BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0182.p (414 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1264 [G] COG1653 ABC-type sugar transport system, periplasmic... 467 e-131 SMb20416 [G] COG1653 ABC-type sugar transport system, periplasmi... 433 e-121 BMEII0625 [G] COG1653 ABC-type sugar transport system, periplasm... 428 e-119 ugpB [G] COG1653 ABC-type sugar transport system, periplasmic co... 424 e-118 ZugpB [G] COG1653 ABC-type sugar transport system, periplasmic c... 424 e-118 >RSc1264 [G] COG1653 ABC-type sugar transport system, periplasmic component Rso Ralstonia solanacearum Length = 438 Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust. Identities = 224/413 (54%), Positives = 300/413 (72%), Gaps = 4/413 (0%) Query: 1 VTEIQWWHAMTGANNDVIVKLANDFNASQSDYKVIPTYKGGYADTMNAGIAAFRAGNAPH 60 VTEIQWWH+M GA ND + +LAN FNASQ DYKV+P YKG Y +++ AGIAAFRAGNAP Sbjct: 25 VTEIQWWHSMEGALNDKVNELANKFNASQPDYKVVPVYKGQYDESLAAGIAAFRAGNAPA 84 Query: 61 IMQVFEVGTATMMAATGAVKPVYKLMADAGEKFDPSVYLPAITGYYSTSKGEMLSFPFNS 120 I+QVFEVGTATMM A GA+ P+ K+M DAGEKFDP Y+PA+ GYY+++KG+MLSFPFNS Sbjct: 85 ILQVFEVGTATMMNARGAIVPIAKVMKDAGEKFDPKAYVPAVAGYYTSNKGDMLSFPFNS 144 Query: 121 SSTVMWVNLDALKKANI--AEIPKTWPQVFDDAKKLKAAGYATCGFSGSWVTWVNLEQLS 178 S+T+++ N DA KKA + + P TW +V DA KLKAAG+A CG++ W +WV+LE S Sbjct: 145 STTILYYNKDAFKKAGLDPNKPPATWQEVAIDAAKLKAAGFA-CGYTTDWQSWVHLESFS 203 Query: 179 AWHNVPLASKANGLDGFDTVLEFNGPLQVKHLENLVELQKDKTYDYAGRTNTGEGRFTSG 238 AWHNV A++ NG G L FNGP+QV+H+E+L++++K + YAGR + + +F +G Sbjct: 204 AWHNVAFATENNGFGGAKARLIFNGPVQVQHIEHLLDMEKKGYFTYAGRKDEPKAKFIAG 263 Query: 239 ECPIYLTSSAFFGNVKAQAKFNFTAAPMPYYPDAKGAPQNSIIGGASLWVMGGKSAEEYK 298 EC ++ SSA N++ A+F+F+ AP+PY GAPQN+IIGGASLWVMGG EEYK Sbjct: 264 ECAMHTGSSAALANIRKNARFSFSPAPLPYEAGVPGAPQNTIIGGASLWVMGGHKPEEYK 323 Query: 299 GVAKFLTFLSDTDRQIWIHKASGYLPITKAAYAKAKEEGFYKDQPYLETPLLELTNKEPT 358 GVA+F +FLS + Q H+++GYLP+T AY ++ GFY P + + ++ + T Sbjct: 324 GVARFFSFLSRPEIQSDWHQSTGYLPVTMQAYELTRQSGFYDKNPGADVAVKQMIVRT-T 382 Query: 359 ANSRGLRLGNMVQLRDMWSEEIEQALAGKKTAKQALDAAVERGNQMLRQFEKT 411 SRG+RLGN Q+R + EE+E AGKK+ K+ALD+AV RGN +L +FEKT Sbjct: 383 DKSRGIRLGNFPQIRSVIDEELEAVWAGKKSPKEALDSAVARGNDLLARFEKT 435 >SMb20416 [G] COG1653 ABC-type sugar transport system, periplasmic component Sme Sinorhizobium meliloti Length = 430 Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/403 (51%), Positives = 279/403 (69%), Gaps = 5/403 (1%) Query: 2 TEIQWWHAMTGANNDVIVKLANDFNASQSDYKVIPTYKGGYADTMNAGIAAFRAGNAPHI 61 TE+QWWHAMTGANN++I +L +FN SQS YKV+P +KG Y +T+NAGIAAFR+ P I Sbjct: 22 TELQWWHAMTGANNEMIEELTKEFNESQSTYKVVPVFKGTYPETLNAGIAAFRSKQPPAI 81 Query: 62 MQVFEVGTATMMAATGAVKPVYKLMADAGEKFDPSVYLPAITGYYSTSKGEMLSFPFNSS 121 +QVF+ G+ TMMAA GA+ P +++ G FD S YLP I YYS G MLSFP+NSS Sbjct: 82 IQVFDAGSGTMMAAEGAIVPAAEILQKGGFTFDKSQYLPGIVAYYSKPDGTMLSFPYNSS 141 Query: 122 STVMWVNLDALKKA--NIAEIPKTWPQVFDDAKKLKAAGYATCGFSGSWVTWVNLEQLSA 179 S +++ N DA +KA N+ PKTWP+VF+ AKK+K +G A CG + +W+TW+ E +A Sbjct: 142 SPILYYNKDAFQKAGLNVDNPPKTWPEVFEAAKKIKTSGAAPCGMTSTWLTWIQTENFAA 201 Query: 180 WHNVPLASKANGLDGFDTVLEFNGPLQVKHLENLVELQKDKTYDYAGRTNTGEGRFTSGE 239 W+NVP + NGL G D L+ N PL V+H + + +L KD + Y GRT+ + FTSGE Sbjct: 202 WNNVPYGTNENGLGGTDVKLQINAPLYVEHFQAIADLAKDGAFRYGGRTSEAKQLFTSGE 261 Query: 240 CPIYLTSSAFFGNVKAQAKFNFTAAPMPYYPDAKGAPQNSIIGGASLWVMGGKSAEEYKG 299 C I SS G++ A++ N+ +PYY + G PQN+I GGASLWV GKS EEYKG Sbjct: 262 CAILTESSGGLGDI-AKSGVNYGIGQLPYY-EGHG-PQNTIPGGASLWVFAGKSDEEYKG 318 Query: 300 VAKFLTFLSDTDRQIWIHKASGYLPITKAAYAKAKEEGFYKDQPYLETPLLELTNKEPTA 359 VA+F FLS T+ Q +H+ SGY+P+T AAY + K+ GFY+ P ETPLL++ K PT Sbjct: 319 VAEFFNFLSQTEIQAKLHQVSGYMPVTMAAYEETKKSGFYEKNPGRETPLLQMMGKAPTE 378 Query: 360 NSRGLRLGNMVQLRDMWSEEIEQALAGKKTAKQALDAAVERGN 402 NS+G+RL N+ Q+RD+ +EE E L+G++ AK ALD AVERGN Sbjct: 379 NSKGVRLVNLPQVRDILNEEFEAMLSGQQDAKTALDKAVERGN 421 >BMEII0625 [G] COG1653 ABC-type sugar transport system, periplasmic component Bme Brucella melitensis Length = 444 Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust. Identities = 204/403 (50%), Positives = 279/403 (69%), Gaps = 5/403 (1%) Query: 2 TEIQWWHAMTGANNDVIVKLANDFNASQSDYKVIPTYKGGYADTMNAGIAAFRAGNAPHI 61 TE+ WWH MTGANN+++ +L+ +FN SQS+YK++P YKG Y +T+NAGIAAFR+ P I Sbjct: 38 TELAWWHGMTGANNEMVNELSKEFNESQSEYKIVPVYKGNYPETLNAGIAAFRSKQPPAI 97 Query: 62 MQVFEVGTATMMAATGAVKPVYKLMADAGEKFDPSVYLPAITGYYSTSKGEMLSFPFNSS 121 +QVF+ G+ MMAA GA+ P +++ G KFD S YLP I YYS G MLSFP+NSS Sbjct: 98 LQVFDAGSGVMMAAEGAIVPAAEVLEKGGYKFDKSQYLPGIVAYYSKPDGTMLSFPYNSS 157 Query: 122 STVMWVNLDALKKANIAE--IPKTWPQVFDDAKKLKAAGYATCGFSGSWVTWVNLEQLSA 179 S +++ N DA KKA + E PKTWP+VF+ AKK+KA+G + CGF+ +W+TW+ E +A Sbjct: 158 SPILYYNKDAFKKAGLDENKPPKTWPEVFEAAKKIKASGASPCGFTSTWLTWIQTENFAA 217 Query: 180 WHNVPLASKANGLDGFDTVLEFNGPLQVKHLENLVELQKDKTYDYAGRTNTGEGRFTSGE 239 W+NVP + NGL G D LE N PL V+H + + +L KD T+ Y GRT+ + FTSGE Sbjct: 218 WNNVPYGTNENGLAGTDVKLEINSPLYVEHFQAIADLAKDGTFRYGGRTSEAKQLFTSGE 277 Query: 240 CPIYLTSSAFFGNVKAQAKFNFTAAPMPYYPDAKGAPQNSIIGGASLWVMGGKSAEEYKG 299 C + SS G+V ++ N+ +PYY + G PQN+I GGASLWV G S ++YKG Sbjct: 278 CAMLTESSGGLGDV-VKSGINYGIGQLPYY-EGHG-PQNTIPGGASLWVFAGLSDDQYKG 334 Query: 300 VAKFLTFLSDTDRQIWIHKASGYLPITKAAYAKAKEEGFYKDQPYLETPLLELTNKEPTA 359 +A+F FLS + Q+ +H+ SGYLP+T AAY + K+ FY+ P ETP+L++ KEPT Sbjct: 335 IAEFFNFLSQSKIQVKLHEKSGYLPVTLAAYEETKKSDFYEKNPGRETPILQMMGKEPTE 394 Query: 360 NSRGLRLGNMVQLRDMWSEEIEQALAGKKTAKQALDAAVERGN 402 NS+G+RL N+ Q+RD+ +EE E L GK+ AK ALD AV+RGN Sbjct: 395 NSKGVRLVNLPQVRDILNEEFEAMLGGKQDAKTALDNAVKRGN 437 >ugpB [G] COG1653 ABC-type sugar transport system, periplasmic component Eco Escherichia coli K12 Length = 438 Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/414 (51%), Positives = 277/414 (66%), Gaps = 5/414 (1%) Query: 1 VTEIQWWHAMTGANNDVIVKLANDFNASQSDYKVIPTYKGGYADTMNAGIAAFRAGNAPH 60 VT I +WH+M G + LA FNA DYK++PTYKG Y ++AGIAAFR GNAP Sbjct: 24 VTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPA 