BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0066.p (346 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0084 [S] COG3517 Uncharacterized protein conserved in bacteria... 497 e-140 YPO2938 [S] COG3517 Uncharacterized protein conserved in bacteri... 478 e-135 STM0274 [S] COG3517 Uncharacterized protein conserved in bacteri... 467 e-131 YPO0501 [S] COG3517 Uncharacterized protein conserved in bacteri... 452 e-127 mlr2338 Non COG 420 e-117 >PA0084 [S] COG3517 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 498 Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust. Identities = 235/342 (68%), Positives = 276/342 (80%), Gaps = 3/342 (0%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEP+GCL+GDYYF P DV+LL +++KI+ A HAPF S A PT+MGM SW ELSNPRD Sbjct: 156 GGEPYGCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRD 215 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 + K+F TPEYA W+ LR+ +DSRY+GL MPR L RLPYGAK++PVEEFAFEEETDG Sbjct: 216 LTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSS 275 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 KY W N+AYAMAVNINR+FK +GWC+RIRGV+SGGEV LP HTFPTDDGGVD+KCPTEI Sbjct: 276 KYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEI 335 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRLP 241 AISDRRE ELAK G +PL+H+KNTD AAFIGAQSL KP +Y DATA+ NL++RLP Sbjct: 336 AISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEY---DDPDATANANLAARLP 392 Query: 242 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLAA 301 Y+FA RFAHYLKC+VRDKIGS KEKDE+ WLQ WI YVD +PA S+E KA+ PLAA Sbjct: 393 YLFATCRFAHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAA 452 Query: 302 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPG 343 A+V V E NPGYYN++FFLRPH+QLE + V L LVS+LP Sbjct: 453 AEVVVEEVEGNPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPS 494 >YPO2938 [S] COG3517 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 500 Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust. Identities = 224/343 (65%), Positives = 263/343 (76%), Gaps = 4/343 (1%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEP+GCL+ DYYF H DV LL + K+A +AH PF +GA P+++ M+SW ELSNPRD Sbjct: 156 GGEPYGCLVADYYFDHTAPDVDLLASIGKVAASAHVPFITGAAPSVLQMESWQELSNPRD 215 Query: 62 IGKVF-DTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTG 120 + K+F EYAAW LR +DSRY+GL MPR L RLPYG + PV+ F FEE TDG Sbjct: 216 LTKIFTQNLEYAAWNSLRQSEDSRYIGLAMPRFLSRLPYGINTNPVDAFHFEETTDGADH 275 Query: 121 DKYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTE 180 KY W NAAYAMAVNINR+FKE+GWCT IRGV+SGG V LP HTFPTDDGG+D+KCPTE Sbjct: 276 SKYVWSNAAYAMAVNINRSFKEYGWCTLIRGVESGGVVEGLPCHTFPTDDGGIDMKCPTE 335 Query: 181 IAISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRL 240 IAISDRRE ELAK G IPL+HRKNTD AAFIGAQSL KP +Y+ DATA+ NLS+RL Sbjct: 336 IAISDRREAELAKNGFIPLVHRKNTDYAAFIGAQSLQKPAEYYDS---DATANANLSARL 392 Query: 241 PYMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLA 300 PY+FA SRFAHYLKC+VRDKIGS KE+DE+ WL W+ YVD +PA SS KAR+PLA Sbjct: 393 PYLFACSRFAHYLKCIVRDKIGSFKERDEMQRWLNDWVMNYVDGDPANSSLETKARRPLA 452 Query: 301 AAKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPG 343 AA+V V E NPGYY A+FFLRPHFQLE + V L +V++LP Sbjct: 453 AAEVIVEEVEGNPGYYQAKFFLRPHFQLEGLTVSLRMVAKLPS 495 >STM0274 [S] COG3517 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 502 Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust. Identities = 224/343 (65%), Positives = 268/343 (78%), Gaps = 4/343 (1%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEP+GC+I DYYF H P DV LL ++K+A +AHAPF +GA P+++ MDSW EL+NPRD Sbjct: 157 GGEPYGCIIADYYFDHTPPDVDLLGSIAKVAASAHAPFIAGASPSVLQMDSWQELANPRD 216 Query: 62 IGKVF-DTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTG 