BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0194.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI1786 [GT] COG1762 Phosphotransferase system mannitol/fructos...   199   3e-51
AGc576 [GT] COG1762 Phosphotransferase system mannitol/fructose-...   196   2e-50
SMc01141 [GT] COG1762 Phosphotransferase system mannitol/fructos...   192   2e-49
mll3194 [GT] COG1762 Phosphotransferase system mannitol/fructose...   190   9e-49
VC2531 [GT] COG1762 Phosphotransferase system mannitol/fructose-...   121   7e-28

>BMEI1786 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific
           IIA domain (Ntr-type) Bme Brucella melitensis
          Length = 154

 Score =  199 bits (505), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 99/153 (64%), Positives = 119/153 (77%)

Query: 1   MPITDLVAPEAILPALKVISKKQALQELAARASALTGQNERAIFEVLLQREKLGTTAVGY 60
           M ++DL+ P AI+PALK  SKKQ LQ L+ +A+ LTG  ER +FE +LQRE+LG+T VG 
Sbjct: 1   MDLSDLIQPGAIIPALKASSKKQLLQILSEKAAELTGLPEREVFETVLQRERLGSTGVGN 60

Query: 61  GVAIPHGKLPKLEKLFGFFARLERPIDFEAMDGQPVDLIFLLLAPEGAGADHLKALARIA 120
           GVAIPHGKL  + K+ G FARLE P+DFEA+D QPVDL+FLLLAPE AGADHLKAL+RIA
Sbjct: 61  GVAIPHGKLASINKIAGIFARLETPVDFEALDDQPVDLVFLLLAPENAGADHLKALSRIA 120

Query: 121 RLLRDQDVAKKLRASRDAQAIYSVLALPPASAA 153
           RLLRD D+  KLR + DAQA+YS L   P S A
Sbjct: 121 RLLRDPDMVAKLRGTHDAQALYSFLTAHPTSNA 153


>AGc576 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific
           IIA domain (Ntr-type) Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 153

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/153 (63%), Positives = 123/153 (80%)

Query: 1   MPITDLVAPEAILPALKVISKKQALQELAARASALTGQNERAIFEVLLQREKLGTTAVGY 60
           M + DL+  +AI+PALKV SKKQ LQELAA+A+ +TG +ER +F+V+LQREKLG+T VG+
Sbjct: 1   MALADLLQQDAIIPALKVNSKKQLLQELAAKAARITGVSEREVFDVILQREKLGSTGVGH 60

Query: 61  GVAIPHGKLPKLEKLFGFFARLERPIDFEAMDGQPVDLIFLLLAPEGAGADHLKALARIA 120
           G+AIPHGKL  + ++ G FARLE P+DFEA+D QPVDL+FLLLAPEGAGADHLKAL+RIA
Sbjct: 61  GIAIPHGKLNSIHQITGVFARLETPVDFEALDDQPVDLVFLLLAPEGAGADHLKALSRIA 120

Query: 121 RLLRDQDVAKKLRASRDAQAIYSVLALPPASAA 153
           R LRD ++  KLRA+    AIY+ L    A+AA
Sbjct: 121 RALRDPELVTKLRATDSDTAIYAFLNQEQATAA 153


>SMc01141 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific
           IIA domain (Ntr-type) Sme Sinorhizobium meliloti
          Length = 154

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/153 (62%), Positives = 119/153 (77%)

Query: 1   MPITDLVAPEAILPALKVISKKQALQELAARASALTGQNERAIFEVLLQREKLGTTAVGY 60
           M +  L+   AI+PA++  SKKQ LQELAA+AS LTG  ER IF+V+LQRE+LG+T VG 
Sbjct: 1   MALAGLLHQNAIIPAMRANSKKQLLQELAAKASKLTGLPEREIFDVILQRERLGSTGVGN 60

Query: 61  GVAIPHGKLPKLEKLFGFFARLERPIDFEAMDGQPVDLIFLLLAPEGAGADHLKALARIA 120
           G+AIPHGKL  L  + G FARL+ P+DFEA+D QPVDL+FLLLAPEGAGADHLKAL+RIA
Sbjct: 61  GIAIPHGKLSNLPSIVGIFARLDAPVDFEALDDQPVDLVFLLLAPEGAGADHLKALSRIA 120

Query: 121 RLLRDQDVAKKLRASRDAQAIYSVLALPPASAA 153
           R+LRD D+  ++RAS  A AIY++L+    S A
Sbjct: 121 RVLRDHDMVSRIRASDSASAIYTLLSDDTTSHA 153


>mll3194 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific
           IIA domain (Ntr-type) Mlo Mesorhizobium loti
          Length = 154

 Score =  190 bits (483), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 93/153 (60%), Positives = 123/153 (80%)

Query: 1   MPITDLVAPEAILPALKVISKKQALQELAARASALTGQNERAIFEVLLQREKLGTTAVGY 60
           M ++DL++  AILPALK  SKKQ LQ L+ RA+A++G  ER +F+ +LQRE+LG+T VG 
Sbjct: 1   MDLSDLISVPAILPALKANSKKQLLQLLSERAAAISGIPEREVFDTILQRERLGSTGVGN 60

Query: 61  GVAIPHGKLPKLEKLFGFFARLERPIDFEAMDGQPVDLIFLLLAPEGAGADHLKALARIA 120
           G+AIPHGKL  ++++ G FARLE P+DFE++D QPVDL+FLLLAPEGAGADHLKAL+RIA
Sbjct: 61  GIAIPHGKLAGVKRIAGVFARLETPVDFESLDDQPVDLVFLLLAPEGAGADHLKALSRIA 120

Query: 121 RLLRDQDVAKKLRASRDAQAIYSVLALPPASAA 153
           R+LRD D   K+R +RDA AI+++L+   AS A
Sbjct: 121 RVLRDADTVAKIRGTRDATAIHALLSDTQASHA 153


>VC2531 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific
           IIA domain (Ntr-type) Vch Vibrio cholerae
          Length = 148

 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 93/145 (64%)

Query: 1   MPITDLVAPEAILPALKVISKKQALQELAARASALTGQNERAIFEVLLQREKLGTTAVGY 60
           M ++++++ +    A++  SKK+AL+ ++  A+  TGQN   +FE +L REK+G+T +G 
Sbjct: 1   MQLSEVLSLDCTKSAVQCSSKKRALEIISEIAALHTGQNATELFECMLSREKMGSTGIGN 60

Query: 61  GVAIPHGKLPKLEKLFGFFARLERPIDFEAMDGQPVDLIFLLLAPEGAGADHLKALARIA 120
           G+AIPH ++   E       + E PI+F+++D +PVDL+F LL PE    +HLK LA +A
Sbjct: 61  GIAIPHARMSDSENAVAVLLQCEEPIEFDSIDNRPVDLLFALLVPEDQCKEHLKTLACMA 120

Query: 121 RLLRDQDVAKKLRASRDAQAIYSVL 145
             L D+ + K+LR +   Q +Y+++
Sbjct: 121 ERLNDKQILKQLRNAASDQELYNIM 145