BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0060.p (186 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0090 [O] COG0542 ATPases with chaperone activity, ATP-binding ... 241 7e-64 mll2335 [O] COG0542 ATPases with chaperone activity, ATP-binding... 207 9e-54 YPO2946 [O] COG0542 ATPases with chaperone activity, ATP-binding... 179 2e-45 RSp0749 [O] COG0542 ATPases with chaperone activity, ATP-binding... 176 2e-44 STM0272 [O] COG0542 ATPases with chaperone activity, ATP-binding... 166 3e-41 >PA0090 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Pae Pseudomonas aeruginosa Length = 902 Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 114/185 (61%), Positives = 144/185 (77%) Query: 1 VEKAHPDVHEIFFQVFDKGVMEDGNGRRIDFKNTLIILTTNVGTDLIMSLARDPKYRNEP 60 VEKAHPDVHEIFFQVFDKGVMEDG GR IDFKNTLI+LTTN GT++I SL DP+ EP Sbjct: 714 VEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTEMIASLCADPELMPEP 773 Query: 61 EELARLLRPELLKVFPAALLGRIVSIPYFPLSDEMLAGIVRLQLDRIGQRLRDNHKAAFG 120 E +A+ LR LLK+FP ALLGR+V+IPY+PLSD+ML I RLQL RI +R+ HK F Sbjct: 774 EAIAKSLREPLLKIFPPALLGRLVTIPYYPLSDDMLKAISRLQLGRIKKRVEATHKVPFE 833 Query: 121 YDDAVVEHIVSRCNDPDSGGRMIDNIITNTLLPELSREFLSKSLAKEEVKQTRVSIVNDK 180 +D+ VV+ IVSRC + +SGGRMID I+TNTLLP++SREFL++ L + + R+S +++ Sbjct: 834 FDEGVVDLIVSRCTETESGGRMIDAILTNTLLPDMSREFLTRMLEGKPLAGVRISSRDNQ 893 Query: 181 FAYSW 185 F Y + Sbjct: 894 FHYDF 898 >mll2335 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Mlo Mesorhizobium loti Length = 945 Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 99/186 (53%), Positives = 134/186 (72%) Query: 1 VEKAHPDVHEIFFQVFDKGVMEDGNGRRIDFKNTLIILTTNVGTDLIMSLARDPKYRNEP 60 VEKAHPDVHEIFFQVFDKG+M+D GRRIDFKNTLI+LT+NVG+++IM ++ R Sbjct: 760 VEKAHPDVHEIFFQVFDKGMMDDSEGRRIDFKNTLILLTSNVGSEVIMDRTKNGTLRTGM 819 Query: 61 EELARLLRPELLKVFPAALLGRIVSIPYFPLSDEMLAGIVRLQLDRIGQRLRDNHKAAFG 120 ++L LR LLKVFPAA LGR+V+IPY+PLSD M+ I R Q +I +RL+ + A Sbjct: 820 DDLDTALRGPLLKVFPAAFLGRVVTIPYYPLSDAMIEAITRHQFGKIARRLKATNDAELV 879 Query: 121 YDDAVVEHIVSRCNDPDSGGRMIDNIITNTLLPELSREFLSKSLAKEEVKQTRVSIVNDK 180 D V++ + +RC + +SGGRMID I+TNTLLPELSR L++SL +++ + V ++ Sbjct: 880 IGDGVMDMVKARCTEIESGGRMIDAILTNTLLPELSRGVLNRSLEGKKMTKVTVGASSEG 939 Query: 181 FAYSWN 186 F YS+ Sbjct: 940 FTYSFE 945 >YPO2946 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Ype Yersinia