BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0272.p (245 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1350 [S] COG4312 Uncharacterized protein conserved in bacteria... 270 2e-72 AGc1560 [S] COG4312 Uncharacterized protein conserved in bacteri... 248 1e-65 RSc1113 [S] COG4312 Uncharacterized protein conserved in bacteri... 243 2e-64 mlr3755 Non COG 230 2e-60 mll1876 Non COG 220 2e-57 >PA1350 [S] COG4312 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 249 Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 128/245 (52%), Positives = 170/245 (69%), Gaps = 4/245 (1%) Query: 1 MQQHNIVSREEWIAARKALMIGEKELTQAREALSRQRRELPWVKVDKDYVFDGPGGKMTL 60 +Q H + SRE+W+ AR+ L+ EK+LT+ R+ ++ +RRELPWV+VDKDY F G G+ +L Sbjct: 5 LQDHPVSSREQWLDARRRLLAREKQLTRLRDQVAAERRELPWVRVDKDYRFQGERGERSL 64 Query: 61 GDLFKGRPQLVVQHVMFAPEWDAACKSCSFWADGFERMVPHLAARDTTMIAVSRAPLAKL 120 +LF G QL+V H MFAP W C CSF AD + HLA D +++AVSRAPL + Sbjct: 65 AELFGGNSQLIVYHFMFAPGWSEGCVGCSFLADHIDGANRHLAHHDVSLVAVSRAPLEEF 124 Query: 121 DAFKARMGWTFDWVSSGESDFNYDYGVSFTQAQIDAGTAKYNYGTTPLYGPELPGISVFC 180 AF+ RMGW FDW SS SDFN D+GVSF +AQ+ AG+ YNY TP G E+PG SVF Sbjct: 125 QAFRRRMGWRFDWYSSYGSDFNRDFGVSFDKAQLAAGSVDYNYQPTPDAGEEMPGASVFL 184 Query: 181 RDEQGSVFHTYSTFARGLDMMNAAYHYLDLTPLGRHEEGLPYPMDWVRLRDQYQPAPVQA 240 R+ G VFHTYS +ARGLD++ Y +LDLTP GR+E+ + MDW+R D+Y AP ++ Sbjct: 185 RNPAGEVFHTYSAYARGLDILLTTYTFLDLTPKGRNEDAI---MDWLRHHDRYDEAP-KS 240 Query: 241 SCCHS 245 +CCH+ Sbjct: 241 ACCHA 245 >AGc1560 [S] COG4312 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 303 Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 120/246 (48%), Positives = 158/246 (64%), Gaps = 5/246 (2%) Query: 1 MQQHNIVSREEWIAARKALMIGEKELTQAREALSRQRRELPWVKVDKDYVFDGPGGKMTL 60 + H +VS+EEW+AAR+ L++ EKELT+AR+ L+ RR LPW +V KDY+FD P G +L Sbjct: 61 IMSHPVVSKEEWLAARRDLLVKEKELTRARDRLNEARRALPWEEVTKDYIFDAPSGPRSL 120 Query: 61 GDLFKGRPQLVVQHVMFAPEWDAACKSCSFWADGFERMVPHLAARDTTMIAVSRAPLAKL 120 +LF QL+V H M AP+W+ C CSF+AD + + HL D +AVSRAPL K+ Sbjct: 121 QELFGDCSQLIVYHFMLAPDWEEGCVGCSFFADHVDGALVHLRHGDAGFVAVSRAPLEKI 180 Query: 121 DAFKARMGWTFDWVSSGESDFNYDYGVSFTQAQIDAGTAKYNYGTTPLYG--PELPGISV 178 + +K RMGW F WVS+ SDFNYDY SF ++ G YNY +G +L GISV Sbjct: 181 EGYKNRMGWKFPWVSAEGSDFNYDYQASFRDEDVEKGEITYNYRDMAPFGDLKDLHGISV 240 Query: 179 FCRDEQGSVFHTYSTFARGLDMMNAAYHYLDLTPLGRHEEGLPYPMDWVRLRDQYQPAPV 238 F + E G ++HTYST+ARG + LDL P GR+E+ + MDWVR DQY+ AP Sbjct: 241 FAKGEDGKIYHTYSTYARGAEQTLGTLMLLDLVPKGRNEDEV---MDWVRRHDQYEDAPK 297 Query: 239 QASCCH 244 ASCCH Sbjct: 298 AASCCH 303 >RSc1113 [S] COG4312 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 244 Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 120/244 (49%), Positives = 156/244 (63%), Gaps = 5/244 (2%) Query: 1 