BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0117.p         (75 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl805 [S] COG5487 Small integral membrane protein Atu Agrobacte...    70   9e-13
SMb20084 [S] COG5487 Small integral membrane protein Sme Sinorhi...    64   8e-11

>AGl805 [S] COG5487 Small integral membrane protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 111

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 46/55 (83%)

Query: 16  ERAMTILKWALIFLVVSIIAGLFGFTGISAASADIARFLFYVFVVIFLVLLILGL 70
           +R   +LKWALIF V+S+IAG+FGFTGISAA+A +AR LF++ VVIFLV L+L L
Sbjct: 50  KRGSAMLKWALIFFVISLIAGVFGFTGISAAAAGVARILFFIAVVIFLVFLVLAL 104


>SMb20084 [S] COG5487 Small integral membrane protein Sme Sinorhizobium
          meliloti
          Length = 57

 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 43/52 (82%)

Query: 21 ILKWALIFLVVSIIAGLFGFTGISAASADIARFLFYVFVVIFLVLLILGLTI 72
          +LKWALIF V+S+IAG  GF+G+SAA+A IA+ LFY+ V+IFLV L+L L +
Sbjct: 1  MLKWALIFFVISLIAGFLGFSGVSAATAGIAKILFYIAVIIFLVFLVLALAV 52