BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0047.p (207 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll5295 Non COG 190 2e-48 FN1841 [G] COG2376 Dihydroxyacetone kinase Fnu Fusobacterium nuc... 152 5e-37 lin2844 [G] COG2376 Dihydroxyacetone kinase Lin Listeria innocua 152 6e-37 Z1970 [G] COG2376 Dihydroxyacetone kinase EcZ Escherichia coli O... 151 1e-36 ECs1704 [G] COG2376 Dihydroxyacetone kinase Ecs Escherichia coli... 151 1e-36 >mll5295 Non COG Length = 200 Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 110/191 (57%), Positives = 138/191 (72%), Gaps = 9/191 (4%) Query: 11 LLKAAAEQVIASAPELTSLDQAIGDGDHGTNMKRGFEAVLGKLDAISAQPLNEAFKTIGK 70 L+ AA+ + A A ELT+LDQAIGDGDHG NMKRGFEAV + DA +A+PL +A K IG Sbjct: 9 LIAVAADTIAAHAEELTALDQAIGDGDHGLNMKRGFEAVRAEADAFAAKPLPDALKAIGT 68 Query: 71 TLVMTVGGASGPLYGSFFLAAGEALSQDKHLPD--DLADVFGSGVDAVSARGRSQAGEKT 128 LVMTVGGASGPL+G+ F+A G+A++ D PD +LA FG V+AV+ARG+SQ G+KT Sbjct: 69 KLVMTVGGASGPLFGTLFMALGKAIAAD---PDRKNLAAAFGKAVEAVAARGKSQIGQKT 125 Query: 129 MLDVLVPVLETLKAGAGQPDLIARVRTTAAEAVERTVPMQATKGRASFLGARSVGHVDPG 188 MLDVL PV + L AG A + A A E TVPM+A +GRASFLG RSVGH+D G Sbjct: 126 MLDVLQPVHDAL---AGDKT-AAEIADIADAAAEATVPMKALRGRASFLGERSVGHMDAG 181 Query: 189 ARSSCVLLHAV 199 ARS+ +L+ +V Sbjct: 182 ARSTALLVRSV 192 >FN1841 [G] COG2376 Dihydroxyacetone kinase Fnu Fusobacterium nucleatum Length = 202 Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 8 FKSLLKAAAEQVIASAPELTSLDQAIGDGDHGTNMKRGFEAVLGKLDAISAQPLNEAFKT 67 + ++K ++++I + LT LD+ IGDGDHG N+ RGF + +L+ P+++ F Sbjct: 2 YLEIIKKISDEIIKNEEYLTELDREIGDGDHGVNLARGFTEIKNQLNNFKDLPVSDVFTK 61 Query: 68 IGKTLVMTVGGASGPLYGSFFLAAGEALSQDKHLPDD-LADVFGSGVDAVSARGRSQAGE 126 +G L+ VGGASG +YG+ F++AG L + L + S ++ + RG++ E Sbjct: 62 MGMILLTKVGGASGAIYGTAFMSAGTYLKGKTEFNNQILLETLNSMIEGIQKRGKAVLNE 121 Query: 127 KTMLDVLVPVLETLKA----GAGQPDLIARVRTTAAEAVERTVPMQATKGRASFLGARSV 182 KTMLD ++P L+ G D+ V A ++E T + ATKGRAS+LG RSV Sbjct: 122 KTMLDTIMPTYNFLEKSFNEGKNLKDIKNEVIEVAKNSMEATKDIIATKGRASYLGERSV 181 Query: 183 GHVDPGARSSCVLLHAVCAGL 203 GH+DPGA SS +++ VC + Sbjct: 182 GHIDPGAMSSYIMIKTVCENI 202 >lin2844 [G] COG2376 Dihydroxyacetone kinase Lin Listeria innocua Length = 198 Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 1 MSVQPETFKSLLKAAAEQVIASAPELTSLDQAIGDGDHGTNMKRGFEAVLGKLDAISAQP 60 M+ + L E+V + L+ LDQAIGDGDHG NM RG + Sbjct: 1 MTYDKDWALRWLNDFGERVQENKQLLSDLDQAIGDGDHGINMARGLSELKKAFTEKEPAD 60 Query: 61 LNEAFKTIGKTLVMTVGGASGPLYGSFFLAAGEALSQDKHLPDDLADVFGSGVDAVSARG 120 L + FKT G T+V VGGASGPLYG+ FL +A+ + + L V +G++ + RG Sbjct: 61 LTDVFKTAGMTMVSKVGGASGPLYGTAFLNMSKAVDSETIDAEGLTKVIEAGLEGIEKRG 120 Query: 121 RSQAGEKTMLDVLVPVLETLKAGAGQPDLIARVRTTAAEAVERTVPMQATKGRASFLGAR 180 +S AGEKTM+DV PV+ L Q DL V A+++T ++ATKGRAS+LG R Sbjct: 121 KSHAGEKTMIDVWEPVVNALH----QEDLTDDV---VEAALQKTKDLKATKGRASYLGER 173 Query: 181 SVGHVDPGARSSCVLLHAVC 200 S+GH+DPGA SS +L HA+ Sbjct: 174 SIGHLDPGAYSSALLFHAML 193 >Z1970 [G] COG2376 Dihydroxyacetone kinase EcZ Escherichia coli O157:H7 EDL933 Length = 210 Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 5/179 (2%) Query: 26 LTSLDQAIGDGDHGTNMKRGFEAVLGKLDAISAQPLNEAFKTIGKTLVMTVGGASGPLYG 85 LT LD+ IGD DHG NM RGF V+ KL AI+ + + K G TL+ VGGASGPL+G Sbjct: 26 LTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSCVGGASGPLFG 85 Query: 86 SFFLAAGEALSQDKHLP-DDLADVFGSGVDAVSARGRSQAGEKTMLDVLVPVLETLKAGA 144 +FF+ A +A + L ++L +F G D V +RG+++ G+KTM DV VPV+E+L+ + Sbjct: 86 TFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSS 145 Query: 145 GQ----PDLIARVRTTAAEAVERTVPMQATKGRASFLGARSVGHVDPGARSSCVLLHAV 199 Q P + + A A + T+ MQA KGRAS+LG RS+GH DPGA S ++ + Sbjct: 146 EQNLSVPAALEAASSIAEFAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQML 204 >ECs1704 [G] COG2376 Dihydroxyacetone kinase Ecs Escherichia coli O157:H7 Length = 210 Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 5/179 (2%) Query: 26 LTSLDQAIGDGDHGTNMKRGFEAVLGKLDAISAQPLNEAFKTIGKTLVMTVGGASGPLYG 85 LT LD+ IGD DHG NM RGF V+ KL AI+ + + K G TL+ VGGASGPL+G Sbjct: 26 LTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSCVGGASGPLFG 85 Query: 86 SFFLAAGEALSQDKHLP-DDLADVFGSGVDAVSARGRSQAGEKTMLDVLVPVLETLKAGA 144 +FF+ A +A + L ++L +F G D V +RG+++ G+KTM DV VPV+E+L+ + Sbjct: 86 TFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSS 145 Query: 145 GQ----PDLIARVRTTAAEAVERTVPMQATKGRASFLGARSVGHVDPGARSSCVLLHAV 199 Q P + + A A + T+ MQA KGRAS+LG RS+GH DPGA S ++ + Sbjct: 146 EQNLSVPAALEAASSIAEFAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQML 204