BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0037.p (265 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI0223 [M] COG2951 Membrane-bound lytic murein transglycosylas... 327 1e-89 SMc04411 [M] COG2951 Membrane-bound lytic murein transglycosylas... 312 6e-85 AGc4522 [M] COG2951 Membrane-bound lytic murein transglycosylase... 300 3e-81 SMa2033 [M] COG2951 Membrane-bound lytic murein transglycosylase... 266 2e-71 mll4372 [M] COG2951 Membrane-bound lytic murein transglycosylase... 261 1e-69 >BMEI0223 [M] COG2951 Membrane-bound lytic murein transglycosylase B Bme Brucella melitensis Length = 255 Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 160/249 (64%), Positives = 195/249 (78%), Gaps = 8/249 (3%) Query: 25 ANAAQCGNGPGGFEAWKQQFSGEASAKGIGATAIAALMQTHYASATIAADRGQRSFGLSL 84 A AAQCGN G+ AW QQ EA+++GIG I AL T YA ATI ADR Q+SF LS Sbjct: 7 AEAAQCGNNAAGYNAWLQQTMKEAASRGIGKAGINALANTKYAQATINADRNQKSFKLSF 66 Query: 85 EQFMAKRGSATIVARGRSLKQSQAALFASIQQRYGVPPGPLIAIWGMESGFGSQRGNQNM 144 EQFM KRG+ TI+ RGR++KQ AALFA+I++RYGVP GPLIAIWGME+GFGS G Q+ Sbjct: 67 EQFMQKRGADTIIKRGRAMKQQNAALFANIEKRYGVPAGPLIAIWGMETGFGSYMGKQHT 126 Query: 145 LSSIATLAYDCRRPEFFTDQLYAALKLVDRGTLSGSTRGSMHGEIGQTQFMPKNVLAY-- 202 LS++ATLAYDCRR ++FTDQLYAALKL+DR LS + G+MHGEIGQTQF+P NVL Y Sbjct: 127 LSAVATLAYDCRRSDYFTDQLYAALKLIDREDLSPAAIGAMHGEIGQTQFLPVNVLNYGV 186 Query: 203 ---GTGNLDVA---ANALSSTANFLRAHGWRAGAGYQPGEPNFAAIEAWNAAGVYQKAIA 256 G+G++D+A A+AL STANFL HGW+ GAGYQPGEPN+AAI+ WNAA VYQ+AIA Sbjct: 187 DGDGSGHIDMARSKADALYSTANFLVGHGWQRGAGYQPGEPNYAAIQGWNAAQVYQRAIA 246 Query: 257 IIGRQIDGQ 265 ++G+ IDG+ Sbjct: 247 VMGKAIDGK 255 >SMc04411 [M] COG2951 Membrane-bound lytic murein transglycosylase B Sme Sinorhizobium meliloti Length = 273 Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 157/266 (59%), Positives = 196/266 (73%), Gaps = 9/266 (3%) Query: 8 ATSALAIVVMVATLGAEANAAQCGNGPGGFEAWKQQFSGEASAKGIGATAIA-ALMQTHY 66 A + LA ++ L A A+AAQCGN GF AW +F EA+ GI + + AL Y Sbjct: 7 AAAGLAALISTVVLPAAASAAQCGNDGSGFSAWLSEFKREAAGNGISPSVVDQALANVSY 66 Query: 67 ASATIAADRGQRSFGLSLEQFMAKRGSATIVARGRSLKQSQAALFASIQQRYGVPPGPLI 126 + ATI ADRGQ+SF LSL+QFM KRG I++RG+ L+ A LF SI+QRYGVP GPLI Sbjct: 67 SRATIRADRGQKSFKLSLDQFMQKRGGQMIISRGKKLRAQNARLFQSIEQRYGVPAGPLI 126 Query: 127 AIWGMESGFGSQRGNQNMLSSIATLAYDCRRPEFFTDQLYAALKLVDRGTLSGSTRGSMH 186 AIWGME+GFGS G ++ LS+++TLAYDCRR ++FT+QLYAAL+LV+RG LS + RG+ H Sbjct: 127 AIWGMETGFGSFLGKEHTLSAVSTLAYDCRRSDYFTNQLYAALQLVERGDLSPAARGAAH 186 Query: 187 GEIGQTQFMPKNVLAYGT-----GNLDVA---ANALSSTANFLRAHGWRAGAGYQPGEPN 238 GEIGQTQF+P NVL YG G++D+ A+AL+STANFLR HGW+ G GYQPGE N Sbjct: 187 GEIGQTQFLPVNVLKYGVDGDGNGHVDMVRSKADALASTANFLRGHGWQPGGGYQPGEVN 246 Query: 239 FAAIEAWNAAGVYQKAIAIIGRQIDG 264 FAAI+ WNAA VYQ+AIAIIG +IDG Sbjct: 247 FAAIQGWNAASVYQQAIAIIGAEIDG 272 >AGc4522 [M] COG2951 Membrane-bound lytic murein transglycosylase B Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 272 Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 195/264 (73%), Gaps = 10/264 (3%) Query: 12 LAIVVMVATLGAE-ANAAQCGNGPGGFEAWKQQFSGEASAKGIGATAIA-ALMQTHYASA 69 LA V MV+ L