83 Query: 61 IMQVFEVGTATMMAATGAVKPVYKLMADAGEKFDPSVYLPAITGYYSTSK-GEMLSFPFN 119 I+QV+EVGTATMMA+ A+KPVY + +AG +FD S ++P ++GYYS SK G +LS PFN Sbjct: 84 ILQVYEVGTATMMASK-AIKPVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFN 142 Query: 120 SSSTVMWVNLDALKKANI--AEIPKTWPQVFDDAKKLKAAGYATCGFSGSWVTWVNLEQL 177 SS+ V++ N DA KKA + + PKTW + D A KLKA+G CG++ W W+ LE Sbjct: 143 SSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASG-MKCGYASGWQGWIQLENF 201 Query: 178 SAWHNVPLASKANGLDGFDTVLEFNGPLQVKHLENLVELQKDKTYDYAGRTNTGEGRFTS 237 SAW+ +P ASK NG DG D VLEFN P QVKH+ L E+ K + Y GR + +F + Sbjct: 202 SAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYN 261 Query: 238 GECPIYLTSSAFFGNVKAQAKFNFTAAPMPYYPDAKGAPQNSIIGGASLWVMGGKSAEEY 297 G+C + SS N++ AKFN+ MPY DAK APQN+IIGGASLWVM GK E Y Sbjct: 262 GDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETY 321 Query: 298 KGVAKFLTFLSDTDRQIWIHKASGYLPITKAAYAKAKEEGFYKDQPYLETPLLELTNKEP 357 GVAKFL FL+ + H+ +GYLPITKAAY +E+GFY+ P +T ++ NK P Sbjct: 322 TGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPP 381 Query: 358 TANSRGLRLGNMVQLRDMWSEEIEQALAGKKTAKQALDAAVERGNQMLRQFEKT 411 ++GLRLGNM Q+R + EE+E GKKT +QALD AVERGNQ+LR+FEK+ Sbjct: 382 LPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKS 435 >ZugpB [G] COG1653 ABC-type sugar transport system, periplasmic component EcZ Escherichia coli O157:H7 EDL933 Length = 438 Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/414 (51%), Positives = 277/414 (66%), Gaps = 5/414 (1%) Query: 1 VTEIQWWHAMTGANNDVIVKLANDFNASQSDYKVIPTYKGGYADTMNAGIAAFRAGNAPH 60 VT I +WH+M G + LA FNA DYK++PTYKG Y ++AGIAAFR GNAP Sbjct: 24 VTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPA 83 Query: 61 IMQVFEVGTATMMAATGAVKPVYKLMADAGEKFDPSVYLPAITGYYSTSK-GEMLSFPFN 119 I+QV+EVGTATMMA+ A+KPVY + +AG +FD S ++P ++GYYS SK G +LS PFN Sbjct: 84 ILQVYEVGTATMMASK-AIKPVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFN 142 Query: 120 SSSTVMWVNLDALKKANI--AEIPKTWPQVFDDAKKLKAAGYATCGFSGSWVTWVNLEQL 177 SS+ V++ N DA KKA + + PKTW + D A KLKA+G CG++ W W+ LE Sbjct: 143 SSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASG-MKCGYASGWQGWIQLENF 201 Query: 178 SAWHNVPLASKANGLDGFDTVLEFNGPLQVKHLENLVELQKDKTYDYAGRTNTGEGRFTS 237 SAW+ +P ASK NG DG D VLEFN P QVKH+ L E+ K + Y GR + +F + Sbjct: 202 SAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYN 261 Query: 238 GECPIYLTSSAFFGNVKAQAKFNFTAAPMPYYPDAKGAPQNSIIGGASLWVMGGKSAEEY 297 G+C + SS N++ AKFN+ MPY DAK APQN+IIGGASLWVM GK E Y Sbjct: 262 GDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETY 321 Query: 298 KGVAKFLTFLSDTDRQIWIHKASGYLPITKAAYAKAKEEGFYKDQPYLETPLLELTNKEP 357 GVAKFL FL+ + H+ +GYLPITKAAY +E+GFY+ P +T ++ NK P Sbjct: 322 TGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPP 381 Query: 358 TANSRGLRLGNMVQLRDMWSEEIEQALAGKKTAKQALDAAVERGNQMLRQFEKT 411 ++GLRLGNM Q+R + EE+E GKKT +QALD AVERGNQ+LR+FEK+ Sbjct: 382 LPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKS 435