BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0014.p (249 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport... 339 4e-93 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 276 2e-74 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 205 8e-53 SMb20785 [E] COG0411 ABC-type branched-chain amino acid transpor... 185 6e-47 BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transpo... 181 1e-45 >RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 266 Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 158/246 (64%), Positives = 201/246 (81%) Query: 4 AIQVNAVEKSFGNVQIIRDLNLSVAKGERHAIIGPNGAGKSTTFNLISGHIKPTSGEIRL 63 A+++ V K FG +IIR +NL++ +GERHA+IGPNGAGKSTTFNLISG P++G +RL Sbjct: 7 ALELRDVRKRFGATEIIRGVNLTIGRGERHALIGPNGAGKSTTFNLISGRFAPSAGSVRL 66 Query: 64 NGEVTSGLRPFEINRRGLSRSFQVTNVFARMTVWENVRCAVLWATGHRYAFWKNVDNLPE 123 NGE +GL P+EINRRGLSRSFQ+TN+F R++V+EN+RCAVLW+ G++Y+FW + L + Sbjct: 67 NGEEIAGLAPYEINRRGLSRSFQITNIFHRLSVFENLRCAVLWSLGYQYSFWHRLAELRD 126 Query: 124 VKQRTAQILDDIHLSHRRDVPAGLLTYAEQRELEIGITIAGGASVIMLDEPTAGMSHAET 183 ++R +L+ I L+HR D AG LTYAEQR LEIGITIAGGA VI+LDEPTAGMS +E+ Sbjct: 127 ARERAEAVLEQIGLTHRHDAAAGTLTYAEQRALEIGITIAGGADVILLDEPTAGMSRSES 186 Query: 184 ERAVALIRRLTEGRTLVIVEHDMSVVFGLADRISVLVYGHIIASGTPEEIRGNPKVKEAY 243 + AV LIR++T G+TLV+VEHDMSVVFGLADRISVLVYG +IA+ TPE IR N +VKEAY Sbjct: 187 DHAVDLIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAIRNNRRVKEAY 246 Query: 244 LGEEID 249 LG +D Sbjct: 247 LGTTLD 252 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 138/248 (55%), Positives = 179/248 (72%), Gaps = 1/248 (0%) Query: 1 MTAAIQV-NAVEKSFGNVQIIRDLNLSVAKGERHAIIGPNGAGKSTTFNLISGHIKPTSG 59 MT I V + + KSFG IIR +NL+V GERHA+IGPNGAGKST F+LISG+ P+SG Sbjct: 2 MTKDILVLDQLNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSSG 61 Query: 60 EIRLNGEVTSGLRPFEINRRGLSRSFQVTNVFARMTVWENVRCAVLWATGHRYAFWKNVD 119 IR GE GL P +NR+GL+RSFQ+TN+F +TV+EN+R AV+ ++ FW+ V Sbjct: 62 SIRFQGEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPVS 121 Query: 120 NLPEVKQRTAQILDDIHLSHRRDVPAGLLTYAEQRELEIGITIAGGASVIMLDEPTAGMS 179 ++ +V +L+ + L+ R A L+Y+EQR LEIG+T+A +I+LDEP AGMS Sbjct: 122 SMRKVTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGMS 181 Query: 180 HAETERAVALIRRLTEGRTLVIVEHDMSVVFGLADRISVLVYGHIIASGTPEEIRGNPKV 239 ET+ V LIR +T+ RTL+IVEHDM VVF LADRISVLVYG IIA+GTP+EIR N +V Sbjct: 182 QEETDYTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENARV 241 Query: 240 KEAYLGEE 247 +EAYLGEE Sbjct: 242 REAYLGEE 249 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 102/241 (42%), Positives = 150/241 (62%) Query: 5 IQVNAVEKSFGNVQIIRDLNLSVAKGERHAIIGPNGAGKSTTFNLISGHIKPTSGEIRLN 64 ++ + K+F + D+NL V +G HA+IGPNGAGK+T FNL++ + PT