pestis Length = 891 Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 87/168 (51%), Positives = 112/168 (66%) Query: 1 VEKAHPDVHEIFFQVFDKGVMEDGNGRRIDFKNTLIILTTNVGTDLIMSLARDPKYRNEP 60 +EKAH DVHE+FFQVFDKG MEDG GR IDFKNT+++LT+NVG++L+ +L DP + Sbjct: 701 IEKAHSDVHELFFQVFDKGQMEDGEGRFIDFKNTILLLTSNVGSELLSNLLADPDTAPDQ 760 Query: 61 EELARLLRPELLKVFPAALLGRIVSIPYFPLSDEMLAGIVRLQLDRIGQRLRDNHKAAFG 120 + + L+PELLKVFPAA LGR+ IPY PL + L IVRL LDRIG RL H+ Sbjct: 761 DGILSALQPELLKVFPAAFLGRVTVIPYLPLQQDALQHIVRLHLDRIGARLYSQHQLTLK 820 Query: 121 YDDAVVEHIVSRCNDPDSGGRMIDNIITNTLLPELSREFLSKSLAKEE 168 Y D VVE +VSRC ++G RM+ I + P++ + L S K E Sbjct: 821 YSDEVVEDVVSRCAVSETGARMLIRYIEQNITPKIGKYILGDSDVKPE 868 >RSp0749 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Rso Ralstonia solanacearum Length = 905 Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 3/189 (1%) Query: 1 VEKAHPDVHEIFFQVFDKGVMEDGNGRRIDFKNTLIILTTNVGTDLIMSLARDPKYRNEP 60 VEKAHPDV E+FFQVFDKG M+D GR IDF+NT+IILT+NVG+ IM + P Sbjct: 717 VEKAHPDVLEMFFQVFDKGEMDDAEGRPIDFRNTIIILTSNVGSSAIMQACLNQPAEALP 776 Query: 61 EE--LARLLRPELLKVFPAALLGRIVSIPYFPLSDEMLAGIVRLQLDRIGQRLRDNHKAA 118 + LA LRP L K F A LGR +PY+P++D++LA I+ L+L RI R+ NHKA Sbjct: 777 DADTLAETLRPVLYKAFKPAFLGRTKVVPYYPIADDVLAEIITLKLGRIRDRVAANHKAT 836 Query: 119 FGYDDAVVEHIVSRCNDPDSGGRMIDNIITNTLLPELSREFLSKSLAKEEVKQTRVSI-V 177 F +D+A+VE +++RC + D+G R +D+I+ TLLPE++ L++ V++ +VS+ Sbjct: 837 FQWDNALVESVLARCTEVDAGARAVDHILNGTLLPEIAEAVLTRMAEGGSVEKIKVSVGK 896 Query: 178 NDKFAYSWN 186 +F Y N Sbjct: 897 TGEFKYRIN 905 >STM0272 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Sty Salmonella typhimurium LT2 Length = 879 Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 80/180 (44%), Positives = 108/180 (60%) Query: 1 VEKAHPDVHEIFFQVFDKGVMEDGNGRRIDFKNTLIILTTNVGTDLIMSLARDPKYRNEP 60 +EKAH DVHE+F+QVFDKG MEDG G +DFKNT ++LTTNVG+DLI + DP + Sbjct: 692 IEKAHHDVHELFYQVFDKGGMEDGEGTHVDFKNTTLLLTTNVGSDLISQMCEDPALMPDA 751 Query: 61 EELARLLRPELLKVFPAALLGRIVSIPYFPLSDEMLAGIVRLQLDRIGQRLRDNHKAAFG 120 L L PEL K FPAA LGR+ IPY PL + I RL LDR+ R+ + H Sbjct: 752 TGLKEALMPELRKHFPAAFLGRVTVIPYLPLDETSRGVIARLHLDRLVARMSEQHGVTLT 811 Query: 121 YDDAVVEHIVSRCNDPDSGGRMIDNIITNTLLPELSREFLSKSLAKEEVKQTRVSIVNDK 180 Y + +V HIV+ C ++G R++ I +LP LSR +L K ++Q + + D+ Sbjct: 812 YSEELVAHIVACCPMHETGARLLIGYIEQHILPRLSRYWLQAMTEKAAIRQIDIGVNGDE 871