BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0179.p         (168 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1107 [O] COG1764 Predicted redox protein, regulator of disulf...   189   3e-48
BMEII0409 [O] COG1764 Predicted redox protein, regulator of disu...   176   3e-44
PA2850 [O] COG1764 Predicted redox protein, regulator of disulfi...   169   4e-42
SMc00040 [O] COG1764 Predicted redox protein, regulator of disul...   168   4e-42
AGc1547 [O] COG1764 Predicted redox protein, regulator of disulf...   164   8e-41

>RSp1107 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Rso Ralstonia solanacearum
          Length = 141

 Score =  189 bits (480), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 115/142 (80%), Gaps = 2/142 (1%)

Query: 28  MSVN-VLYKTSAKATGGRDGHAATLDGALDVKLTTPKELGGGGGAGNNPEQLFAAGYAAC 86
           MS+  +LY+  A ATGGRDG AAT DG LDV+L TP+ELGG GG G NPEQLFAAGY+AC
Sbjct: 1   MSIETILYRAHANATGGRDGRAATDDGRLDVRLATPRELGGAGGEGTNPEQLFAAGYSAC 60

Query: 87  FIGAMKFVASQGGPKVPADASVTSTVGIGPRSEGGFGLAVELAVSLPGLARNDAEALVEK 146
           F+GAMKFVA++   ++PAD SV  +VGIG     GFG+ V+LA+SLPG+ R +A+AL+E+
Sbjct: 61  FLGAMKFVAARDKLRLPADTSVQGSVGIGA-IPNGFGIEVDLAISLPGMDRAEAQALIER 119

Query: 147 AHQVCPYSNATRGNVDVKLSVV 168
           AH VCPYSNATRGN+DV+LS+V
Sbjct: 120 AHIVCPYSNATRGNIDVRLSLV 141


>BMEII0409 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Bme Brucella melitensis
          Length = 149

 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 86/141 (60%), Positives = 111/141 (78%), Gaps = 1/141 (0%)

Query: 28  MSVNVLYKTSAKATGGRDGHAATLDGALDVKLTTPKELGGGGGAGNNPEQLFAAGYAACF 87
           +++ +LY T + ATGGR G A T DG L V L TPKELGG GG G NPEQLFA+GYAACF
Sbjct: 8   IAMPILYTTQSTATGGRTGSAKTADGRLSVVLDTPKELGGQGGEGTNPEQLFASGYAACF 67

Query: 88  IGAMKFVASQGGPKVPADASVTSTVGIGPRSEG-GFGLAVELAVSLPGLARNDAEALVEK 146
           +GA+KF A++    +PA+++VT+TVGIGPR +G GFGL V L+++LPG+ +  AE LV+ 
Sbjct: 68  LGALKFAAAKEKISIPAESTVTATVGIGPREDGTGFGLDVALSIALPGIDKAKAEELVQA 127

Query: 147 AHQVCPYSNATRGNVDVKLSV 167
           AH VCPYS+ATRGN+DV+LSV
Sbjct: 128 AHIVCPYSHATRGNLDVRLSV 148


>PA2850 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Pae Pseudomonas aeruginosa
          Length = 142

 Score =  169 bits (427), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/140 (67%), Positives = 110/140 (78%), Gaps = 1/140 (0%)

Query: 28  MSVNVLYKTSAKATGGRDGHAATLDGALDVKLTTPKELGGGGGAGNNPEQLFAAGYAACF 87
            ++  LY  +A ATGGRDG A + DG LDVKL+TP+ELGG GGA  NPEQLFAAGY+ACF
Sbjct: 2   QTIKALYTATATATGGRDGRAVSSDGVLDVKLSTPRELGGQGGAATNPEQLFAAGYSACF 61

Query: 88  IGAMKFVASQGGPKVPADASVTSTVGIGPRSEGGFGLAVELAVSLPGLARNDAEALVEKA 147
           IGA+KFVA Q    +PADAS+T  VGIG +  GGFGL VEL ++LPGL R  AEALV  A
Sbjct: 62  IGALKFVAGQRKQTLPADASITGKVGIG-QIPGGFGLEVELHINLPGLEREAAEALVAAA 120

Query: 148 HQVCPYSNATRGNVDVKLSV 167
           HQVCPYSNATRGN+DV+L+V
Sbjct: 121 HQVCPYSNATRGNIDVRLNV 140


>SMc00040 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Sme Sinorhizobium meliloti
          Length = 140

 Score =  168 bits (426), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 85/137 (62%), Positives = 103/137 (75%), Gaps = 1/137 (0%)

Query: 32  VLYKTSAKATGGRDGHAATLDGALDVKLTTPKELGGGGGAGNNPEQLFAAGYAACFIGAM 91
           +LY+T+A ATGGR G A + DG LDV LT PKELGG G  G NPEQLFAAGY+ACF+GA+
Sbjct: 3   ILYRTTASATGGRAGQAKSKDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLGAL 62

Query: 92  KFVASQGGPKVPADASVTSTVGIGPRSEG-GFGLAVELAVSLPGLARNDAEALVEKAHQV 150
           KFVA +   K+  D +VT TVGIGPR +G GF +   L +S PG+ +   E LV+KAH V
Sbjct: 63  KFVAGKEKVKLAEDTTVTGTVGIGPRDDGTGFFIDAALEISSPGVEKAVLEDLVQKAHIV 122

Query: 151 CPYSNATRGNVDVKLSV 167
           CPYS+ATRGNVDVKL+V
Sbjct: 123 CPYSHATRGNVDVKLTV 139


>AGc1547 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Atu Agrobacterium tumefaciens strain C58
           (Cereon)
          Length = 140

 Score =  164 bits (415), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/137 (60%), Positives = 101/137 (73%), Gaps = 1/137 (0%)

Query: 32  VLYKTSAKATGGRDGHAATLDGALDVKLTTPKELGGGGGAGNNPEQLFAAGYAACFIGAM 91
           +LY T A ATGGR G+A + DG LDV LT PKELGG G  G NPEQLFAAGY+ACF+GA+
Sbjct: 3   ILYTTKASATGGRAGNAKSEDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLGAL 62

Query: 92  KFVASQGGPKVPADASVTSTVGIGPRSEG-GFGLAVELAVSLPGLARNDAEALVEKAHQV 150
           K VA +   K+P D +VT+TVGIGPR +G GFG+ V L V++PGL R  AE LV  AH V
Sbjct: 63  KAVAGKHKVKIPEDTTVTATVGIGPREDGTGFGIEVTLKVNIPGLEREKAEELVAAAHIV 122

Query: 151 CPYSNATRGNVDVKLSV 167
           CPYS+A R + +V +SV
Sbjct: 123 CPYSHAMRTSTEVPVSV 139