 Query: 300 TEQVTGVDLVEWMIRQAAGDDVLGQAGALAPKGAAIEVRLYAENPGTGFRPSAGRLTQVS 359 TE VTG+DLVE MIR AAG+ + + + G A+E RLYAE+P F PS GRLT+ Sbjct: 300 TELVTGIDLVEQMIRVAAGEKLSLKQSDIKLNGWAVESRLYAEDPYRNFLPSIGRLTRYR 359 Query: 360 FSPDA-------RIDGWIETGTEVSPFYDPMLAKIIVSAETREAAIARLSQALDDTVVAG 412 + R D + G+E+S FYDPMLAK+ A TR AI +S+ LD VV G Sbjct: 360 PPEEGQFGDVVIRNDTGVTEGSEISMFYDPMLAKLCTWAPTRIEAIDAMSEVLDSFVVDG 419 Query: 413 IETNLDYLRAIAASDVFRGGQVATSVLG 440 IE N+ +L A+ +R G ++T + Sbjct: 420 IEHNIPFLAALMQHPRWREGAISTGFIA 447 >MJ1229 [I] COG0439 Biotin carboxylase Mja Methanococcus jannaschii Length = 501 Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/450 (47%), Positives = 315/450 (70%), Gaps = 5/450 (1%) Query: 1 MFSKVLIANRGEIAGRIGRTLRRMGISSVAVYSDADRFTRPVLDADEAVRIGPAPAAESY 60 MF+KVLIANRGEIA RI R +GI +VAVYS+AD+ + ADEA IGPAPAA+SY Sbjct: 1 MFNKVLIANRGEIAIRIIRACWELGIKTVAVYSEADKRSLHATLADEAYCIGPAPAAKSY 60 Query: 61 LNVDAIMAACLATGAQAVHPGYGFLSENRRFAERLAEHGIKFIGPRPEHLDAFGLKHRAR 120 LN+DAI+ A+HPGYGFL+EN FA + + G +FIGP P+ ++A G K A+ Sbjct: 61 LNIDAILNVAEKAKVDAIHPGYGFLAENAEFARAVKKAGFEFIGPNPDAIEAMGSKINAK 120 Query: 121 EIAERSGVPLLPGS-GLLETIDEAVQQAEAIGFPVMLKSTAGGGGIGMQLCHDMATLRER 179 +I +++GVPL+PGS G +E IDEA++ AEAIGFPV++K++AGGGG+GM + + L+E Sbjct: 121 KIMKKAGVPLIPGSEGAIEDIDEAIEIAEAIGFPVVVKASAGGGGMGMSVAYSKEELKEV 180 Query: 180 FESVQRTARASFGDARVYLERFVARARHIEVQIFGNGKGDVVALGERDCSLQRRNQKVFE 239 ES + A+++FGD V++E+++ RHIE+Q+ G+ G+++ LG+R+CS+QRR+QK+ E Sbjct: 181 IESARNIAKSAFGDPTVFIEKYLENPRHIEIQLLGDKHGNIIHLGDRECSIQRRHQKLIE 240 Query: 240 ETPAPGLSADIRRRLHAAAVSLGKAVSYESAGTVEFIYDVEREDFYFLEVNTRLQVEHPV 299 E P+P ++ ++R R+ AA+ GKA++Y+SAGTVEF+Y E +FYFLE+NTR+QVEH V Sbjct: 241 EAPSPIMTEELRERMGEAAIKAGKAINYDSAGTVEFLY--ENGNFYFLEMNTRIQVEHTV 298 Query: 300 TEQVTGVDLVEWMIRQAAGDDVLGQAGALAPKGAAIEVRLYAENPGTGFRPSAG--RLTQ 357 TEQVTG+DLV+ MI+ AAG+++ + + +G AIE R+ AE+P F P G +L + Sbjct: 299 TEQVTGIDLVKAMIKIAAGEELTLKQEDVKIRGHAIECRINAEDPLNDFVPCPGKIKLYR 358 Query: 358 VSFSPDARIDGWIETGTEVSPFYDPMLAKIIVSAETREAAIARLSQALDDTVVAGIETNL 417 P RID + G E+ P+YD M+AK+I +RE AIAR+ +AL + V+ G++TN+ Sbjct: 359 SPGGPGVRIDSGVYGGAEIPPYYDSMIAKLITYGNSREEAIARMKRALREYVIIGVKTNI 418 Query: 418 DYLRAIAASDVFRGGQVATSVLGAFAYRPR 447 + RA+ + F G ++T + ++ R Sbjct: 419 PFHRAVLEEENFLKGNISTHYVEQNMHKLR 448