BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0159.p (755 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2063 [S] COG3673 Uncharacterized conserved protein Pae Pseudom... 123 2e-27 CC2696_1 Non COG 107 1e-22 mll2265 Non COG 105 5e-22 >PA2063 [S] COG3673 Uncharacterized conserved protein Pae Pseudomonas aeruginosa Length = 407 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 129/416 (31%), Positives = 185/416 (44%), Gaps = 86/416 (20%) Query: 5 KIIILSDGTGNAASSVWRTNVWRIFQSLDLQGNTQAAKYDDGVGT----------SKFIP 54 ++++ DGT N TNV R+++SL A YD GVGT KF P Sbjct: 24 QLVVCIDGTSNRFGDQ-PTNVVRLYRSLSRDPRRVLAYYDQGVGTFGLKETLFEWQKF-P 81 Query: 55 LAILGGAFGYGLKRNILDAYKFICRNYDHESDSKIYLFGFSRGAFTVRTLAALILDQGLI 114 I G AFG+GLKRN+ AY+F+ +Y +I+LFGFSRGA+ VR LAA++ GLI Sbjct: 82 SRIAGLAFGWGLKRNVEGAYRFLAEHY--RPGDQIFLFGFSRGAYAVRVLAAMLRAVGLI 139 Query: 115 VADTESELHDGA---VKAYRAYRAEGYHSIWRIEVPFRALRDYVLVRLWDRLRGNKPYAE 171 A + L D A + R E + R P D+ L+ + ++ G + Sbjct: 140 DA-HQPHLFDYAWTLLTTRMPPRDEDKRAGTRRRGP-----DFGLLGRFRKVFGRQ---- 189 Query: 172 ITRKPVPAIEFIGIWDTVAAYGLPIDEMTRGISNWVW-PLELPNRILSPKVKCARHALAL 230 + F+G++DTV + G WV+ PL +P + V R ALA+ Sbjct: 190 ------VKVHFLGLFDTVTSVG------------WVYDPLTVPYSSNNEMVDVVRQALAI 231 Query: 231 DDERTTFHPVLWTEQEPGQPAPAVPASIDGERLVQVWFVGMHANVGGGY--PDDAVAFVP 288 D+ R F LW ++ + ++QVWF GMH++VGGGY D +A V Sbjct: 232 DECRCFFRQNLWFGEKDRK-----------SDVLQVWFPGMHSDVGGGYAPKDSRLALVA 280 Query: 289 LAWLVDEAVKRGLDFKSAPVAD---------PDAIKSIKSSEDKDGRL--------YDSR 331 W++ EA++ GL A D PD I + RL +D R Sbjct: 281 FTWMLGEALEAGLHVDPARSRDQLRARSKQGPDPTAPILPVMTRPWRLAEWLPLLVWDRR 340 Query: 332 AGLGAYY--RYGPRKVADLCNDPYAGVSVPMP-KIHESVFERIDSGANAYAPIGLP 384 +G A+ R PR + P V K+H SV R+D + Y P LP Sbjct: 341 SGNRAWRWSRGRPR------SRPLEPVGQETRVKLHRSVQRRLDECPD-YRPCNLP 389 >CC2696_1 Non COG Length = 405 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 113/354 (31%), Positives = 161/354 (45%), Gaps = 25/354 (7%) Query: 5 KIIILSDGTGNAASSVWRTNVWRIFQSLDL---QGNTQAAKYDDGVGTSKFIPLAILGGA 61 +++ DGT N S+ TNV + S+ +G TQ YD+GVGT + L+ GG Sbjct: 32 RLVFCFDGTWNRLSADTPTNVVLLAASIQRASPKGVTQVIHYDEGVGTGRLEKLS--GGM 89 Query: 62 FGYGLKRNILDAYKFICRNYDHESDSKIYLFGFSRGAFTVRTLAALILDQGLIVADTESE 121 FG GL +NI +AY+F+ NY E +IY FGFSRGAF+ R I G++ + Sbjct: 90 FGQGLVQNIREAYRFLIFNY--EVGDEIYAFGFSRGAFSARVFLGFIRHAGILSRKHAAR 147 Query: 122 LHDGAVKAYRAYRAEGYHSIWRIEVPFRA--LRDYVLVRLWDRLRGNKPYAEIT-RKPVP 178 + D A+ YR R G + + FRA R+ + D R + P+ Sbjct: 148 I-DEAMAHYR-QRLSGLDPEGQKVMRFRAEYARNICVDLAEDAWRTANIAGYVQGSSPLL 