BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0271.p         (118 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc01560 [S] COG5507 Uncharacterized conserved protein Sme Sinor...   136   1e-32
mlr2642 Non COG                                                       132   2e-31
ybaA [S] COG5507 Uncharacterized conserved protein Eco Escherich...   118   3e-27
ZybaA [S] COG5507 Uncharacterized conserved protein EcZ Escheric...   118   3e-27
ECs0509 [S] COG5507 Uncharacterized conserved protein Ecs Escher...   118   3e-27

>SMc01560 [S] COG5507 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 117

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 87/118 (73%), Gaps = 1/118 (0%)

Query: 1   MPYVDGFIVAVPKKKLKAYAQLSKKAGKVWREYGALDYREWVADDVKPGKLTSFPQSVKL 60
           M YVDGF+VAVP   ++AY +L+  AG VW+E+GAL+Y E +ADDV  G+LTSFP++V+ 
Sbjct: 1   MAYVDGFLVAVPTANIEAYKKLASAAGAVWKEHGALNYVECLADDVPYGELTSFPRAVQA 60

Query: 61  KAGETVVFAWITYKSRAQRDRINAKVMADPRLASMGTGDVPFDGKRMIYGGFASLVKV 118
           K  ETVVF+WI Y+SR  RD I AKVMADPRL       + FDGKRMIYGGF   +++
Sbjct: 61  KDDETVVFSWIVYRSRQDRDAIVAKVMADPRLQGDEWKSI-FDGKRMIYGGFEPFLEL 117


>mlr2642 Non COG
          Length = 123

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 83/118 (70%), Gaps = 1/118 (0%)

Query: 1   MPYVDGFIVAVPKKKLKAYAQLSKKAGKVWREYGALDYREWVADDVKPGKLTSFPQSVKL 60
           M YVDGF++AVPK KL  Y +L+  AG +W E+GAL Y E + DDV  G+LTSFP++V+ 
Sbjct: 1   MSYVDGFVLAVPKAKLDDYKKLANLAGPIWMEHGALAYVECIGDDVPYGELTSFPRAVQA 60

Query: 61  KAGETVVFAWITYKSRAQRDRINAKVMADPRLASMGTGDVPFDGKRMIYGGFASLVKV 118
           K  E VVFAW  Y+SR  RD + AKVMADPRL     G +PFD KRMI+GGF   +++
Sbjct: 61  KDDEIVVFAWAVYESRQSRDAVMAKVMADPRLTP-DLGPMPFDMKRMIFGGFQPFIEL 117


>ybaA [S] COG5507 Uncharacterized conserved protein Eco Escherichia coli
           K12
          Length = 117

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 78/116 (67%), Gaps = 1/116 (0%)

Query: 1   MPYVDGFIVAVPKKKLKAYAQLSKKAGKVWREYGALDYREWVADDVKPGKLTSFPQSVKL 60
           M YVDGF+VAVP  K  AY +++ KA  +++E+GAL   E  A DV  GK+T F  +VK 
Sbjct: 1   MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60

Query: 61  KAGETVVFAWITYKSRAQRDRINAKVMADPRLASMGTGDVPFDGKRMIYGGFASLV 116
           +  E VVF+WI Y S+  RD  N K+M+DPR+   G   +PFDGKRMIYGGF S++
Sbjct: 61  EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGES-MPFDGKRMIYGGFESII 115


>ZybaA [S] COG5507 Uncharacterized conserved protein EcZ Escherichia coli
           O157:H7 EDL933
          Length = 117

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 78/116 (67%), Gaps = 1/116 (0%)

Query: 1   MPYVDGFIVAVPKKKLKAYAQLSKKAGKVWREYGALDYREWVADDVKPGKLTSFPQSVKL 60
           M YVDGF+VAVP  K  AY +++ KA  +++E+GAL   E  A DV  GK+T F  +VK 
Sbjct: 1   MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60

Query: 61  KAGETVVFAWITYKSRAQRDRINAKVMADPRLASMGTGDVPFDGKRMIYGGFASLV 116
           +  E VVF+WI Y S+  RD  N K+M+DPR+   G   +PFDGKRMIYGGF S++
Sbjct: 61  EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGES-MPFDGKRMIYGGFESII 115


>ECs0509 [S] COG5507 Uncharacterized conserved protein Ecs Escherichia coli
           O157:H7
          Length = 117

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 78/116 (67%), Gaps = 1/116 (0%)

Query: 1   MPYVDGFIVAVPKKKLKAYAQLSKKAGKVWREYGALDYREWVADDVKPGKLTSFPQSVKL 60
           M YVDGF+VAVP  K  AY +++ KA  +++E+GAL   E  A DV  GK+T F  +VK 
Sbjct: 1   MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA 60

Query: 61  KAGETVVFAWITYKSRAQRDRINAKVMADPRLASMGTGDVPFDGKRMIYGGFASLV 116
           +  E VVF+WI Y S+  RD  N K+M+DPR+   G   +PFDGKRMIYGGF S++
Sbjct: 61  EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGES-MPFDGKRMIYGGFESII 115