BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0084.p         (103 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc01037 [H] COG0320 Lipoate synthase Sme Sinorhizobium meliloti      160   7e-40
AGc2646 [H] COG0320 Lipoate synthase Atu Agrobacterium tumefacie...   156   1e-38
BMEI0859 [H] COG0320 Lipoate synthase Bme Brucella melitensis         156   1e-38
mlr0392 [H] COG0320 Lipoate synthase Mlo Mesorhizobium loti           152   2e-37
CC1735 [H] COG0320 Lipoate synthase Ccr Caulobacter vibrioides        151   3e-37

>SMc01037 [H] COG0320 Lipoate synthase Sme Sinorhizobium meliloti
          Length = 322

 Score =  160 bits (405), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 86/97 (88%)

Query: 2   PITFWSFRIMVGLGEERHEVLQVMDDLRSAEVDFLTIGQYLQPTRKHHAVMRYVTPDEFA 61
           P  F    IMVGLGEER+EVLQ+MDDLR+A+VDFLTIGQYLQP+RKHH V ++VTP+EF 
Sbjct: 218 PTMFTKSGIMVGLGEERNEVLQLMDDLRTADVDFLTIGQYLQPSRKHHKVEKFVTPEEFK 277

Query: 62  GYERVAYTKGFLMVSASPLTRSSHHAGEDFAKLQAAR 98
            YE VAYTKGFLMVS+SPLTRSSHHAG+DFA+L+AAR
Sbjct: 278 SYETVAYTKGFLMVSSSPLTRSSHHAGDDFARLKAAR 314


>AGc2646 [H] COG0320 Lipoate synthase Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 323

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/100 (74%), Positives = 84/100 (84%)

Query: 2   PITFWSFRIMVGLGEERHEVLQVMDDLRSAEVDFLTIGQYLQPTRKHHAVMRYVTPDEFA 61
           P  F    IMVGLGEER+EVLQ+MDDLRSA+VDFLTIGQYLQPTRKHH V  +VTP+EF 
Sbjct: 218 PTMFTKSGIMVGLGEERNEVLQLMDDLRSADVDFLTIGQYLQPTRKHHKVEAFVTPEEFK 277

Query: 62  GYERVAYTKGFLMVSASPLTRSSHHAGEDFAKLQAARTAR 101
            YE VAY KGFLMVS+SPLTRSSHHAG+DF +L+AAR  +
Sbjct: 278 SYETVAYAKGFLMVSSSPLTRSSHHAGDDFERLRAAREKK 317


>BMEI0859 [H] COG0320 Lipoate synthase Bme Brucella melitensis
          Length = 322

 Score =  156 bits (394), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/99 (72%), Positives = 85/99 (85%)

Query: 2   PITFWSFRIMVGLGEERHEVLQVMDDLRSAEVDFLTIGQYLQPTRKHHAVMRYVTPDEFA 61
           P  F    IMVGLGEER+E+LQ+MDDLRSA+VDF+TIGQYLQPTRKHH V+R+V PDEF 
Sbjct: 217 PTIFTKSGIMVGLGEERNEILQLMDDLRSADVDFMTIGQYLQPTRKHHPVIRFVKPDEFK 276

Query: 62  GYERVAYTKGFLMVSASPLTRSSHHAGEDFAKLQAARTA 100
            +E +  TKGFL+V++SPLTRSSHHAGEDFAKL+AAR A
Sbjct: 277 SFETIGKTKGFLLVASSPLTRSSHHAGEDFAKLKAAREA 315


>mlr0392 [H] COG0320 Lipoate synthase Mlo Mesorhizobium loti
          Length = 321

 Score =  152 bits (383), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 68/100 (68%), Positives = 86/100 (86%)

Query: 2   PITFWSFRIMVGLGEERHEVLQVMDDLRSAEVDFLTIGQYLQPTRKHHAVMRYVTPDEFA 61
           P  F    IMVGLGEER+E+LQ+MDDLRSA VDF+TIGQYLQP++KHH V+R+VTP+EF 
Sbjct: 217 PSIFTKSGIMVGLGEERNEILQLMDDLRSANVDFMTIGQYLQPSKKHHPVIRFVTPEEFK 276

Query: 62  GYERVAYTKGFLMVSASPLTRSSHHAGEDFAKLQAARTAR 101
            +E +  TKGFL+V++SPLTRSSHHAG+DFA+L+AAR A+
Sbjct: 277 SFETIGRTKGFLLVASSPLTRSSHHAGDDFARLRAAREAQ 316


>CC1735 [H] COG0320 Lipoate synthase Ccr Caulobacter vibrioides
          Length = 325

 Score =  151 bits (382), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/99 (72%), Positives = 82/99 (82%)

Query: 2   PITFWSFRIMVGLGEERHEVLQVMDDLRSAEVDFLTIGQYLQPTRKHHAVMRYVTPDEFA 61
           P  F    +MVGLGE + EV+QVMDD+RSA VDF+TIGQYLQPTRKH A+ R+VTP+EF 
Sbjct: 221 PSQFTKSGLMVGLGETKEEVMQVMDDMRSAGVDFITIGQYLQPTRKHAAIDRFVTPEEFK 280

Query: 62  GYERVAYTKGFLMVSASPLTRSSHHAGEDFAKLQAARTA 100
            YE +A  KGFLMVS+SPLTRSSHHAGEDFAKLQAAR A
Sbjct: 281 AYEAIARAKGFLMVSSSPLTRSSHHAGEDFAKLQAARRA 319