A AAQCGN GF+AW F EA+ +G+ A+ + A Y A Sbjct: 9 LAGVAMVSVLAATPVMAAQCGNTSAGFDAWVSAFKQEAAGRGVSASVLDRAFSGVSYNQA 68 Query: 70 TIAADRGQRSFGLSLEQFMAKRGSATIVARGRSLKQSQAALFASIQQRYGVPPGPLIAIW 129 TI ADRGQ SF LS EQFM KRG TI++RG+++K++ AALFASI++ YGVP GPL+AIW Sbjct: 69 TIRADRGQHSFKLSFEQFMQKRGGQTIISRGKTMKKNNAALFASIERTYGVPAGPLLAIW 128 Query: 130 GMESGFGSQRGNQNMLSSIATLAYDCRRPEFFTDQLYAALKLVDRGTLSGSTRGSMHGEI 189 GME+GFG GNQ+ LS++ATL++DCRR ++FT+QLYAALKLV G+L+ + +G+ HGEI Sbjct: 129 GMETGFGGFMGNQHTLSAVATLSFDCRRSDYFTEQLYAALKLVGSGSLNVNAKGAAHGEI 188 Query: 190 GQTQFMPKNVLAYGT-----GNLDVA---ANALSSTANFLRAHGWRAGAGYQPGEPNFAA 241 GQTQF+P NV+ YG G +D+ A+AL+STANFL HGW+ GAGYQ G+P+FAA Sbjct: 189 GQTQFLPLNVVRYGVDFDRDGRIDLVGSRADALASTANFLVGHGWQRGAGYQQGQPSFAA 248 Query: 242 IEAWNAAGVYQKAIAIIGRQIDGQ 265 I+ WNAA VYQ+AIA IG+ IDGQ Sbjct: 249 IQGWNAASVYQQAIAFIGKAIDGQ 272 >SMa2033 [M] COG2951 Membrane-bound lytic murein transglycosylase B Sme Sinorhizobium meliloti Length = 265 Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 136/248 (54%), Positives = 170/248 (68%), Gaps = 6/248 (2%) Query: 21 LGAEANAAQCGNGPGGFEAWKQQFSGEASAKGIGATAIAALMQTHYASATIAADRG-QRS 79 L A AA CG GF+ WK +F+ A A G+ +AAL+ YA TI ADR ++ Sbjct: 21 LTCVAEAASCGKSAAGFQQWKVEFAETAKAAGVRGKGLAALLGAKYAVGTIRADRSVNKA 80 Query: 80 FGLSLEQFMAKRGSATIVARGRSLKQSQAALFASIQQRYGVPPGPLIAIWGMESGFGSQR 139 F S++ FM +RG + I+++GRSLK + AALF +I+++Y VP G L+AIWGME+GFG+ Sbjct: 81 FSGSVDDFMRRRGGSAIISKGRSLKTANAALFGNIERKYDVPAGVLLAIWGMETGFGASM 140 Query: 140 GNQNMLSSIATLAYDCRRPEFFTDQLYAALKLVDRGTLSGSTRGSMHGEIGQTQFMPKNV 199 GNQN +S+I TLAYDCRRP+FF AALKLVD G LS + G+MHGEIGQT F+P NV Sbjct: 141 GNQNTVSAIVTLAYDCRRPQFFAPHAIAALKLVDSGVLSARSVGAMHGEIGQTGFLPGNV 200 Query: 200 LAYGTG--NLDVAANALSSTANFLRAHGWRAGAGYQPGEPNFAAIEAWNAAGVYQKAIAI 257 L YG G N+ + AL STANFL+AHGWRAG GYQ N AI WN+A VYQKAIA Sbjct: 201 LKYGVGSRNMRDTSTALMSTANFLKAHGWRAGGGYQ---GNMGAIAGWNSASVYQKAIAR 257 Query: 258 IGRQIDGQ 265 IG IDG+ Sbjct: 258 IGEAIDGR 265 >mll4372 [M] COG2951 Membrane-bound lytic murein transglycosylase B Mlo Mesorhizobium loti Length = 285 Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 144/263 (54%), Positives = 184/263 (69%), Gaps = 8/263 (3%) Query: 6 QVATSALAIVVMVATLGAEANAAQCGNGPGGFEAWKQQFSGEASAKGIGATAIAALMQTH 65 ++ +A+ V+ +AT GA+A AA CG+ GF+AWK F+ +A A+G+GA +AAL Sbjct: 28 RILAAAVVAVLGLAT-GAQA-AASCGSTGAGFDAWKPGFAEQAKAEGVGAKGLAALAGAT 85 Query: 66 YASATIAADRG-QRSFGLSLEQFMAKRGSATIVARGRSLKQSQAALFASIQQRYGVPPGP 124 YA+ TI+ DRG ++F S++ FM +RG A I+++GRSLK++ AA+F+ I+ YGV PG Sbjct: 86 YATKTISVDRGIHKAFSGSVDAFMKRRGGAAIISKGRSLKKANAAMFSQIESNYGVSPGV 145 Query: 125 LIAIWGMESGFGSQRGNQNMLSSIATLAYDCRRPEFFTDQLYAALKLVDRGTLSGSTRGS 184 L+AIWGME+GFGS GNQN +S+I TLAYDCRRPEFF AALKLVDRG LS S+ G+ Sbjct: 146 LLAIWGMETGFGSSMGNQNTVSAILTLAYDCRRPEFFHPHAIAALKLVDRGALSASSVGA 205 Query: 185 MHGEIGQTQFMPKNVLAY--GTGNLDVAANALSSTANFLRAHGWRAGAGYQPGEPNFAAI 242 HGEIG TQF+P NVL Y G+GNL A AL+STANFL+AHGWR GA N AI Sbjct: 206 AHGEIGHTQFLPGNVLKYGVGSGNLRDKATALASTANFLKAHGWRRGA---SAADNIGAI 262 Query: 243 EAWNAAGVYQKAIAIIGRQIDGQ 265 WN A VYQ+AI I IDG Sbjct: 263 AGWNDASVYQQAIVRIATAIDGD 285