G I N Sbjct: 7 LETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTRGTILFN 66 Query: 65 GEVTSGLRPFEINRRGLSRSFQVTNVFARMTVWENVRCAVLWATGHRYAFWKNVDNLPEV 124 G + RP +I RRG+ RSFQ++ VF ++V ENVR + G YAFW++ L + Sbjct: 67 GVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSEKTLAVL 126 Query: 125 KQRTAQILDDIHLSHRRDVPAGLLTYAEQRELEIGITIAGGASVIMLDEPTAGMSHAETE 184 R Q+LD + L+ L Y +R LEI T+A +++LDEPT GM H + + Sbjct: 127 NDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGMGHEDVD 186 Query: 185 RAVALIRRLTEGRTLVIVEHDMSVVFGLADRISVLVYGHIIASGTPEEIRGNPKVKEAYL 244 R LI+R+ EGRT+++VEH+M+VV +AD+I+VL G I+A G E++ NP+V EAY+ Sbjct: 187 RVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQVMEAYM 246 Query: 245 G 245 G Sbjct: 247 G 247 >SMb20785 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 254 Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 96/249 (38%), Positives = 148/249 (59%) Query: 1 MTAAIQVNAVEKSFGNVQIIRDLNLSVAKGERHAIIGPNGAGKSTTFNLISGHIKPTSGE 60 M+A +V +++SFG + + D++LS+A G+R A+IGPNGAGK+T NL++G++KP +GE Sbjct: 1 MSAIFEVRNLKRSFGGLAVTNDVSLSMAPGDRVALIGPNGAGKTTFVNLVTGNLKPDAGE 60 Query: 61 IRLNGEVTSGLRPFEINRRGLSRSFQVTNVFARMTVWENVRCAVLWATGHRYAFWKNVDN 120 +R+ GE + + RRGL RSFQVT +F MT E+V AVL G + N Sbjct: 61 VRIGGETVTNVDAIGRVRRGLVRSFQVTRLFQDMTPAEHVALAVLQRDGRAGRMFGNFLA 120 Query: 121 LPEVKQRTAQILDDIHLSHRRDVPAGLLTYAEQRELEIGITIAGGASVIMLDEPTAGMSH 180 +P V +L + L P + Y +QR LEI + +A V++LDEP AG+ Sbjct: 121 MPGVMAEAGSLLGKLGLRDLAHRPVREIAYGQQRLLEIAVALALKPRVLLLDEPAAGVPQ 180 Query: 181 AETERAVALIRRLTEGRTLVIVEHDMSVVFGLADRISVLVYGHIIASGTPEEIRGNPKVK 240 ++T R + L + ++++EHDM +VF A R+ VL G +I G+P ++ +P+V+ Sbjct: 181 SDTGRIEQALADLPDDLAVLMIEHDMDLVFRFAKRVIVLAAGTVIFDGSPADVTKDPRVR 240 Query: 241 EAYLGEEID 249 EAYLG D Sbjct: 241 EAYLGSYAD 249 >BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 272 Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 91/236 (38%), Positives = 142/236 (60%) Query: 12 KSFGNVQIIRDLNLSVAKGERHAIIGPNGAGKSTTFNLISGHIKPTSGEIRLNGEVTSGL 71 KSFG +++++L V HA+IGPNGAGK+T FNL++ ++PTSGEI L GE + Sbjct: 35 KSFGGFHAVKNVDLDVEHARVHALIGPNGAGKTTVFNLLTKFLQPTSGEITLLGETITKT 94 Query: 72 RPFEINRRGLSRSFQVTNVFARMTVWENVRCAVLWATGHRYAFWKNVDNLPEVKQRTAQI 131 P + R+GL RSFQ++ F +TV ENV+ A+ G FW+++ L + + ++ Sbjct: 95 DPARVARKGLVRSFQISATFPHLTVLENVKVALQRPNGLATQFWRSLSALDWLDAQAVEL 154 Query: 132 LDDIHLSHRRDVPAGLLTYAEQRELEIGITIAGGASVIMLDEPTAGMSHAETERAVALIR 191 L+ + L+ R A L+Y +R LEI T+A V++LDEP AGM H + ALI Sbjct: 155 LERVGLADARHALAADLSYGRKRALEIATTLALDPKVLLLDEPLAGMGHEDVHTIAALIT 214 Query: 192 RLTEGRTLVIVEHDMSVVFGLADRISVLVYGHIIASGTPEEIRGNPKVKEAYLGEE 247 + + R +++VEH++ VV +A ++VL G I+ASG + + +V+ AY+G E Sbjct: 215 DVAKDRAVLMVEHNLKVVADIAHHVTVLQRGEILASGDYATVSKDERVRTAYMGTE 270