205 Query: 179 AIEFIGIWDTVAAYGLPIDEMTRGISNWV-WPLELPNRILSPKVKCARHALALDDERTTF 237 I+++G+WDTV A GLP + G S W+ E + L+ V ARHA+ALD+ R F Sbjct: 206 QIKYLGVWDTVGAMGLP--AVLPG-SKWLNRKHEFLDTTLTDMVLSARHAVALDERRKLF 262 Query: 238 HPVLWTEQEPGQPAPAVPASIDGERLVQVWFVGMHANVGGGYPDDAVAFVPLAWLVDEAV 297 LW + + Q WF G H VGGG ++ LAW+V A Sbjct: 263 PITLWDNIDALNRTRQFDSEDPKAPYQQKWFPGTHGGVGGGGDIRGLSDGALAWIVQGAK 322 Query: 298 KRGLDFKSAPVAD-----PDAIKSIKSSEDKDGRLYDS----RAGLGAYYRYGP 342 GL+ P + PD +SI + L + RAG A + P Sbjct: 323 AAGLEMDIGPDSRMGGLFPDWTQSIDNMSKPKKSLMSALAADRAGPTALWEVSP 376 >mll2265 Non COG Length = 584 Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 19/242 (7%) Query: 524 RAKPTPLSGFMHDAIYRFRTSAVYQWILNVGKRHVVPFALTALLVWFGATLLSHFLFNAF 583 RA TP+S + AI R + Q + + + +++P A AL + ++ +F Sbjct: 344 RAASTPVSLVIARAI---RNNHGAQRLYKLLREYLLPAAFLALSAYLVVCAVNKTIFEVA 400 Query: 584 DSMGAFCTGTAADKLVAVDKGIPQDAAGFDTGAICAPTGLKVRTGFEYEIAITM--SEPW 641 DSMG +C V++ + +AGF T A+C+ TG ++ G YE+ +T+ +PW Sbjct: 401 DSMGTYCAEPVLANSTGVER-LSATSAGFKTNAMCSDTGNWLQEGVRYEVIVTIDPKDPW 459 Query: 642 EDAGRAVTPIGYR-----TSTIEGTKRWRGYATIFLRRILFRPWFRLIARVGETGVDEYF 696 D + PI R EG+ Y L+R P+F+ IAR+G G DEY Sbjct: 460 IDGEKDPDPIRDRGCADTMGVAEGS--LVHYLASLLKRWWAEPYFKPIARIGRFGNDEYA 517 Query: 697 LDPLPVSNTDPQVYKARFTAD----RSGEIFLYVNEAVIGLPWVYRWFY-GDHKGKAKVT 751 LDP+ T + R TA+ SGE++ YVN+AVI LP V +FY ++ G A+V+ Sbjct: 518 LDPVG-PTTLGKCLNMRLTAEIKPKNSGELYFYVNDAVIALPGVSNFFYRHNNLGSAEVS 576 Query: 752 VR 753 V+ Sbjct: 577 VK 578 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 107/277 (38%), Gaps = 54/277 (19%) Query: 292 LVDEAVKRGLDFKSAPVADPDAIKSIKSSEDKDGRLYDSRAGLGAYYRYGPRKVADLCND 351 ++ EA ++ L FKS VAD + GR+YDSR+G G +YRY PR V DL Sbjct: 1 MIGEAAEQKLRFKSEVVAD------YWDYASEAGRIYDSRSGFGVFYRYHPRNVKDLMGR 54 Query: 352 PYAGVSVPMPKIHESVFERIDSGANAYAPIGLPPNYVVVSRSGQVIP----LGANTFETP 407 GV+ P + SV RI G++ YAPI LP + V++ G +P +G T Sbjct: 55 ---GVT---PLVDASVITRIAKGSDDYAPISLPEEFDVLTPLGFKVPFTDLIGGRPVPTA 108 Query: 408 AG---------------------------------APARYAAQEKLWNYVWMRRIAYFAT 434 AG A R + + VW RR Y+ Sbjct: 109 AGVVDKLELPEDRKRDLATMNTKFGQALGAFKPQSAEGRTERFQLTKDTVWWRRGLYYVM 168 Query: 435 LAASLHLAAFWLFHNQHKEHEFSSYVRMISEL----VRFVQSFLPDSFHWWTDWYAGNPE 490 L+ ++ AAF L + + L + + FLP W D + Sbjct: 169 LSIAVLFAAFPLLAGYVTLGATGQLEQAANGLAGPVIGLISGFLPGLAAPWVDAVTTHSG 228 Query: 491 WFTGGILAVIVLMGAGSSLSATIRDRMRIIWR-DRAK 526 ++A+ + L I DR R+ W DR + Sbjct: 229 LAAILVVALGFFLWINGVLRTRIDDRARLAWNVDRGQ 265