BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0033.p         (139 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc1521 [P] COG0038 Chloride channel protein EriC Atu Agrobacter...   124   6e-29
BMEII0897 [P] COG0038 Chloride channel protein EriC Bme Brucella...   124   7e-29
mll4356 [P] COG0038 Chloride channel protein EriC Mlo Mesorhizob...   122   2e-28
PM1417 [P] COG0038 Chloride channel protein EriC Pmu Pasteurella...    80   9e-16
NMB2006 [P] COG0038 Chloride channel protein EriC Nme Neisseria ...    77   1e-14

>AGc1521 [P] COG0038 Chloride channel protein EriC Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 447

 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 3/127 (2%)

Query: 1   LLGGIAVGAAAVALAQLADLAQIAFGAVVSHFQYA---SLMLTPAGFALSVFLTNRFFQN 57
            +G IAVG  +VA A  AD AQ  F AV S  ++A    L++TP GF L  +L    F N
Sbjct: 31  WVGAIAVGIISVAFAWAADRAQHLFSAVTSAGEWAFLLPLLITPLGFTLCAWLAISVFPN 90

Query: 58  AQGSGIPQAIAARHLTDQTARESLVSLRVAAGKILLTLFGLLCGASVGREGPTVQIGASI 117
           A GSGIPQAIAARHL D   R  L+SL++A GK++LT+ GLL GAS+GREGPTVQ+GASI
Sbjct: 91  AGGSGIPQAIAARHLRDDADRSRLLSLKLAFGKVVLTVAGLLSGASIGREGPTVQVGASI 150

Query: 118 MFALGRF 124
           M    R+
Sbjct: 151 MLQAARW 157


>BMEII0897 [P] COG0038 Chloride channel protein EriC Bme Brucella melitensis
          Length = 462

 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 84/125 (67%), Gaps = 3/125 (2%)

Query: 3   GGIAVGAAAVALAQLADLAQIAFGAVVSHFQ---YASLMLTPAGFALSVFLTNRFFQNAQ 59
           G +A+G  +V  A+ AD+AQ  F ++ S      +  L++TP GF    ++   +F N+ 
Sbjct: 44  GALAIGIISVGFAEAADIAQDWFHSLTSGSPLRAWLPLLITPLGFMFCSWVALVWFPNSG 103

Query: 60  GSGIPQAIAARHLTDQTARESLVSLRVAAGKILLTLFGLLCGASVGREGPTVQIGASIMF 119
           GSGIPQAIAARHL D   R  L+S+RVA GKI+LT+ GL CGAS+GREGPTVQIGASIM 
Sbjct: 104 GSGIPQAIAARHLNDHEDRSLLLSIRVATGKIVLTIIGLFCGASIGREGPTVQIGASIML 163

Query: 120 ALGRF 124
              RF
Sbjct: 164 QAARF 168


>mll4356 [P] COG0038 Chloride channel protein EriC Mlo Mesorhizobium loti
          Length = 447

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/126 (52%), Positives = 82/126 (65%), Gaps = 4/126 (3%)

Query: 3   GGIAVGAAAVALAQLADLAQIAFGAVVSHFQ----YASLMLTPAGFALSVFLTNRFFQNA 58
           G +++G  +V  A LAD AQ  F  ++        Y  L +TP GF L  +L   FF  +
Sbjct: 33  GAVSIGVISVLFAVLADKAQALFHMMIGDGGGRRFYLPLAITPLGFVLCAWLARAFFPGS 92

Query: 59  QGSGIPQAIAARHLTDQTARESLVSLRVAAGKILLTLFGLLCGASVGREGPTVQIGASIM 118
           QGSGIPQAIAARHL D   R  L+SLR+AAGKI LT+ GL CGAS+GREGPTVQ+GAS+M
Sbjct: 93  QGSGIPQAIAARHLRDDDDRSHLLSLRLAAGKIALTIVGLFCGASIGREGPTVQVGASLM 152

Query: 119 FALGRF 124
               R+
Sbjct: 153 LQAARW 158


>PM1417 [P] COG0038 Chloride channel protein EriC Pmu Pasteurella multocida
          Length = 456

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 5/127 (3%)

Query: 7   VGAAAVAL-----AQLADLAQIAFGAVVSHFQYASLMLTPAGFALSVFLTNRFFQNAQGS 61
           +GAA VAL     A+LADL         + +     ++ P+G AL  + T ++     GS
Sbjct: 37  IGAALVALFSLGFAKLADLGLEWNAHWSAQYPLTVWLVLPSGLALLAWFTAKYTPYVAGS 96

Query: 62  GIPQAIAARHLTDQTARESLVSLRVAAGKILLTLFGLLCGASVGREGPTVQIGASIMFAL 121
           GIPQ IAA  L     +  LV+      KI LT   +L GASVGREGP+VQ+GA++M A 
Sbjct: 97  GIPQVIAAISLPHGNNKSRLVAFWQTLWKIPLTFLAMLIGASVGREGPSVQVGAAVMLAW 156

Query: 122 GRFSPRR 128
           G    ++
Sbjct: 157 GNLCRKK 163


>NMB2006 [P] COG0038 Chloride channel protein EriC Nme Neisseria
           meningitidis MC58
          Length = 469

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 67/128 (52%)

Query: 1   LLGGIAVGAAAVALAQLADLAQIAFGAVVSHFQYASLMLTPAGFALSVFLTNRFFQNAQG 60
           L G   V   A+  A LAD A      +V  + + + +  P G  L  +LT +F     G
Sbjct: 30  LAGSALVALTALFFAHLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAG 89

Query: 61  SGIPQAIAARHLTDQTARESLVSLRVAAGKILLTLFGLLCGASVGREGPTVQIGASIMFA 120
           SGIPQ IA+  L     +  L+ L     KI LT  G+L GAS+GREGP+VQ+GA++M A
Sbjct: 90  SGIPQVIASLSLPYGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGA 149

Query: 121 LGRFSPRR 128
            G +  + 
Sbjct: 150 WGAWCKKH 157