120 + K+ EYA W LR +DSRY+GL MPR L RLPYGAK+ PV+EF FEE+ DG Sbjct: 217 LTKIVTQNLEYAPWNSLRASEDSRYIGLTMPRFLARLPYGAKTNPVDEFDFEEDADGSDH 276 Query: 121 DKYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTE 180 KY W NAAYAM VNINR+FK +GWCT IRGV+SGG V NLP HTFPTDDGGVD+KCPTE Sbjct: 277 TKYVWSNAAYAMGVNINRSFKHYGWCTLIRGVESGGAVENLPCHTFPTDDGGVDMKCPTE 336 Query: 181 IAISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRL 240 IAISDRRE ELAK G IPLIHRKN+D AAFIGAQSL KP++Y+ DATA+ NLS+RL Sbjct: 337 IAISDRREAELAKNGFIPLIHRKNSDYAAFIGAQSLQKPQEYYDP---DATANANLSARL 393 Query: 241 PYMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLA 300 PY+FA SRFAH+LKC+VRDKIGS KE++++ WL WI YVDA+P SS+ KAR+PLA Sbjct: 394 PYLFACSRFAHFLKCIVRDKIGSFKEREDMQRWLNEWIMNYVDADPVNSSQETKARRPLA 453 Query: 301 AAKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPG 343 AA+V V E NPGYY+A+FFLRPHFQLE + L LV++LP Sbjct: 454 AAEVVVEEVEGNPGYYDAKFFLRPHFQLEGLTGSLRLVTKLPS 496 >YPO0501 [S] COG3517 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 503 Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust. Identities = 201/342 (58%), Positives = 264/342 (77%), Gaps = 3/342 (0%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEPFGC+IGDY F H P V LL +L+K+A AAH PF + + P++M M++W EL NPRD Sbjct: 158 GGEPFGCMIGDYEFDHSPQSVALLTELAKVAAAAHCPFITSSSPSIMQMNNWRELGNPRD 217 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 IGK+F TPEYA W+ LR+ +DSRYL L +PR L RLPYGAK+ P+++FAFEE H + Sbjct: 218 IGKIFTTPEYAPWRRLRESNDSRYLVLTLPRFLSRLPYGAKNHPIDDFAFEEVVSPHASE 277 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 + W NAAYAM VNINRAF E+GWC+RIRG++SGG V LP + FP+D+GG +L CPTE+ Sbjct: 278 DFTWANAAYAMGVNINRAFNEYGWCSRIRGIESGGSVEELPAYAFPSDEGGYELTCPTEL 337 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGDKGVDATASDNLSSRLP 241 AISDRRE+EL+ AG +PL++RKN+D AAFIG+ +L+ P Y DATA+ LS+RLP Sbjct: 338 AISDRRENELSNAGFLPLVYRKNSDFAAFIGSCTLHAPANY---DDPDATANARLSARLP 394 Query: 242 YMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLAA 301 Y+FA RFAHYLKC+VRDKIGS + +D++ +WL W+ YVD +P++S+EA KA++PLAA Sbjct: 395 YIFATCRFAHYLKCIVRDKIGSFRSRDDMQLWLNDWVMNYVDGDPSISTEATKAKRPLAA 454 Query: 302 AKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLPG 343 A+V+V E++PG+Y A F+LRPH+QLE M V L LVS+LP Sbjct: 455 AEVQVEDVEDDPGFYRAHFYLRPHYQLEGMTVSLRLVSKLPS 496 >mlr2338 Non COG Length = 501 Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust. Identities = 194/342 (56%), Positives = 253/342 (73%), Gaps = 2/342 (0%) Query: 2 GGEPFGCLIGDYYFSHLPTDVQLLRDLSKIAGAAHAPFFSGAEPTLMGMDSWTELSNPRD 61 GGEP GC+IG Y FS+ P DV LLR++S + +AH PF + A P L MDSW EL NP+D Sbjct: 157 GGEPIGCIIGAYEFSNHPRDVGLLRNISGVCASAHTPFIAAASPRLFRMDSWQELPNPQD 216 Query: 62 IGKVFDTPEYAAWKGLRDQDDSRYLGLCMPRALGRLPYGAKSEPVEEFAFEEETDGHTGD 121 + + + P YA+W+ LR+ +D+RY+GL MPR L RLPYG+++ PV+ F FEEE G + Sbjct: 217 LQMIVNNPAYASWQSLRESEDARYIGLTMPRVLARLPYGSETVPVKGFTFEEEVGGDH-N 275 Query: 122 KYGWINAAYAMAVNINRAFKEFGWCTRIRGVQSGGEVINLPTHTFPTDDGGVDLKCPTEI 181 KY W+NAA+ M VNINR+ K +GW T+IRGV++GG V+NLP H FPTDDG + +KCPTE+ Sbjct: 276 KYVWMNAAFPMGVNINRSHKLYGWGTQIRGVENGGTVLNLPVHAFPTDDGSIAMKCPTEV 335 Query: 182 AISDRREHELAKAGLIPLIHRKNTDKAAFIGAQSLYKPKKYFGD-KGVDATASDNLSSRL 240 AI DRRE ELAK GL+P++HRKNTD AAFIGA SL + G DA +++ LS+ L Sbjct: 336 AIDDRREAELAKLGLMPILHRKNTDLAAFIGAHSLQDDETRAGRLVDPDAQSNERLSANL 395 Query: 241 PYMFAVSRFAHYLKCMVRDKIGSMKEKDELTVWLQTWINEYVDANPALSSEAQKARKPLA 300 PY+F VSRFAHYLK + RDKIGS KE+ ++ +WL WIN YV ANPA + + +A++PLA Sbjct: 396 PYLFPVSRFAHYLKAIARDKIGSFKERTDMEIWLTEWINRYVLANPAFADDKARAKRPLA 455 Query: 301 AAKVEVIANEENPGYYNARFFLRPHFQLEAMDVGLSLVSRLP 342 AA+V+V + E PGYYNARF+LRPH+QLE ++ L LVS LP Sbjct: 456 AAEVQVDSVEGRPGYYNARFYLRPHYQLEGINASLRLVSELP 497