MQQHNIVSREEWIAARKALMIGEKELTQAREALSRQRRELPWVKVDKDYVFDGPGGKMTL 60 MQQH +VSREEW+ R+AL+ EKE R+A++ +R LPWVKVD YVFD GK TL Sbjct: 1 MQQHPVVSREEWLVKRRALLAREKEAIHQRDAITAERLALPWVKVDTRYVFDTASGKKTL 60 Query: 61 GDLFKGRPQLVVQHVMFAPEWDAACKSCSFWADGFERMVPHLAARDTTMIAVSRAPLAKL 120 DLF GR QL++ H M P W A C CS AD + HL D T+IAVSRAPL ++ Sbjct: 61 ADLFDGRSQLMIYHFMLGPGWAAGCPGCSLVADHLGGTLAHLNHHDVTLIAVSRAPLPEI 120 Query: 121 DAFKARMGWTFDWVSSGESDFNYDYGVSFTQAQIDAGTAKYNYGTT--PLYGPELPGISV 178 +A++ RMGW F W SS + FN+D+ VSFT ++ +G YNY +T ELPG+S Sbjct: 121 EAYRQRMGWQFPWASSFGTTFNHDFRVSFTPDELASGAVDYNYTSTQSAQANDELPGLSA 180 Query: 179 FCRDEQGSVFHTYSTFARGLDMMNAAYHYLDLTPLGRHEEGLPYPMDWVRLRDQYQPAPV 238 F +DE G+V+HTYST+ARGL+ + + LD P GR+E G PM+WVR D+Y AP Sbjct: 181 FYKDEAGNVYHTYSTYARGLEDLIGTFLILDRAPKGRNESG---PMEWVRRHDEYGDAPK 237 Query: 239 QASC 242 +C Sbjct: 238 ANAC 241 >mlr3755 Non COG Length = 264 Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 118/245 (48%), Positives = 154/245 (62%), Gaps = 3/245 (1%) Query: 1 MQQHNIVSREEWIAARKALMIGEKELTQAREALSRQRRELPWVKVDKDYVFDGPGGKMTL 60 M ++ +VSRE+W A KA + EKELT+ RE ++ +RRELPW+KV KDYVF+ G L Sbjct: 20 MHRNKVVSREDWFQAHKAHLAREKELTRLRERVAAERRELPWLKVRKDYVFETEQGPKKL 79 Query: 61 GDLFKGRPQLVVQHVMFAPEWDAACKSCSFWADGFERMVPHLAARDTTMIAVSRAPLAKL 120 +LF R QL+V H +FAP C+SC+F AD + HL D +++ +SRAPL +L Sbjct: 80 AELFANRSQLIVYHFVFAPGSTHHCESCAFVADHMDGANRHLRHHDVSLVTISRAPLVEL 139 Query: 121 DAFKARMGWTFDWVSSGESDFNYDYGVSFTQAQIDAGTAKYNYGTTPLYGPELPGISVFC 180 +K RMGWTFDWVSS SDFN+D VSFT QI +G A YN+ T L +LPG +VF Sbjct: 140 LPYKQRMGWTFDWVSSYASDFNFDMQVSFTDRQIASGEAVYNFETPVLTSKDLPGTTVFY 199 Query: 181 RDEQGSVFHTYSTFARGLDMMNAAYHYLDLTPLGRHEEGLPYP--MDWVRLRDQYQPAPV 238 + E G +F T+ + ARG + AY YLD+ P GR E G PY MDWVRL D+Y Sbjct: 200 KGETGDIFLTFMSRARGSEQFIGAYQYLDIAPKGRDETG-PYGTFMDWVRLHDEYGNRSQ 258 Query: 239 QASCC 243 + C Sbjct: 259 RDDVC 263 >mll1876 Non COG Length = 237 Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 104/234 (44%), Positives = 145/234 (61%), Gaps = 1/234 (0%) Query: 1 MQQHNIVSREEWIAARKALMIGEKELTQAREALSRQRRELPWVKVDKDYVFDGPGGKMTL 60 M H I +W A K+ ++ EK LT+ R+ L+ +RR LPW+++DK Y FD G+ +L Sbjct: 1 MTDHIIAPYSDWFEAHKSHLVKEKALTRQRQQLAAERRALPWLRIDKPYAFDTTQGRKSL 60 Query: 61 GDLFKGRPQLVVQHVMFAPEWDAACKSCSFWADGFERMVPHLAARDTTMIAVSRAPLAKL 120 DLF+GR QL++ H MF P D C CSF D + HL D +++ +RAPLA+L Sbjct: 61 ADLFEGRSQLIIYHFMFPPNADYRCTGCSFLCDHIDAANQHLRHHDVSLVVCARAPLAEL 120 Query: 121 DAFKARMGWTFDWVSSGESDFNYDYGVSFTQAQIDAGTAKYNYGTTPLYGPELPGISVFC 180 FKARM W FDWVSS SDFN+D+ VSFT+ QI +G +N+ + G + G +VF Sbjct: 121 MDFKARMNWQFDWVSSFGSDFNFDFQVSFTEDQISSGQVLFNFEEVAMTGRDRGGTTVFY 180 Query: 181 RDEQGSVFHTYSTFARGLDMMNAAYHYLDLTPLGRHEEGLPYPM-DWVRLRDQY 233 RD+ G ++ T+ RG + + Y YLDLTP+GR+E G + + DWVRL DQY Sbjct: 181 RDDDGQIYCTFQVRGRGGENLIGTYSYLDLTPIGRNENGPSHTLGDWVRLHDQY 234