BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0092.p         (71 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc3157 [J] COG0525 Valyl-tRNA synthetase Atu Agrobacterium tume...    65   4e-11
SA1488 [J] COG0525 Valyl-tRNA synthetase Sau Staphylococcus aure...    60   1e-09
mll1104 [J] COG0525 Valyl-tRNA synthetase Mlo Mesorhizobium loti       60   2e-09
lin1587 [J] COG0525 Valyl-tRNA synthetase Lin Listeria innocua         59   2e-09
YPO3443 [J] COG0525 Valyl-tRNA synthetase Ype Yersinia pestis          58   5e-09

>AGc3157 [J] COG0525 Valyl-tRNA synthetase Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 947

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 52/71 (73%)

Query: 1   VIDLAAERTRLEKELGKADADIKRVDAKLANEKFVANAPEELVEEEKEKRAAATERRAKI 60
           ++DLAAE+ RLEK +GK DA+++R+D KL+NEKFVANA  E+V  E+E++A    + A +
Sbjct: 877 LVDLAAEQARLEKAIGKVDAEMERIDKKLSNEKFVANADPEVVAAERERKAELDVQLASL 936

Query: 61  LEAIERLKKAS 71
             A+ R+ +A 
Sbjct: 937 RTALTRVSEAG 947


>SA1488 [J] COG0525 Valyl-tRNA synthetase Sau Staphylococcus aureus N315
          Length = 876

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 46/68 (67%)

Query: 1   VIDLAAERTRLEKELGKADADIKRVDAKLANEKFVANAPEELVEEEKEKRAAATERRAKI 60
           +ID+  E +RLEKEL K  +++ RVD KL+NE FV+ APE+++ EEK K+    E+   +
Sbjct: 808 LIDMDKEISRLEKELAKLQSELDRVDKKLSNENFVSKAPEKVINEEKRKKQDYQEKYDGV 867

Query: 61  LEAIERLK 68
              IE+LK
Sbjct: 868 KARIEQLK 875


>mll1104 [J] COG0525 Valyl-tRNA synthetase Mlo Mesorhizobium loti
          Length = 927

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 49/71 (69%)

Query: 1   VIDLAAERTRLEKELGKADADIKRVDAKLANEKFVANAPEELVEEEKEKRAAATERRAKI 60
           +IDLAAE  RL+KEL K   +I R+  KL+NE+FVA+AP E+VE E+EK A   + + K+
Sbjct: 857 LIDLAAEAARLQKELAKVTEEIARLHKKLSNERFVASAPAEIVEAEREKLAEYRDAQDKL 916

Query: 61  LEAIERLKKAS 71
             A+ R++ A 
Sbjct: 917 AVALTRVRDAG 927


>lin1587 [J] COG0525 Valyl-tRNA synthetase Lin Listeria innocua
          Length = 882

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 45/68 (66%)

Query: 1   VIDLAAERTRLEKELGKADADIKRVDAKLANEKFVANAPEELVEEEKEKRAAATERRAKI 60
           +IDL  E  RLEKEL K + ++ RV  KL NE+F++ APE +V EE+ K     E++A +
Sbjct: 813 LIDLDLEIARLEKELEKWNKEVARVQGKLNNERFISKAPENVVAEERLKEKDYLEKKASV 872

Query: 61  LEAIERLK 68
           LE IE LK
Sbjct: 873 LERIETLK 880


>YPO3443 [J] COG0525 Valyl-tRNA synthetase Ype Yersinia pestis
          Length = 965

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 44/62 (70%)

Query: 1   VIDLAAERTRLEKELGKADADIKRVDAKLANEKFVANAPEELVEEEKEKRAAATERRAKI 60
           +ID A E  RL KE+ K DA+I+R++ KL NE FVA APE +V +E+E+ AA  E + K+
Sbjct: 896 LIDKATELDRLAKEVAKLDAEIERIEGKLGNEGFVARAPEAVVAKERERLAACAEAKQKL 955

Query: 61  LE 62
           +E
Sbjct: 956 IE 957